It looks like you made some manual edits, then re-ran recon-all, but did not do so fully (eg, used autorecon2 but not autorecon3). Does this make sense?

On 4/20/2021 4:35 AM, 林鈺庭 wrote:

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Dear FreeSurfer Developers:

We analyzed MRI T1 image data on freesurfer and encountered some difficulty, could you help us with this? The recon-all.log file is already attached in this email in case you need it. We thank you in advance.

FreeSurfer version: freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c

program versions used:$Id: recon-all,v 1.379.2.17 2011/05/20 22:48:18 nicks Exp $

Best regards,
Josephine
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