Hi Julia, this is a bug. We've fixed it in our development version, but for you there are a few option. One is that you can just get the value from aseg.stats (asegstats2table). Or you can run recon-all with these flags -talairach -parcstats -parcstats2 -parcstats3

On 12/29/2020 7:34 AM, Julia Lam wrote:
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Dear all,

I received values of 0.0 on variables BrainSegVolNotVent and eTIV when running aparcstats2table on volumes where I've added control points. However, when aseg2stats was used, the variable EstimatedTotalIntraCranialVol was different from 0 on all, including the edited ones. Why is that? 

I've attached the logfile from one of the subjects where I used control points. 

I really appreciate any help you can provide.

Yours sincerely
Julia Lam




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