Hi,
I am a beginner to freesurfer.
Currently I am working on some dicoms from ADNI that I want to preprocess using autorecon1.
But I am getting this 'talairach_afd: Talairach Transform: transforms/talairach.xfm ***FAILED*** ' error. Also I am using v6.0.0.
If I use the -notal-check flag, at/after the skull stripping stage I get continuous messages of this sort for different coordinates:
left/right detection failed, moving y coord to -2147483638 from -2147483648
I am attaching the error log for your reference without the -notal-check flag.
Please help me out.
Regards,
Chhavi