Dear Stefanie,

What type of pathology are we discussing? What ages? What MRI sequence and resolution?

Cheers,

/Eugenio

--

Juan Eugenio Iglesias

http://www.jeiglesias.com

From: Stefanie Bradley <stefanie.bradley@mail.utoronto.ca>
Date: Tuesday, July 1, 2025 at 5:49 PM
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: [Freesurfer] Recon-all clinical vs. FS version 8.0.0

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Hi there,

I am analyzing some pediatric brains with clinical pathology, and I was wondering if I would expect a difference in the reconstructions from regular recon-all (Freesurfer version 8.0.0) vs. recon-all clinical, since they both use SynthSeg from what I understand?

Thanks,

Stefanie