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Hello Vasudev,

With the 6.0 source, you can use options to the configure command to point to a coda distribution and try to build freesurfer.  See the post by user buildqa at this link, https://github.com/freesurfer/freesurfer/issues/107#issuecomment-388712794 followed by the posts from user melrobin.  User melrobin reported he was able to get it to work with coda 9.1.

- R.


On Sep 30, 2019, at 09:57, Dev vasu <vasudevamurthy.devulapally@gmail.com> wrote:

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Dear HCP team ,

Could you please let me know how i can configure CUDA 9.1 with freesurfer 6.0 or Freesurfer 5.3.0 -HCP

It is taking a long time by using openmp to run recon-all.

please let me know if you have any suggestions for parallelization.


Thanks
Vasudev
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