Hi all,

I am trying to extract LGI measures as prescribed in MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be https://surfer.nmr.mgh.harvard.edu/fswiki/LGI

So I follow this: 

mri_segstats --annot my_subject_id lh aparc --i $SUBJECTS_DIR/my_subject_id/surf/lh.pial_lgi --sum lh.aparc.pial_lgi.stats

but receive this error (I have also tried in root): 

7.1.0

cwd 

cmdline mri_segstats --annot 10100_S2654UFQ/ lh aparc --i /mnt/V/Datasets/BSNIP2/Processing/temp/10100_S2654UFQ/surf/lh.pial_lgi --sum lh.aparc.pial_lgi.stats 

sysname  Linux

hostname Alpha

machine  x86_64

user     victor

whitesurfname  white

UseRobust  0

Constructing seg from annotation

Reading annotation /mnt/V/Datasets/BSNIP2/Processing/temp/10100_S2654UFQ//label/lh.aparc.annot

reading colortable from annotation file...

colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt)

Seg base 1000

error: No such file or directory

error: CTABwriteFileASCII(/tmp/mri_segstats.tmp.10100_S2654UFQ/.lh.176.ctab): could not open for writing

error: No such file or directory

error: CTABreadASCII(/tmp/mri_segstats.tmp.10100_S2654UFQ/.lh.176.ctab): could not open file

ERROR: reading /tmp/mri_segstats.tmp.10100_S2654UFQ/.lh.176.ctab

Is this something that I can fix? 

Victor Zeng

Beth Israel Deaconess Medical Center

Keshavan Lab

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