Hi all,<div>I am new to the freesurfer world.</div><div>I was running a pipeline where I met an error. Here is the command I run and the error message:</div><div><br></div><blockquote style="margin:0 0 0 40px;border:none;padding:0px">

<div><div>Command:</div></div><div><div>mri_vol2surf --hemi lh --noreshape --o /working_dir/SurfaceRegistration/_subject_id_sub/func_sampler_lh/mapflow/_func_sampler_lh4/lh.rest_mc.mgz --reg /working_dir/SurfaceRegistration/_subject_id_sub/func_bbreg/mapflow/_func_bbreg4/rest_mc_bbreg_sub.dat --projfrac 0.500 --mov /working_dir/SurfaceRegistration/_subject_id_sub/func_volreg/mapflow/_func_volreg4/rest_mc.nii.gz</div>

</div><div><div>Standard output:</div></div><div><div>srcvol = /working_dir/SurfaceRegistration/_subject_id_sub/func_volreg/mapflow/_func_volreg4/rest_mc.nii.gz</div></div><div><div>srcreg = /working_dir/SurfaceRegistration/_subject_id_sub/func_bbreg/mapflow/_func_bbreg4/rest_mc_bbreg_sub.dat</div>

</div><div><div>srcregold = 0</div></div><div><div>srcwarp unspecified</div></div><div><div>surf = white</div></div><div><div>hemi = lh</div></div><div><div>ProjFrac = 0.5</div></div><div><div>thickness = thickness</div>
</div>
<div><div>reshape = 0</div></div><div><div>interp = nearest</div></div><div><div>float2int = round</div></div><div><div>GetProjMax = 0</div></div><div><div>INFO: float2int code = 0</div></div><div><div>INFO: changing type to float</div>

</div><div><div>Done loading volume</div></div><div><div>Reading surface /NKI_recon_subjects/sub/surf/lh.white</div></div><div><div>Done reading source surface</div></div><div><div>Reading thickness /NKI_recon_subjects/sub/surf/lh.thickness</div>

</div><div><div>Done</div></div><div><div>Mapping Source Volume onto Source Subject Surface</div></div><div><div> 1 0.5 0.5 0.5</div></div><div><div>using old</div></div><div><div>Done mapping volume to surface</div></div>

<div><div>Standard error:</div></div><div><div>Segmentation fault</div></div><div><div>Return code: 139</div></div><div><div>Interface SampleToSurface failed to run. </div></div></blockquote><div><br></div><div>Thank you all in advance!</div>

<div><br></div><div>Yang</div><div><br clear="all">------<br>Qingyang Li<br><br>Balance and focus.<br>
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