Hi FreeSurfer,

I am running trac-all prepocessing using a configuration file. I tried preprocessing a couple of participants, and I keep getting this error:

#-------------------------------------

#@# Tensor fit Sat Apr 11 21:29:36 PDT 2020

dtifit -k /Volumes/HuaExternal/DTI_FS/S11018a_LGI/dmri/dwi.nii.gz -m /Volumes/HuaExternal/DTI_FS/S11018a_LGI/dlabel/diff/aparc+aseg_mask.bbr.nii.gz -r /Volumes/HuaExternal/DTI_FS/S11018a_LGI/dmri/bvecs -b /Volumes/HuaExternal/DTI_FS/S11018a_LGI/dmri/bvals -o /Volumes/HuaExternal/DTI_FS/S11018a_LGI/dmri/dtifit

libc++abi.dylib: terminating with uncaught exception of type std::logic_error: Mat::operator(): index out of bounds

Abort 

This is my configuration file:

set dtroot = /Volumes/HuaExternal/DTI_FS

set subjlist = ( S11018a_LGI )

set dcmroot = /Volumes/HuaExternal/DTI

set dcmlist = ( S11018a.nii )

set bvecfile = /Volumes/HuaExternal/DTI/bvecsSPACE.txt

set bvalfile = /Volumes/HuaExternal/DTI/bvals.txt

set runlist = (1)

set doeddy = 1
set ncpts = (6 6 5 5 5 5 7 5 5 5 5 5 4 4 5 5 5 5)

Do you know what is going wrong, and how I would fix this issue?

Best,

 Jessica