Probably not because of the voxel size. First, check the
registration. If it looks ok, then you can re-run with
-no-talcheck. If it does, not look good, then fix it and rerun.
Dear experts, I am sorry for asking again.
I have some problems in running recon-all.
Recon-all process was shut down with this error message
ERROR: talairach_afd: Talairach Transform: transforms/talairach.xfm ***FAILED*** (p=0.0000, pval=0.0000 < threshold=0.0050)
Manual Talairach alignment may be necessary, or
include the -notal-check flag to skip this test,
making sure the -notal-check flag follows -all
or -autorecon1 in the command string."
I guess this is because of low resolution or small size of images.
is it right? Thank you so much for you help in advance.
FYI, log file is attached.
Kyung
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer