Vinas-iMac:~/Documents/Wanda/Wanda_SFS] vinagoghari% mri_glmfit --y /Users/vinagoghari/Documents/Wanda/Wanda_SFS/qdec/Untitled/y.mgh --fsgd /Users/vinagoghari/Documents/Wanda/Wanda_SFS/qdec/Untitled/qdec.fsgd dods --glmdir /Users/vinagoghari/Documents/Wanda/Wanda_SFS/qdec/Untitled --surf fsaverage lh --label /Users/vinagoghari/Documents/Wanda/Wanda_SFS/fsaverage/label/lh.aparc.label --C /Users/vinagoghari/Documents/Wanda/Wanda_SFS/qdec/Untitled/contrasts/lh-Avg-Intercept-area.mat --C /Users/vinagoghari/Documents/Wanda/Wanda_SFS/qdec/Untitled/contrasts/lh-Diff-Control-Relative-Intercept-area.mat

gdfReadHeader: reading /Users/vinagoghari/Documents/Wanda/Wanda_SFS/qdec/Untitled/qdec.fsgd

INFO: DeMeanFlag keyword not found, DeMeaning will NOT be done.

Continuous Variable Means (all subjects)

0 Age 40.6327 13.0176

1 IntraCranialVol 1.50352e+06 187456

Class Means of each Continuous Variable

1 GroupControl  38.8261 1480505.5707 

2 GroupRelative  42.2308 1523881.3029 

INFO: gd2mtx_method is dods

Reading source surface /Users/vinagoghari/Documents/Wanda/Wanda_SFS/fsaverage/surf/lh.white

Number of vertices 163842

Number of faces    327680

Total area         65416.648438

AvgVtxArea       0.399267

AvgVtxDist       0.721953

StdVtxDist       0.195470

$Id: mri_glmfit.c,v 1.196.2.6 2011/05/05 20:54:25 greve Exp $

cwd /Users/vinagoghari/Documents/Wanda/Wanda_SFS

cmdline mri_glmfit --y /Users/vinagoghari/Documents/Wanda/Wanda_SFS/qdec/Untitled/y.mgh --fsgd /Users/vinagoghari/Documents/Wanda/Wanda_SFS/qdec/Untitled/qdec.fsgd dods --glmdir /Users/vinagoghari/Documents/Wanda/Wanda_SFS/qdec/Untitled --surf fsaverage lh --label /Users/vinagoghari/Documents/Wanda/Wanda_SFS/fsaverage/label/lh.aparc.label --C /Users/vinagoghari/Documents/Wanda/Wanda_SFS/qdec/Untitled/contrasts/lh-Avg-Intercept-area.mat --C /Users/vinagoghari/Documents/Wanda/Wanda_SFS/qdec/Untitled/contrasts/lh-Diff-Control-Relative-Intercept-area.mat 

sysname  Darwin

hostname Vinas-iMac.local

machine  x86_64

user     vinagoghari

FixVertexAreaFlag = 1

UseMaskWithSmoothing     1

OneSampleGroupMean 0

y    /Users/vinagoghari/Documents/Wanda/Wanda_SFS/qdec/Untitled/y.mgh

logyflag 0

usedti  0

FSGD /Users/vinagoghari/Documents/Wanda/Wanda_SFS/qdec/Untitled/qdec.fsgd

labelmask  /Users/vinagoghari/Documents/Wanda/Wanda_SFS/fsaverage/label/lh.aparc.label

maskinv 0

glmdir /Users/vinagoghari/Documents/Wanda/Wanda_SFS/qdec/Untitled

IllCondOK 0

ReScaleX 1

DoFFx 0

Creating output directory /Users/vinagoghari/Documents/Wanda/Wanda_SFS/qdec/Untitled

Loading y from /Users/vinagoghari/Documents/Wanda/Wanda_SFS/qdec/Untitled/y.mgh

INFO: gd2mtx_method is dods

Saving design matrix to /Users/vinagoghari/Documents/Wanda/Wanda_SFS/qdec/Untitled/Xg.dat

Normalized matrix condition is 400.101

Matrix condition is 1e+08

Found 148151 points in label.

Pruning voxels by thr: 0.000000

Found 148025 voxels in mask

Saving mask to /Users/vinagoghari/Documents/Wanda/Wanda_SFS/qdec/Untitled/mask.mgh

Reshaping mriglm->mask...

search space = 73649.347769

ERROR: dimension mismatch between y and X.

  y has 3528 inputs, X has 49 rows.

My QDEC table has 49 subjects,2 groups, and 4 variables.

Many thanks,

Wanda