Hello,

I need to process a good few thousand T1 images on a machine that I can’t store all the data on. I’d like to transfer as few files as possible to the processing machine so that I can perform longitudinal processing. I have successfully longitudinally processed some patients with a sub set of their data but others seem to hang (the template looks ok) during mri_ca_label. Is there a list of the minimum files that I’d need to perform longitudinal processing? The files I’ve had some success with are below:

 

 

/mri/orig/001.mgz

/mri/norm.mgz

/mri/wm.mgz

/mri/aseg.auto_noCCseg.mgz

/mri/rawavg.mgz

/mri/orig.mgz

/mri/brainmask.mgz

/mri/aseg.mgz

 

 

Thanks

Trev

 

Dr. Trevor Ahearn

Principal Physicist (MRI)

NHS Grampian