please send the fsgd file. Also, send the full text output from mri_glmfit


On 4/3/18 5:49 AM, Dijkshoorn, A.B.C. (Aicha) wrote:
Dear free surfer developers,

When I try to run the  mri_glmfit free surfer does not seem to recognise my FSGD file. I believe it has something to do with the underlying languages, since it appears to occur both when I create a plain txt file or when I adjust the tutorials gender_age.fsgd and adjust the values of the covariates. I have tried tons of things to fix the problem, but i can't seem to figure it out... 
Do you by any chance have an idea on how I can fix this? 


error (in bash):  ERROR: matrix is ill-conditioned or badly scaled, condno = 15250.9
command line:   mri_glmfit --y lh.CB10.thickness.20.mgh --fsgd doesnotworkretestCB10.fsgd doss --C con-hem.mtx --surf fsaverage lh --cortex --glmdir lh.CB10.20.thickness.glmdir   
Thank you in advance for your time and effort!

Kind regards,
A. Dijkshoorn





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