Do you mean from the mri_gtmpvc command line? There is not. The value you want will be stored in aux/global.gmwmcsf.dat, so, once you had that value, you could rescale the values in the .dat file

On 5/20/2020 3:33 PM, Vicky Shi wrote:

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Dear Freesurfer experts,

I am using gtm.stats.dat file generated by command mri_gtmpvc. I want it scaled by the mean intensity of whole brain. Is there an easy way to achieve this?

Thank you in advance for your help.

Best regards,

Vicky
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