Hello, experts:

I have finished autorecon1-3 on the data. But now when I am examining the data, some images need skull stripping and white matter editing. So I need to rerun the steps.

If I strip the skull after autoreon1 and want to put it to autorecon2,
This should be: recon-all ?Cs <participants> -autorecon2

And after fixing white matter problem from autorecon2
This should be: recon-all ?Cs <participants> -autorecon3

All the old files will be automatically overwritten?
What is the most efficient way to redo the analysis after recon-all?



Thanks  a lot!

Karl

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