Thank you, Douglas, for your fast reply. I have used -3T option for all my dataset (>80 subject so far) and it worked well for all except for this subject. Do you generally discourage using this option? I thought it does some normalization/denoising for 3T scanners. I haven’t had a chance to look deeper into it. Please let me know what you think about it?

Thank you!

Meena

On Wed, Nov 20, 2019 at 5:51 PM Greve, Douglas N.,Ph.D. <DGREVE@mgh.harvard.edu> wrote:

This is something that is being triggered by use -3T. Is there a reason
you are using that option?

On 11/19/19 5:15 PM, Meena M. Makary wrote:
>
> External Email - Use Caution
>
> Hi,
>
> I have been getting this error with one of my subjects Recon-all. I am
> attaching the recon-all log file. any help would be appreciated!
>
> Meena
>
> --
> —
> *Meena M. Makary, Ph.D.*
> Assistant Professor|Cairo University <http://bmes.cufe.edu.eg/>
> Postdoctoral Fellow|Radiology, Harvard Medical School
> <https://connects.catalyst.harvard.edu/Profiles/display/Person/176550>
> Postdoctoral Fellow| Athinoula A. Martinos Center, MGH
> <https://www.nmr.mgh.harvard.edu/user/4550386>
> Career Development and Mentoring Manager | OHBM Student and Postdoc
> SIG <https://www.humanbrainmapping.org/i4a/pages/index.cfm?pageid=3449>
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Meena M. Makary, Ph.D.

Assistant Professor | Cairo University

Postdoctoral Fellow | Radiology, Harvard Medical School

Postdoctoral Fellow | Athinoula A. Martinos Center, MGH

Career Development and Mentoring Manager | OHBM Student and Postdoc SIG