Looks like it downloaded fine. In that case, just move that file to your FS install:

mv fs_install_mcr $FREESURFER_HOME/bin

and you should be good to go.

Best

Andrew

From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Georgia Kapizioni <geo.kapizioni@gmail.com>
Date: Monday, March 1, 2021 at 10:57 AM
To: freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] Matlab version 2012b installation problem

        External Email - Use Caution        

Hello Andrew,

Thank you so much for your response.

Here is the output when running the command you suggested:

Georgias-MacBook-Pro:~ georgina$ curl MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be https://raw.githubusercontent.com/freesurfer/freesurfer/dev/scripts/fs_install_mcr -o fs_install_mcr

  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current

                                 Dload  Upload   Total   Spent    Left  Speed

100  2010  100  2010    0     0   8170      0 --:--:-- --:--:-- --:--:--  8137

(base) Georgias-MacBook-Pro:~ georgina$ ls fs_install_mcr

fs_install_mcr

I assume, it didn’t download it, right?

Georgia

On 26 Feb 2021, at 8:03 PM, Georgia Kapizioni <geo.kapizioni@gmail.com> wrote:

Hello Andrew,

Please accept my apologies for such a detailed response, I had a health issue, and I was just able to test what you suggested.

When I use the wget command, again I have an error: -bash: wget: command not found

Any ideas on how to overcome this issue?

Thank you once again,

Best,

Georgia 

On 9 Feb 2021, at 5:49 PM, Georgia Kapizioni <geo.kapizioni@gmail.com> wrote:

Hello Andrew,

Thank you for your response!

The output of the first command (meaning sudo cd $FREESURFER_HOME/bin && curl MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be https://raw.githubusercontent.com/freesurfer/freesurfer/dev/scripts/fs_install_mcr -o fs_install_mcr && chmod +x) was:

 % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current

                                 Dload  Upload   Total   Spent    Left  Speed

100  2010  100  2010    0     0   5275      0 --:--:-- --:--:-- --:--:--  5261

usage: chmod [-fhv] [-R [-H | -L | -P]] [-a | +a | =a  [i][# [ n]]] mode|entry file ...

chmod [-fhv] [-R [-H | -L | -P]] [-E | -C | -N | -i | -I] file …

However, when I type: ls -l $FREESURFER_HOME/bin/fs_install_mcr as you suggested, it appears ls: /Applications/freesurfer/bin/fs_install_mcr: No such file or directory

When I type again fs_install_mcr while being in Freesurfer/bin path again fs_install_mcr: command not found appears.

Any idea what went wrong?

Thanks once again,

Best,

Georgia

On 9 Feb 2021, at 1:05 AM, Georgia Kapizioni <geo.kapizioni@gmail.com> wrote:

Dear Freesurfer experts, 

I am trying to install Matlab version 2012b but a message appears: command not found. 

Firstly, I ran: sudo cd $FREESURFER_HOME/bin && curl MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be https://raw.githubusercontent.com/freesurfer/freesurfer/dev/scripts/fs_install_mcr -o fs_install_mcr && chmod +x 

Then I typed: fs_install_mcr R2012b and I receive: command not found. 

My FS version is 6 and I have already install Matlab2016_b on my Mac. 

Could you please help me resolve this issue? 

Thank you in advance,

Georgia