Hi Brooklyn,

Can you check your recon-all command? Can you attach the recon-all.log?

From your message, it reads “recon-al1 -s cor 15”.  It should be recon-all. There is also a space in your subject name.

Best,

Yujing

From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> On Behalf Of Brooklyn Wright
Sent: Wednesday, January 4, 2023 9:17 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] mri_segstats error:

        External Email - Use Caution        

Hello Freesurfer Developers,

I am currently trying to perform reconstructions on 1mm^3 T1 data and am finding this error towards the end of the processing;

\n mri brainvol _stats cor. 15 \n

Segmentation fault

Darwin UW-C02L2083DNMP 18.7.0 Darwin Kernel Version 18.7.0: Tue Jun 22 19:37:08 PDT 2021; root:xnu-4903.278.79-1/RELEASE_X86_ 64 x86_64

recon-al1 -s cor 15 exited with ERRORS at Tue Dec 20 11:16:05 AEDT 2022

Do you know why this is happening and how to fix this?

Kindest,

Brooklyn.