HI

I believe that recon-all -s  <subjid> -qcache
will pre-cache smoothing from 0 through 25 fwhm. You can howevere select a small subjection of this by issuing recon-all 
-s  <subjid> -qcache  -fwhm <desired smoothing>.

-measure <surfmeas> can follow -qcache, where <surfmeas> is one of: thickness,
curv, sulc, area, jacobian_white or any surface measure. Multiple instances
of -measure <meas> is supported.

Knut J



-s <subjid> -qcache

Knut J
<subjid> -qcache

On 06/20/2012 06:23 PM, mdkruepke@uwalumni.com wrote:
Freesurfers-

For pre-smoothing subject surfaces for qdec using:

recon-all -s <subjid> -qcache
Is it necessary to have all the variations of smoothing done (ie - fwhm 0,5,10,15,20,25) or is it possible to run with only a subsection of these?

Best-
Michael
--
Michael D. Kruepke
PhD - University of Illinois at Urbana-Champaign 
BA - Psych - University of Wisconsin-Madison
mdkruepke@gmail.com
(262)-483-7449



_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.