We don't have a centrum semiovale label in FS. You could try using the (Left,Right)-UnsegmentedWhiteMatter in the wmparc.mgz

On 11/27/2020 9:28 AM, miracle ozzoude wrote:

        External Email - Use Caution        

Hello Experts, 

I did like to create a mask for basal ganglia, deep grey matter, and centrum semiovale. I know how to extract the mask for the first 2 (using aseg.mgz) however, how do I extract the last one. What mask should I use to extract the centrum semiovale? I don't want to include the cerebellar white matter. 

Thanks. 

Best, 
Paul

_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer