On 19 May 2017, at 15:31, Artyom Zinchenko <Artyom.Zinchenko@psy.lmu.de> wrote:

Dear experts, 

I am running running hippocampal subfield segmentation using the most recent version of the FSv6.0 on LinuxMint 17.3 Rosa.

For some (~ 25%, but not all) participants I did not get the subfields. I have later realized that although segmentation finished with out 
errors, I got the following message in the end:

Error using kvlGEMSMatlab
std: :bad_alloc

Error in kvlRasterizeAtlasMesh (line 11)

Error in segmentSubjectT1_autoEstimateAlveusML (line 628).


I have read that I need to check whether the T1resampled.mgz actually exists in the temporary directory of the subject. I have checked
and this file is indeed there: SBJ/tmp/hippoSF_T1_v10_right/T1resampled.mgz.

Please, let me know if this is a known problem and if there is anything I can do to correct it?

Thank you very much in advance, 

Artyom

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