Stefano

----Messaggio originale----
Da: ayendiki@nmr.mgh.harvard.edu
Data: 27-dic-2013 16.51
A: <stdp82@virgilio.it>
Cc: <freesurfer@nmr.mgh.harvard.edu>
Ogg: Re: R: Re: [Freesurfer] Tracula -stat

Are you running this with only one subject? What are you trying to do? The
purpose of this step is to combine measures from multiple subjects.

On Fri, 27 Dec 2013, stdp82@virgilio.it wrote:

> I'm sorry and I'm attaching the files.Thanks,
>
> Stefano
>
>
> trac-all -stat -c $FREESURFER_HOME/Control01
> INFO: SUBJECTS_DIR is /Applications/freesurfer/subjects/subject_prova
> INFO: Diffusion root is /Applications/freesurfer/subjects/subject_prova
> Actual FREESURFER_HOME /Applications/freesurfer
> /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt
>
>
> cwd /Applications/freesurfer/subjects/subject_prova
> cmdline /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt
> sysname Darwin
> hostname iMac-di-Stefano.local
> machine x86_64
> user Stefano
> Base name of output files:
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt
> Text file with list of individual inputs:
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt.inputs.txt
> Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz
> Loading list of inputs from
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt.inputs.txt
> Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/lh.cst_AS_avg33_mni_flt/pathstats
> .byvoxel.txt
> Loading input reference volume from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz
> Loading affine registration from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat
> INFO: Sampling interval along path is 2.6465 voxels
> Writing mean path to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt.mean.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt.AD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt.RD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt.MD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt.FA.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt.AD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt.RD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt.MD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_flt.FA_Avg.txt
> Done in 0.799 sec.
> dmri_group done
> /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt
>
>
> cwd /Applications/freesurfer/subjects/subject_prova
> cmdline /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt
> sysname Darwin
> hostname iMac-di-Stefano.local
> machine x86_64
> user Stefano
> Base name of output files:
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt
> Text file with list of individual inputs:
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt.inputs.txt
> Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz
> Loading list of inputs from
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt.inputs.txt
> Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/rh.cst_AS_avg33_mni_flt/pathstats
> .byvoxel.txt
> Loading input reference volume from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz
> Loading affine registration from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat
> INFO: Sampling interval along path is 2.63906 voxels
> Writing mean path to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt.mean.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt.AD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt.RD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt.MD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt.FA.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt.AD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt.RD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt.MD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_flt.FA_Avg.txt
> Done in 0.317 sec.
> dmri_group done
> /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt
>
>
> cwd /Applications/freesurfer/subjects/subject_prova
> cmdline /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt
> sysname Darwin
> hostname iMac-di-Stefano.local
> machine x86_64
> user Stefano
> Base name of output files:
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt
> Text file with list of individual inputs:
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt.inputs.txt
> Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz
> Loading list of inputs from
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt.inputs.txt
> Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/lh.ilf_AS_avg33_mni_flt/pathstats
> .byvoxel.txt
> Loading input reference volume from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz
> Loading affine registration from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat
> INFO: Sampling interval along path is 2.21324 voxels
> Writing mean path to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt.mean.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt.AD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt.RD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt.MD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt.FA.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt.AD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt.RD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt.MD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ilf_AS.avg33_mni_flt.FA_Avg.txt
> Done in 0.307 sec.
> dmri_group done
> /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt
>
>
> cwd /Applications/freesurfer/subjects/subject_prova
> cmdline /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt
> sysname Darwin
> hostname iMac-di-Stefano.local
> machine x86_64
> user Stefano
> Base name of output files:
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt
> Text file with list of individual inputs:
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt.inputs.txt
> Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz
> Loading list of inputs from
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt.inputs.txt
> Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/rh.ilf_AS_avg33_mni_flt/pathstats
> .byvoxel.txt
> Loading input reference volume from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz
> Loading affine registration from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat
> INFO: Sampling interval along path is 2.10424 voxels
> Writing mean path to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt.mean.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt.AD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt.RD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt.MD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt.FA.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt.AD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt.RD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt.MD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ilf_AS.avg33_mni_flt.FA_Avg.txt
> Done in 0.269 sec.
> dmri_group done
> /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt
>
>
> cwd /Applications/freesurfer/subjects/subject_prova
> cmdline /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt
> sysname Darwin
> hostname iMac-di-Stefano.local
> machine x86_64
> user Stefano
> Base name of output files:
> /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt
> Text file with list of individual inputs:
> /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt.inputs.txt
> Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz
> Loading list of inputs from
> /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt.inputs.txt
> Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/lh.unc_AS_avg33_mni_flt/pathstats
> .byvoxel.txt
> Loading input reference volume from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz
> Loading affine registration from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat
> INFO: Sampling interval along path is 2.58957 voxels
> Writing mean path to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt.mean.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt.AD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt.RD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt.MD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt.FA.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt.AD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt.RD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt.MD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.unc_AS.avg33_mni_flt.FA_Avg.txt
> Done in 1.128 sec.
> dmri_group done
> /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt
>
>
> cwd /Applications/freesurfer/subjects/subject_prova
> cmdline /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt
> sysname Darwin
> hostname iMac-di-Stefano.local
> machine x86_64
> user Stefano
> Base name of output files:
> /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt
> Text file with list of individual inputs:
> /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt.inputs.txt
> Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz
> Loading list of inputs from
> /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt.inputs.txt
> Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/rh.unc_AS_avg33_mni_flt/pathstats
> .byvoxel.txt
> Loading input reference volume from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz
> Loading affine registration from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat
> INFO: Sampling interval along path is 2.21483 voxels
> Writing mean path to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt.mean.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt.AD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt.RD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt.MD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt.FA.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt.AD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt.RD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt.MD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.unc_AS.avg33_mni_flt.FA_Avg.txt
> Done in 0.36 sec.
> dmri_group done
> /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt
>
>
> cwd /Applications/freesurfer/subjects/subject_prova
> cmdline /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt
> sysname Darwin
> hostname iMac-di-Stefano.local
> machine x86_64
> user Stefano
> Base name of output files:
> /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt
> Text file with list of individual inputs:
> /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt.inputs.txt
> Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz
> Loading list of inputs from
> /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt.inputs.txt
> Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/fmajor_PP_avg33_mni_flt/pathstats
> .byvoxel.txt
> Loading input reference volume from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz
> Loading affine registration from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat
> INFO: Sampling interval along path is 2.32681 voxels
> Writing mean path to
> /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt.mean.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt.AD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt.RD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt.MD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt.FA.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt.AD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt.RD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt.MD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/fmajor_PP.avg33_mni_flt.FA_Avg.txt
> Done in 0.32 sec.
> dmri_group done
> /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt
>
>
> cwd /Applications/freesurfer/subjects/subject_prova
> cmdline /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt
> sysname Darwin
> hostname iMac-di-Stefano.local
> machine x86_64
> user Stefano
> Base name of output files:
> /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt
> Text file with list of individual inputs:
> /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt.inputs.txt
> Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz
> Loading list of inputs from
> /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt.inputs.txt
> Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/fminor_PP_avg33_mni_flt/pathstats
> .byvoxel.txt
> Loading input reference volume from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz
> Loading affine registration from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat
> INFO: Sampling interval along path is 2.13356 voxels
> Writing mean path to
> /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt.mean.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt.AD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt.RD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt.MD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt.FA.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt.AD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt.RD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt.MD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/fminor_PP.avg33_mni_flt.FA_Avg.txt
> Done in 0.273 sec.
> dmri_group done
> /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt
>
>
> cwd /Applications/freesurfer/subjects/subject_prova
> cmdline /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt
> sysname Darwin
> hostname iMac-di-Stefano.local
> machine x86_64
> user Stefano
> Base name of output files:
> /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt
> Text file with list of individual inputs:
> /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt.inputs.txt
> Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz
> Loading list of inputs from
> /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt.inputs.txt
> Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/lh.atr_PP_avg33_mni_flt/pathstats
> .byvoxel.txt
> Loading input reference volume from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz
> Loading affine registration from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat
> INFO: Sampling interval along path is 2.25399 voxels
> Writing mean path to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt.mean.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt.AD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt.RD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt.MD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt.FA.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt.AD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt.RD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt.MD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.atr_PP.avg33_mni_flt.FA_Avg.txt
> Done in 0.3 sec.
> dmri_group done
> /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt
>
>
> cwd /Applications/freesurfer/subjects/subject_prova
> cmdline /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt
> sysname Darwin
> hostname iMac-di-Stefano.local
> machine x86_64
> user Stefano
> Base name of output files:
> /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt
> Text file with list of individual inputs:
> /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt.inputs.txt
> Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz
> Loading list of inputs from
> /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt.inputs.txt
> Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/rh.atr_PP_avg33_mni_flt/pathstats
> .byvoxel.txt
> Loading input reference volume from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz
> Loading affine registration from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat
> INFO: Sampling interval along path is 2.18351 voxels
> Writing mean path to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt.mean.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt.AD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt.RD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt.MD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt.FA.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt.AD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt.RD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt.MD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.atr_PP.avg33_mni_flt.FA_Avg.txt
> Done in 0.298 sec.
> dmri_group done
> /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt
>
>
> cwd /Applications/freesurfer/subjects/subject_prova
> cmdline /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt
> sysname Darwin
> hostname iMac-di-Stefano.local
> machine x86_64
> user Stefano
> Base name of output files:
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt
> Text file with list of individual inputs:
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt.inputs.txt
> Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz
> Loading list of inputs from
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt.inputs.txt
> Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/lh.cab_PP_avg33_mni_flt/pathstats
> .byvoxel.txt
> Loading input reference volume from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz
> Loading affine registration from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat
> INFO: Sampling interval along path is 2.62361 voxels
> Writing mean path to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt.mean.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt.AD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt.RD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt.MD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt.FA.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt.AD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt.RD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt.MD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cab_PP.avg33_mni_flt.FA_Avg.txt
> Done in 0.293 sec.
> dmri_group done
> /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt
>
>
> cwd /Applications/freesurfer/subjects/subject_prova
> cmdline /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt
> sysname Darwin
> hostname iMac-di-Stefano.local
> machine x86_64
> user Stefano
> Base name of output files:
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt
> Text file with list of individual inputs:
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt.inputs.txt
> Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz
> Loading list of inputs from
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt.inputs.txt
> Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/rh.cab_PP_avg33_mni_flt/pathstats
> .byvoxel.txt
> Loading input reference volume from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz
> Loading affine registration from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat
> INFO: Sampling interval along path is 2.32551 voxels
> Writing mean path to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt.mean.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt.AD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt.RD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt.MD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt.FA.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt.AD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt.RD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt.MD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cab_PP.avg33_mni_flt.FA_Avg.txt
> Done in 0.27 sec.
> dmri_group done
> /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt
>
>
> cwd /Applications/freesurfer/subjects/subject_prova
> cmdline /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt
> sysname Darwin
> hostname iMac-di-Stefano.local
> machine x86_64
> user Stefano
> Base name of output files:
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt
> Text file with list of individual inputs:
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt.inputs.txt
> Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz
> Loading list of inputs from
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt.inputs.txt
> Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/lh.ccg_PP_avg33_mni_flt/pathstats
> .byvoxel.txt
> Loading input reference volume from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz
> Loading affine registration from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat
> INFO: Sampling interval along path is 2.30666 voxels
> Writing mean path to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt.mean.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt.AD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt.RD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt.MD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt.FA.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt.AD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt.RD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt.MD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.ccg_PP.avg33_mni_flt.FA_Avg.txt
> Done in 0.273 sec.
> dmri_group done
> /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt
>
>
> cwd /Applications/freesurfer/subjects/subject_prova
> cmdline /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt
> sysname Darwin
> hostname iMac-di-Stefano.local
> machine x86_64
> user Stefano
> Base name of output files:
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt
> Text file with list of individual inputs:
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt.inputs.txt
> Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz
> Loading list of inputs from
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt.inputs.txt
> Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/rh.ccg_PP_avg33_mni_flt/pathstats
> .byvoxel.txt
> Loading input reference volume from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz
> Loading affine registration from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat
> INFO: Sampling interval along path is 2.31858 voxels
> Writing mean path to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt.mean.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt.AD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt.RD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt.MD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt.FA.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt.AD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt.RD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt.MD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.ccg_PP.avg33_mni_flt.FA_Avg.txt
> Done in 0.28 sec.
> dmri_group done
> /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt
>
>
> cwd /Applications/freesurfer/subjects/subject_prova
> cmdline /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt
> sysname Darwin
> hostname iMac-di-Stefano.local
> machine x86_64
> user Stefano
> Base name of output files:
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt
> Text file with list of individual inputs:
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt.inputs.txt
> Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz
> Loading list of inputs from
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt.inputs.txt
> Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/lh.slfp_PP_avg33_mni_flt/pathstat
> s.byvoxel.txt
> Loading input reference volume from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz
> Loading affine registration from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat
> INFO: Sampling interval along path is 2.11608 voxels
> Writing mean path to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt.mean.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt.AD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt.RD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt.MD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt.FA.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt.AD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt.RD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt.MD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slfp_PP.avg33_mni_flt.FA_Avg.txt
> Done in 0.312 sec.
> dmri_group done
> /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt
>
>
> cwd /Applications/freesurfer/subjects/subject_prova
> cmdline /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt
> sysname Darwin
> hostname iMac-di-Stefano.local
> machine x86_64
> user Stefano
> Base name of output files:
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt
> Text file with list of individual inputs:
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt.inputs.txt
> Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz
> Loading list of inputs from
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt.inputs.txt
> Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/rh.slfp_PP_avg33_mni_flt/pathstat
> s.byvoxel.txt
> Loading input reference volume from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz
> Loading affine registration from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat
> INFO: Sampling interval along path is 2.3463 voxels
> Writing mean path to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt.mean.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt.AD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt.RD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt.MD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt.FA.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt.AD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt.RD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt.MD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slfp_PP.avg33_mni_flt.FA_Avg.txt
> Done in 0.274 sec.
> dmri_group done
> /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt
>
>
> cwd /Applications/freesurfer/subjects/subject_prova
> cmdline /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt
> sysname Darwin
> hostname iMac-di-Stefano.local
> machine x86_64
> user Stefano
> Base name of output files:
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt
> Text file with list of individual inputs:
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt.inputs.txt
> Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz
> Loading list of inputs from
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt.inputs.txt
> Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/lh.slft_PP_avg33_mni_flt/pathstat
> s.byvoxel.txt
> Loading input reference volume from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz
> Loading affine registration from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat
> INFO: Sampling interval along path is 2.15215 voxels
> Writing mean path to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt.mean.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt.AD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt.RD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt.MD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt.FA.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt.AD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt.RD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt.MD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.slft_PP.avg33_mni_flt.FA_Avg.txt
> Done in 0.306 sec.
> dmri_group done
> /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt
>
>
> cwd /Applications/freesurfer/subjects/subject_prova
> cmdline /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt
> sysname Darwin
> hostname iMac-di-Stefano.local
> machine x86_64
> user Stefano
> Base name of output files:
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt
> Text file with list of individual inputs:
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt.inputs.txt
> Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz
> Loading list of inputs from
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt.inputs.txt
> Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/rh.slft_PP_avg33_mni_flt/pathstat
> s.byvoxel.txt
> Loading input reference volume from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz
> Loading affine registration from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.flt.mat
> INFO: Sampling interval along path is 2.3093 voxels
> Writing mean path to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt.mean.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt.AD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt.RD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt.MD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt.FA.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt.AD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt.RD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt.MD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/rh.slft_PP.avg33_mni_flt.FA_Avg.txt
> Done in 0.31 sec.
> dmri_group done
> /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr
>
>
> cwd /Applications/freesurfer/subjects/subject_prova
> cmdline /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr
> sysname Darwin
> hostname iMac-di-Stefano.local
> machine x86_64
> user Stefano
> Base name of output files:
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr
> Text file with list of individual inputs:
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr.inputs.txt
> Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz
> Loading list of inputs from
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr.inputs.txt
> Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/lh.cst_AS_avg33_mni_bbr/pathstats
> .byvoxel.txt
> Loading input reference volume from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz
> Loading affine registration from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.bbr.mat
> INFO: Sampling interval along path is 2.49298 voxels
> Writing mean path to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr.mean.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr.AD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr.RD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr.MD.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr.FA.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr.AD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr.RD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr.MD_Avg.txt
> Writing group table to
> /Applications/freesurfer/subjects/subject_prova/stats/lh.cst_AS.avg33_mni_bbr.FA_Avg.txt
> Done in 0.376 sec.
> dmri_group done
> /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_bbr.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_bbr
>
>
> cwd /Applications/freesurfer/subjects/subject_prova
> cmdline /Applications/freesurfer/bin/dmri_group --list
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_bbr.inputs.txt --ref
> /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz --out
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_bbr
> sysname Darwin
> hostname iMac-di-Stefano.local
> machine x86_64
> user Stefano
> Base name of output files:
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_bbr
> Text file with list of individual inputs:
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_bbr.inputs.txt
> Loading output reference volume from /usr/local/fsl/data/standard/MNI152_T1_1mm_brain.nii.gz
> Loading list of inputs from
> /Applications/freesurfer/subjects/subject_prova/stats/rh.cst_AS.avg33_mni_bbr.inputs.txt
> Loading measures along the path from/Applications/freesurfer/subjects/subject_prova/Control01/dpath/rh.cst_AS_avg33_mni_bbr/pathstats
> .byvoxel.txt
> Loading input reference volume from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/dtifit_FA.nii.gz
> Loading affine registration from
> /Applications/freesurfer/subjects/subject_prova/Control01/dmri/xfms/diff2mni.bbr.mat
> Segmentation fault
>
>
>
>
> ----Messaggio originale----
> Da: ayendiki@nmr.mgh.harvard.edu
> Data: 27-dic-2013 13.50
> A: <stdp82@virgilio.it>
> Cc: <freesurfer@nmr.mgh.harvard.edu>
> Ogg: Re: [Freesurfer] Tracula -stat
>
> Hi Stefano - As always, it'll be impossible to guess what's causing the
> error without seeing at least the log from the command and the
> configuration file.
>
> a.y
>
> > Hi list,
> >
> > I'm performing -stat step but this command produces sementation fault
> > after loading affine registration .mat.
> > Thanks,
> >
> > Stefan
> > _______________________________________________
> > Freesurfer mailing list
> > Freesurfer@nmr.mgh.harvard.edu
> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>
>
>
> The information in this e-mail is intended only for the person to whom it is
> addressed. If you believe this e-mail was sent to you in error and the e-mail
> contains patient information, please contact the Partners Compliance HelpLine at
> http://www.partners.org/complianceline . If the e-mail was sent to you in error
> but does not contain patient information, please contact the sender and properly
> dispose of the e-mail.
>
>
>
>
>