I can't remember that far back:), but it would not surprise me if they
were not there in 5.3. You can always use the v6 mri_glmfit with 5.3 data.

On 09/24/2018 12:39 PM, srishti goel wrote:
>
>         External Email - Use Caution
>
> Alright, yes I am using 5.3. What about the efficiency and z files?
>
> Best,
> Srishti
> Social/Clinical Research Specialist
> Child Imaging Research and Life Experiences Lab
> University of North Carolina at Chapel Hill
> email (W): srishtig@email.unc.edu <mailto:srishtig@email.unc.edu>
> skype: srishti.goel12
>
>
>
> On Mon, Sep 24, 2018 at 12:36 PM Greve, Douglas N.,Ph.D.
> <DGREVE@mgh.harvard.edu <mailto:DGREVE@mgh.harvard.edu>> wrote:
>
>     What version of FS are you using? The pcc may only be in the v6.
>
>     On 09/24/2018 12:10 PM, srishti goel wrote:
>     >
>     >         External Email - Use Caution
>     >
>     > Hi,
>     >
>     > I am running analysis to compare group difference in thickness
>     between
>     > two groups. I followed all the steps outlined on the wiki:
>     > https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/GroupAnalysis.
>     > Everything seemed to work fine except I didn't get the following
>     files
>     > in each contrast's directory
>     >
>     > efficiency.dat
>     > pcc.mgh
>     > z.mgh
>     >
>     > I don't understand why those files don't show up as I didn't get
>     any
>     > errors. Any help is appreciated.
>     >
>     > Best,
>     > Srishti
>     > Social/Clinical Research Specialist
>     > Child Imaging Research and Life Experiences Lab
>     > University of North Carolina at Chapel Hill
>     > email (W): srishtig@email.unc.edu
>     <mailto:srishtig@email.unc.edu> <mailto:srishtig@email.unc.edu
>     <mailto:srishtig@email.unc.edu>>
>     > skype: srishti.goel12
>     >
>     >
>     >
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