Hi Prasser:

Did you set the environment for MATLAB e.g.,

setenv MATLABPATH /Applications/MATLAB_version setenv PATH ${MATLABPATH}/bin:${PATH}

This is required for FS to source MATLAB.

best,

Alan

On Thu, Sep 29, 2016 at 6:46 PM, prasser <prasser@zoho.com> wrote:

Hi, Reposting. Thanks.

---- On Tue, 27 Sep 2016 16:53:21 -0700 prasser<prasser@zoho.com> wrote ----

Hi,

I'm looking to please get some help with -lgi.

I'm using matlab R2015b and FS5.3 with
recon-all -s subj_id -lgi
on os x 10.11.

Looking at the output, the first error occurs about here:

preparing pial mesh structure ...
...searching for mesh edges...done (206.94 sec).
... creating path file for vertex 1 / 65274
area file for outer ROIs saved at 1
In an assignment  A(:) = B, the number of elements in A and B must be the same.

Error in dsearchn (line 79)
        [d(i),t(i)] = min(sum((x-yi).^2,2));

I have changed the script SearchProjectionOnPial.m as suggested on the ReleaseNotes page.

Any help would be much appreciated.

Thanks.

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Alan N. Francis PhD
Instructor - Imaging Neuroscience
Brain Imaging Center

McLean Hospital

Harvard Medical School
115 Mill Street, Belmont, MA 02478
alanf@bwh.harvard.edu

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