Peter Bohn <bohn-peter@gmx.de> wrote:

Thanks a lot! Do I have to repeat creating the base and the longitudinal runs once I use the new version or are they compatible concerning this aspect?

Thank you very much!

Best regards

Peter
From: mreuter@nmr.mgh.harvard.edu
Date: Thu, 20 Jun 2013 02:46:05 -0700
To: bohn-peter@gmx.de; freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] long_mris_slopes/long_qdec_table command not found

Yes, those scripts are available since 5.2. You need to update to a newer version.
Best Martin
Peter Bohn <bohn-peter@gmx.de> wrote:
Hi Martin,

thanks a lot fort he quick reply! When I type freesurfer into the window it shows me v5.0.0 as the version. Sorry for my prior mistake 
concerning the version’s name. All other commands I use run perfectly fine.

Thanks once again!

Best regards

Peter 
From: mreuter@nmr.mgh.harvard.edu
Date: Thu, 20 Jun 2013 05:21:39 -0400
To: bohn-peter@gmx.de
CC: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] long_mris_slopes/long_qdec_table command not found

Hi Peter,

can you run any free surfer command at all? Looks to me that you did not source free surfer. What happens if you type
freesurfer
into the terminal window? It should print the version.

Best, Martin
On Jun 20, 2013, at 5:17 AM, Peter Bohn <bohn-peter@gmx.de> wrote:
Dear Freesurfer experts,

I was trying to run some longitudinal analysis but whenever I want to use the commands “long_mris_slopes” or “long_qdec_table” I just get 
“command not found” as an answer. When I try to look up a package that might include the command, by typing “cnf long_mris_slopes”, 
I also just get “command not found” as an answer. We are currently using version v 1.313.2.6.

Does anyone of you know if the two commands that I would like to run, are included in this version? Where would I have to look for the 
additional package if it exists? Or am I by any chance just typing the commands incorrect?

Many thanks for the help!

Sincerely yours

Peter
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---------------------------------
Dr. Martin Reuter
Assistant in Neuroscience - Massachusetts General Hospital
Instructor in Neurology - Harvard Medical School
MGH / HMS / MIT

A.A.Martinos Center for Biomedical Imaging
149 Thirteenth Street, Suite 2301
Charlestown, MA 02129

Phone: +1-617-724-5652
Email:
mreuter@nmr.mgh.harvard.edu
reuter@mit.edu
Web : http://reuter.mit.edu
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