How are you checking the vertex coordinates? You can't use SPM, you'll
have to use tkmedit or freeview

On 04/04/2014 04:04 PM, Cherisse Onuigbo wrote:
> My mask is a volume mask. When I run the function normally, the
> vertices that are in the text file do not fall in the region of my mask.
> On Friday, April 4, 2014 2:28 PM, Douglas N Greve
> <greve@nmr.mgh.harvard.edu> wrote:
>
> Hi Cherisse, i don't understand what you have done. Is the mask a volume
> mask or surface mask? In mri_cor2label, you can specify a surface to get
> surface vertex numbers.
>
> doug
>
> On 04/02/2014 07:03 PM, Cherisse Onuigbo wrote:
> > Hello
> >
> > I was wondering how to create a label from a binary mask. I created a
> > mask and then normalized it to the template space. When I tried to use
> > mri_cor2vol, all the vertex numbers come out as -1. I understand that
> > the vertex numbers should come out as -1, but when I entered the
> > coordinates in the display function in spm, it was not in the region.
> >
> > Thank you,
> > Cherisse
>
> >
> >
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> --
> Douglas N. Greve, Ph.D.
> MGH-NMR Center
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