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Dear FreeSurfer Developers,
I am processing MRI data using the freesurfer processing stream with two timepoints. I already executed the individual freesurfer-processing for each subject and timepoint and also the recon-all -base step. All finished without errors.
When running the recon-all -long command, the processing stream exits at the same step in the script for all subjects and timepoints. I cannot identify a particular error message (ony at the end the script says exited with errors and no stats files are produced).
 I am using freesurfer 7.1.1 on an iMAc with macOS Catalina.
Please find attached the recon-all log files for the longitudinal streams (2 folders with “long” in the foldername) as well as for the preparation steps.


Thank you.
 
 

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PD Dr. med. Susanne Gellißen

Department of Diagnostic and Interventional Neuroradiology
University Medical Center Hamburg-Eppendorf
Martinistraße 52, 20246 Hamburg
E-mail: s.siemonsen@uke.de



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