Can you add those options as shown in the output ‘-fix-ento-wm -transfer-base-bfs -fix-vsinus -fix-mca-dura -fix-ga -fix-acj -synthstrip -synthseg -synthmorph’?

 

From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> On Behalf Of ???
Sent: Wednesday, December 11, 2024 11:53 AM
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] Freesurfer v8.0.0 error

 

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Hello FreeSurfer Developers,

I installed freesurfer 8.0.0 successfully but failed to run "recon-all -i *** -s *** -all -localGI -qcache" for any subjects. I tried this version 8.0.0beta on both macos latest version and ubuntu 22.04, the error was the same as follows:  

"Adding options -fix-ento-wm -transfer-base-bfs -fix-vsinus -fix-mca-dura -fix-ga -fix-acj -synthstrip -synthseg -synthmorph" "ERROR: cannot use ML routines"

The command line did not even start anything, thus no log file was generated.

I've searched the list and no similar errors have been reported. Does anyone have any thoughts on how to trouble-shoot this one? 

 

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