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Hello FreeSurfer Developers,

 

I'm attempting to recon-all function (input file is sample-001.nii.gz), but for some of my subjects I get the following error when I run the recon-all command:

 

I've searched the list and no similar errors have been reported. Does anyone have any thoughts on how to trouble-shoot this one? Also, Ive attached the recon-all.log in case it's of any use. 

 

1) FreeSurfer version: freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0

2) Platform: Docker freesurfer/freesurfer tag 6.0 (maybe officialized 

3) recon-all.log: see attached

4) recon-all.error.log see attached

5) recon-all-status see attached

 

please help me...

 

Kyul