------ Original Message ------

Date: Wednesday, May 24, 2017 01:48:33 PM
From: "Gwang-Won Kim" <kw0212@nate.com>
To: <freesurfer@nmr.mgh.harvard.edu>
Subject: Question: how to smooth and transform into a template

Hello FreeSurfer Developers,

I read a sentence in a paper associated with Free Surfer as following: Before statistical evaluation, cortical thickness maps were smoothed with Gaussian Kernel (10 FWHM).

That mean "Smooth2 (?h.smoothwm)" in individual steps, is it right?

Please, tell me how to smooth by a Gaussian Kernel of 10 FWHM.

 

In addition, I read a sentence as following: To compare cortical thickness between groups, the cortical surfaces of all subjects were transformed into a group template surface space.

Please, tell me how to transform into a group template surface space.

 

1) FreeSurfer version: 6.0

2) Platform: CentOS release 6.8