Dear Antonio,

NextBrain provides the ICV via SynthSeg 😉

Cheers,

/Eugenio

--

Juan Eugenio Iglesias

http://www.jeiglesias.com

From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Antonio Napolitano <antonio.napolitano@gmx.com>
Date: Wednesday, February 12, 2025 at 2:42 PM
To: freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edu>
Subject: [Freesurfer] histo atlas and sTIV

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Dear Freesurfer experts, 

I have run nextbrain but I am not sure whether it is possible to have the sTIV. 

Please, I would need to know how I can compute: 

1) histo atlas segmentation with the newest version of Nextbrain along with segmentation-based total intracrainial volume (sTIV)

which commands shall I use? running all recon-all for that?

Thanks 

Regards

Antonio

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