I'm attaching my trac-all file for check.<div>Thanks,</div><div><br></div><div>Stefano<br>
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----Messaggio originale----<br>
Da: stdp82@virgilio.it<br>
Data: 11-feb-2013 14.42<br>
A: &lt;freesurfer@nmr.mgh.harvard.edu&gt;<br>
Cc: &lt;ayendiki@nmr.mgh.harvard.edu&gt;<br>
Ogg: [Freesurfer] trac-all -path error<br>
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Hi list,<div><br></div><div>I'm running trac-all -path -c $FREESURFER/dmrirc_single_subject but I have this error:</div><div><br></div><div>Loading mask from /Applications/freesurfer/subjects/subject_prova/Con02/dlabel/diff/aparc+aseg_mask.bbr.nii.gz</div><div>Loading BEDPOST parameter samples from /Applications/freesurfer/subjects/subject_prova/Con02/dmri.bedpostX</div><div>niiRead(): error opening file /Applications/freesurfer/subjects/subject_prova/Con02/dmri.bedpostX/merged_ph1samples.nii.gz</div><div>ERROR: Could not read /Applications/freesurfer/subjects/subject_prova/Con02/dmri.bedpostX/merged_ph1samples.nii.gz</div><div><br></div><div>From&nbsp;http://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg22066.html&nbsp;</div><div>I'm deducing that the error may be related trace-all upload.</div><div><br></div><div>I have doing this upload but I visualize always the same error.</div><div><br></div><div>I attached tract-all uploades file that live in /Applications/freesurfer/bin.</div><div><br></div><div>Please, could you check it?</div><div><br></div><div>I have also other question. May I run the second step of trac-all (bedpostx) using FSL on other pc? In this way, could I directly run in FSL dmri folder? Do you think that I should rename some files?</div><div><br></div><div>Thanks,</div><div><br></div><div><br></div><div>Stefano</div><br>
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