Hi there:

As of now, FreeSurfer does not parcellate the cerebellar vermis. It gives you 4 measurements of the cerebellum (Left total, left WM, Right total and right WM).

There is a toolbox called SUIT that works within SPM 8 that can accomplish this for you. See details at the website below:

http://www.icn.ucl.ac.uk/motorcontrol/imaging/suit.htm

best,

Alan Francis


On Tue, Jul 15, 2014 at 8:53 AM, Sarosh, Cyrus <csarosh@med.umich.edu> wrote:

We are interested in using the Cerebellar vermis for an analysis with our PET data. Is the cerebellar vermis segmented during the FreeSurfer pipeline analysis? If it is, which file is it located in or how can I export a nifti file containing this segmentation?

 

Thanks,

 

Cyrus Sarosh

Description: Description: Description: Description: Description: Description: Description: cid:image002.png@01CC3BB7.F8D9A990

Research Technician Senior

Department of Radiology

Functional Neuroimaging, Cognitive and Mobility Laboratory

 

 

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