I guess doing it in matlab would be easiest

 

From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> On Behalf Of Hye Min Shin
Sent: Friday, June 25, 2021 1:24 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] Calculating group-wise Dice Similarity Coefficient and corresponding surface map

 

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Thank you for the response Bruce. 

 

I apologize for the confusion regarding surface map but what I was trying is that I wanted to create a surface file that contains dice coefficients for labels across the entire cortex. With your response, I think I can get the average dice coefficient for each label and hopefully create a surface map that visualizes dice coefficients on brain surface map. 

 

Would there be a way to create my own surface map with brain morphometry values that I created? 

 

Best,

Julia Shin 

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