Hello Freesurfer experts - raising this question once more. Also if I downloaded a trial version of Matlab to see how it integrates, but am unable to activate it. Anyone with similar issues? When I run my recon-all - lgi command, it starts up and fails with an error that MATLAB has a licensing error: 4410. Invalid security token. I would really appreciate some help!

Thanks in advance!

On Thu, Mar 3, 2016 at 11:40 PM Ankita Chatterjee <achat04@gmail.com> wrote:

Hello,
I ran several recon-all processes on raw T1 MRI data. I was trying to run recon-all -lgi as per the instructions from this paper - http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3369773/ but it fails with an error that Matlab is required. So, my question is if local GI is already computed by running recon-all? Or, do I need to get MatLab? Since I don't have MatLab, any other workarounds?

Thanks!

Ankita