Hello!
I’m trying to use freeview to visualize FSPGR dicoms files.
I’m using ubuntu 18.04 with tcsh shell. I’m getting the following error:
sh: 1: Syntax error: Bad fd number
Here is the full error message:
Starting DICOMRead2()
dcmfile =~/Desktop/04254335/05641194
dcmdir = ~/Desktop/04254335
Ref Series No = 3
Found 200 files, checking for dicoms
Found 200 files, checking for dicoms
5
/05641194
Found 198 dicom files in series.
Found 198 dicom files in series.
oms
5
/05641194
First Sorting
Computing Slice Direction
Vs: 0 0 1
Vs: 0 0 1
Second Sorting
IsDWI = 0, IsPhilipsDWI = 0
Counting frames
nframes = 1
nslices = 198
ndcmfiles = 198
INFO: rescale not needed
PE Dir = ROW (dicom read)
Loading pixel data
JPEG compressed, decompressing
cd ~/Desktop
fsdcmdecompress --i ~/Desktop/04254335/05641194 --o /tmp/basuia.tmp.decompressed.dcm.yK9HZZ --jpeg >& /tmp/basuia.tmp.decompressed.dcm.yK9HZZ.dcmdjpeg.out
sh: 1: Syntax error: Bad fd number
ERROR: 512, see /tmp/basuia.tmp.decompressed.dcm.yK9HZZ.dcmdjpeg.out for more details
QObject::~QObject: Timers cannot be stopped from another thread
Thanks,
Noam