Hi,

 

I actually had the some extra question in addition to the question Shahab had. So i thought to put the questions in the reply.

My final goal is to have Cortical Regions segmented at the subjects native coordinate space. And I prefer to have the segmentation in analyze format.

 

and also, I was wondering if

1- there is a way of saving Surfaces generated with FreeSurfer into an analyze image.

2- If we can control how fine the cortical segmentation be. (the number of regions segmented).

 

Behrang,

 

On 9/23/06, Bruce Fischl <fischl@nmr.mgh.harvard.edu> wrote:

Hi Shahab,

the ?h.*.annot files are the cortical labelings. What exactly do you wat
to do with them?

cheers,
Bruce
On Sat, 23 Sep 2006, Shahabuddin Ansari wrote:

> Hi,
>
>  I can extract subcorical objects from freesurfer segmentation, since each object is lableled with normalized intesity value. I was wondering if I can extract different cortical regions in the same fashion. I can, though, view the labeled cotical surface in tksurfer.
>
>  Thanks
>  Shahab
>
>
> ---------------------------------
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