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Hello Shrabani,

It looks like you do not have tcsh installed on your machine to run recon-all which is a tcsh script,

If you are using RedHat/CentOS linux,

$ sudo yum install tcsh

Fedora linux

$ sudo dnf install tcsh

Ubuntu/debian linux,

$ sudo apt-get install tcsh

I would also probably install csh the same way as well.

- R.


On Jun 19, 2019, at 20:49, Shrabani Ghosh <srbn.ghosh99@gmail.com> wrote:

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Hi  freesurfer, 

I am following the installation test as suggested (
https://surfer.nmr.mgh.harvard.edu/fswiki/DownloadAndInstall  and am
currently stuck at example 2. When I ran recon-all, I got the output: 
"bash: /home/sghos003/freesurfer/bin/recon-all: /bin/tcsh: bad interpreter:
 No such file or directory"
Any suggestions? Thank you.

Shrabani Ghosh

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