In general, the FS license is very general, so I imagine that you can use it with your project. You can get centroids from aseg segmentations with mri_segcentroids


On 6/17/2020 11:02 PM, Chen Yu wrote:

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Hello, I found FreeSurfer can segment brain areas automatically these days, and it really meets my requirements. therefore, this tool is really useful for me! But this process is only a part of my work, and I notice FreeSurfer isn't designed for third-party usage.
Otherwise, I still want to enroll this function in my project. Could you please tell me if I can import Freesurfer to my project and how. Or how to get the result coordinate data of brain parcellation so that I can locate the position of a specific area(just like 'aseg.mgz' file do)?
Looking forward to hearing from you!
 
sincerely
Fritz.

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