Dear Bruce,

I try to execute this command to smooth and resample data but I have one message of error:

mri_surf2surf --srcsubject s000_open_brain_sanlm_+TIR_normlalized --srcsurfval curv --src_type curv --trgsubject avg_all_subjects_SD --trgsurfval curv --hemi lh --fwhm-src 15 --trg_type smoothed.source.15

the error is: ERROR: could not determine type of curv

thank you for your help,

With best regards,

Fatma


2013/7/29 Bruce Fischl <fischl@nmr.mgh.harvard.edu>
can you cc the list so that others can answer or see the answer? You need to specify the source and target subjects with --srcsubject and --trgsubject


cheers
Bruce


On Mon, 29 Jul 2013, fatma zribi wrote:

mri_surf2surf --hemi lh --s s000_open_brain_sanlm_+TIR_normlalized --sval curv --src_type curv --fwhm 10 --trg_type curv --tval
curv.10


2013/7/29 Bruce Fischl <fischl@nmr.mgh.harvard.edu>
      what is your full command line? You can smooth and map with it (use -fwhm-src or fwhm-trg to smooth in either the
      source or target space)
      On Mon, 29 Jul 2013, fatma zribi wrote:

            Dear Bruce,
            I have tried mri-surf2surf, it makes the result (smoothed curv for example) with the same dimension of
            the subject. But I would
            like a smoothed file with the dimesion of fsaverage.

            Thank you for your help.

            With best regards,

            Fatma


            2013/7/29 Bruce Fischl <fischl@nmr.mgh.harvard.edu>
                  Hi Fatma

                  you can use mri_surf2surf within subject I believe, but Doug can confirm (although he's traveling
            so it may be a
                  bit). You can also do it interactively in tksurfer.

                  cheers
                  Bruce


                  On Mon, 29 Jul 2013, fatma zribi wrote:

                        Dear Bruce,

                        Would you mind tell me if there is a function of freesurfer  that I can use to do the same
            step of
                        qcache to smooth and
                        interpolate in the fsaverage one subject
                        with mri_surf2surf I can smooth only or align one subject with an average.
                        thank you for you help.
                        with best regards,
                        Fatma 




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