Here is the log files and all results for one subject as the attachments. I have run a lots of subjects and all result directories didn't include l(r)h.hippoSfLabels-T1.v10.mgz file.
At 2019-08-08 09:49:30, "Iglesias Gonzalez, Juan E." <JIGLESIASGONZALEZ@mgh.harvard.edu> wrote:
Dear Zheng,
Can you please send us the log files?
Kind regards,
/Eugenio
--
Juan Eugenio Iglesias
Senior research fellow
CMIC (UCL), MGH (HMS) and CSAIL (MIT)
http://www.jeiglesias.com
From: <freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of
郑凤莲 <zhengfenglian0105@163.com>
Reply-To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Date: Wednesday, 7 August 2019 at 21:19
To: "freesurfer@nmr.mgh.harvard.edu" <freesurfer@nmr.mgh.harvard.edu>
Subject: [Freesurfer] Hippocampal subfields
External Email - Use Caution
I am using FS6.0 to segment hippocampus. I run "recon-all -s bert -hippocampal-subfields-T1" and it said "recon all bert finished without error". However, in mri
directory, there is no l(r)h.hippoSfLabels-T1.v10.mgz file. And in tmp directory, there are two directories, "hippoSF_T1_v10_left" and "hippoSF_T1_v10_right". But in these two directories, the l(r)h.hippoSfLabels-T1.v10.mgz file is still not exsit. What's
the matter? I need your help. Thanks very muxh in advance.
