Thu 17 Nov 2022 01:39:30 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057 /opt/freesurfer/bin/recon-all -s sub057 -i ./test4/sub057/sub057.nii -all -qcache subjid sub057 setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Actual FREESURFER_HOME /opt/freesurfer build-stamp.txt: freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c Linux shenkang-B560M-AORUS-ELITE 5.15.0-46-generic #49~20.04.1-Ubuntu SMP Thu Aug 4 19:15:44 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux cputime unlimited filesize unlimited datasize unlimited stacksize 8192 kbytes coredumpsize 0 kbytes memoryuse unlimited vmemoryuse unlimited descriptors 1024 memorylocked 65536 kbytes maxproc 63166 maxlocks unlimited maxsignal 63166 maxmessage 819200 maxnice 0 maxrtprio 0 maxrttime unlimited total used free shared buff/cache available Mem: 16247172 6466772 5106316 9596 4674084 9435868 Swap: 15999996 835328 15164668 ######################################## program versions used $Id: recon-all,v 1.580.2.16 2017/01/18 14:11:24 zkaufman Exp $ $Id: mri_motion_correct.fsl,v 1.15 2016/02/16 17:17:20 zkaufman Exp $ mri_convert.bin -all-info ProgramName: mri_convert.bin ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 FLIRT version 5.5 $Id: talairach_avi,v 1.13 2015/12/23 04:25:17 greve Exp $ mri_convert.bin --version stable6 ProgramName: tkregister2_cmdl ProgramArguments: --all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: tkregister2.c,v 1.132.2.1 2016/08/02 21:17:29 greve Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 Program nu_correct, built from: Package MNI N3, version 1.12.0, compiled by nicks@terrier (x86_64-unknown-linux-gnu) on 2015-06-19 at 01:25:34 ProgramName: mri_make_uchar ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_make_uchar.c,v 1.4 2011/03/02 00:04:14 nicks Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_normalize ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_normalize.c,v 1.88.2.3 2016/12/27 16:47:13 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_watershed ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_watershed.cpp,v 1.103 2016/06/17 18:00:49 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_gcut ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_gcut.cpp,v 1.14 2011/03/02 00:04:16 nicks Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_segment ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_segment.c,v 1.43.2.1 2016/10/27 22:24:52 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_label2label.bin ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_label2label.c,v 1.48.2.2 2016/12/12 14:15:26 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_em_register ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_em_register.c,v 1.105.2.1 2016/10/27 22:25:10 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_ca_normalize ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_ca_normalize.c,v 1.67.2.2 2016/10/27 22:25:09 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_ca_register ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_ca_register.c,v 1.96.2.3 2016/10/27 22:25:10 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_ca_label ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_ca_label.c,v 1.113.2.2 2016/10/27 22:25:10 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_pretess ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_pretess.c,v 1.22 2013/08/30 18:12:25 mreuter Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_fill ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_fill.c,v 1.119 2011/10/25 14:09:58 fischl Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_tessellate ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_tessellate.c,v 1.38.2.1 2016/07/26 18:46:38 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_concatenate_lta.bin ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_concatenate_lta.c,v 1.16 2015/11/21 00:06:20 greve Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_normalize_tp2 ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_normalize_tp2.c,v 1.8 2011/03/02 00:04:23 nicks Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_smooth ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_smooth.c,v 1.30 2014/01/21 18:48:21 fischl Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_inflate ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_inflate.c,v 1.45 2016/01/20 23:42:15 greve Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_curvature ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_curvature.c,v 1.31 2011/03/02 00:04:30 nicks Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_sphere ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_sphere.c,v 1.61 2016/01/20 23:42:15 greve Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_fix_topology ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_fix_topology.c,v 1.50.2.1 2016/10/27 22:25:58 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_topo_fixer ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_topo_fixer.cpp,v 1.29 2011/03/02 00:04:34 nicks Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_ca_label ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_ca_label.c,v 1.37 2014/02/04 17:46:42 fischl Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_euler_number ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_euler_number.c,v 1.10 2013/01/14 22:39:14 greve Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_make_surfaces ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_make_surfaces.c,v 1.164.2.4 2016/12/13 22:26:32 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_register ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_register.c,v 1.63 2016/01/20 23:43:04 greve Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_volmask ProgramArguments: --all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_volmask.cpp,v 1.26.2.2 2016/11/18 20:05:18 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_anatomical_stats ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_anatomical_stats.c,v 1.79 2016/03/14 15:15:34 greve Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mrisp_paint ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mrisp_paint.c,v 1.12 2016/03/22 14:47:57 fischl Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_curvature_stats ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_curvature_stats.c,v 1.65 2015/06/04 20:50:51 nicks Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_calc ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_calc.c,v 1.54.2.1 2016/09/27 18:51:28 greve Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 $Id: mri_robust_register.cpp,v 1.77 2016/01/20 23:36:17 greve Exp $ ProgramName: mri_robust_register.bin ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_robust_register.cpp,v 1.77 2016/01/20 23:36:17 greve Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 $Id: mri_robust_template.cpp,v 1.54 2016/05/05 21:17:08 mreuter Exp $ ProgramName: mri_robust_template ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_robust_template.cpp,v 1.54 2016/05/05 21:17:08 mreuter Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_and ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_and.c,v 1.4 2011/03/02 00:04:13 nicks Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_or ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_or.c,v 1.5 2013/03/20 15:03:29 lzollei Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_fuse_segmentations ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_fuse_segmentations.c,v 1.8 2011/03/02 00:04:15 nicks Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_segstats ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_relabel_hypointensities ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/16-17:39:30-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_relabel_hypointensities.c,v 1.13 2015/05/15 18:44:10 nicks Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ####################################### GCADIR /opt/freesurfer/average GCA RB_all_2016-05-10.vc700.gca GCASkull RB_all_withskull_2016-05-10.vc700.gca AvgCurvTif folding.atlas.acfb40.noaparc.i12.2016-08-02.tif GCSDIR /opt/freesurfer/average GCS DKaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs ####################################### /home/shenkang/Desktop/T1/RESULTS/sub057 mri_convert /home/shenkang/Desktop/T1/T1nifti/test4/sub057/sub057.nii /home/shenkang/Desktop/T1/RESULTS/sub057/mri/orig/001.mgz mri_convert.bin /home/shenkang/Desktop/T1/T1nifti/test4/sub057/sub057.nii /home/shenkang/Desktop/T1/RESULTS/sub057/mri/orig/001.mgz $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from /home/shenkang/Desktop/T1/T1nifti/test4/sub057/sub057.nii... TR=8.24, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (0.998429, -0.0422315, 0.0368249) j_ras = (0.0457345, 0.993921, -0.100144) k_ras = (-0.0323718, 0.101671, 0.994291) writing to /home/shenkang/Desktop/T1/RESULTS/sub057/mri/orig/001.mgz... #-------------------------------------------- #@# MotionCor Thu 17 Nov 2022 01:39:33 AM CST Found 1 runs /home/shenkang/Desktop/T1/RESULTS/sub057/mri/orig/001.mgz Checking for (invalid) multi-frame inputs... WARNING: only one run found. This is OK, but motion correction cannot be performed on one run, so I'll copy the run to rawavg and continue. cp /home/shenkang/Desktop/T1/RESULTS/sub057/mri/orig/001.mgz /home/shenkang/Desktop/T1/RESULTS/sub057/mri/rawavg.mgz /home/shenkang/Desktop/T1/RESULTS/sub057 mri_convert /home/shenkang/Desktop/T1/RESULTS/sub057/mri/rawavg.mgz /home/shenkang/Desktop/T1/RESULTS/sub057/mri/orig.mgz --conform mri_convert.bin /home/shenkang/Desktop/T1/RESULTS/sub057/mri/rawavg.mgz /home/shenkang/Desktop/T1/RESULTS/sub057/mri/orig.mgz --conform $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from /home/shenkang/Desktop/T1/RESULTS/sub057/mri/rawavg.mgz... TR=8.24, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (0.998429, -0.0422315, 0.0368249) j_ras = (0.0457345, 0.993921, -0.100144) k_ras = (-0.0323718, 0.101671, 0.994291) changing data type from float to uchar (noscale = 0)... MRIchangeType: Building histogram Reslicing using trilinear interpolation writing to /home/shenkang/Desktop/T1/RESULTS/sub057/mri/orig.mgz... mri_add_xform_to_header -c /home/shenkang/Desktop/T1/RESULTS/sub057/mri/transforms/talairach.xfm /home/shenkang/Desktop/T1/RESULTS/sub057/mri/orig.mgz /home/shenkang/Desktop/T1/RESULTS/sub057/mri/orig.mgz INFO: extension is mgz #-------------------------------------------- #@# Talairach Thu 17 Nov 2022 01:39:43 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/mri mri_nu_correct.mni --no-rescale --i orig.mgz --o orig_nu.mgz --n 1 --proto-iters 1000 --distance 50 /home/shenkang/Desktop/T1/RESULTS/sub057/mri /opt/freesurfer/bin/mri_nu_correct.mni --no-rescale --i orig.mgz --o orig_nu.mgz --n 1 --proto-iters 1000 --distance 50 nIters 1 $Id: mri_nu_correct.mni,v 1.27 2016/02/26 16:19:49 mreuter Exp $ Linux shenkang-B560M-AORUS-ELITE 5.15.0-46-generic #49~20.04.1-Ubuntu SMP Thu Aug 4 19:15:44 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux Thu 17 Nov 2022 01:39:43 AM CST Program nu_correct, built from: Package MNI N3, version 1.12.0, compiled by nicks@terrier (x86_64-unknown-linux-gnu) on 2015-06-19 at 01:25:34 /usr/bin/bc tmpdir is ./tmp.mri_nu_correct.mni.381039 /home/shenkang/Desktop/T1/RESULTS/sub057/mri mri_convert orig.mgz ./tmp.mri_nu_correct.mni.381039/nu0.mnc -odt float mri_convert.bin orig.mgz ./tmp.mri_nu_correct.mni.381039/nu0.mnc -odt float $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from orig.mgz... TR=8.24, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, -2.32831e-10, 0) j_ras = (-3.72529e-09, 7.45058e-09, -1) k_ras = (-6.98492e-10, 1, -7.45058e-09) changing data type from uchar to float (noscale = 0)... writing to ./tmp.mri_nu_correct.mni.381039/nu0.mnc... -------------------------------------------------------- Iteration 1 Thu 17 Nov 2022 01:39:47 AM CST nu_correct -clobber ./tmp.mri_nu_correct.mni.381039/nu0.mnc ./tmp.mri_nu_correct.mni.381039/nu1.mnc -tmpdir ./tmp.mri_nu_correct.mni.381039/0/ -iterations 1000 -distance 50 [shenkang@shenkang-B560M-AORUS-ELITE:/home/shenkang/Desktop/T1/RESULTS/sub057/mri/] [2022-11-17 01:39:47] running: /opt/freesurfer/mni/bin/nu_estimate_np_and_em -parzen -log -sharpen 0.15 0.01 -iterations 1000 -stop 0.001 -shrink 4 -auto_mask -nonotify -b_spline 1.0e-7 -distance 50 -quiet -execute -clobber -nokeeptmp -tmpdir ./tmp.mri_nu_correct.mni.381039/0/ ./tmp.mri_nu_correct.mni.381039/nu0.mnc ./tmp.mri_nu_correct.mni.381039/nu1.imp 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./tmp.mri_nu_correct.mni.381039/nu1.mnc orig_nu.mgz --like orig.mgz --conform $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from ./tmp.mri_nu_correct.mni.381039/nu1.mnc... TR=0.00, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, -2.32831e-10, 0) j_ras = (-3.72529e-09, 7.45058e-09, -1) k_ras = (-6.98492e-10, 1, -7.45058e-09) INFO: transform src into the like-volume: orig.mgz changing data type from float to uchar (noscale = 0)... MRIchangeType: Building histogram writing to orig_nu.mgz... Thu 17 Nov 2022 01:40:38 AM CST mri_nu_correct.mni done talairach_avi --i orig_nu.mgz --xfm transforms/talairach.auto.xfm talairach_avi log file is transforms/talairach_avi.log... Started at Thu 17 Nov 2022 01:40:38 AM CST Ended at Thu 17 Nov 2022 01:41:14 AM CST talairach_avi done cp transforms/talairach.auto.xfm transforms/talairach.xfm #-------------------------------------------- #@# Talairach Failure Detection Thu 17 Nov 2022 01:41:16 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/mri talairach_afd -T 0.005 -xfm transforms/talairach.xfm talairach_afd: Talairach Transform: transforms/talairach.xfm OK (p=0.2843, pval=0.0254 >= threshold=0.0050) awk -f /opt/freesurfer/bin/extract_talairach_avi_QA.awk /home/shenkang/Desktop/T1/RESULTS/sub057/mri/transforms/talairach_avi.log tal_QC_AZS /home/shenkang/Desktop/T1/RESULTS/sub057/mri/transforms/talairach_avi.log TalAviQA: 0.97587 z-score: 0 #-------------------------------------------- #@# Nu Intensity Correction Thu 17 Nov 2022 01:41:16 AM CST mri_nu_correct.mni --i orig.mgz --o nu.mgz --uchar transforms/talairach.xfm --n 2 /home/shenkang/Desktop/T1/RESULTS/sub057/mri /opt/freesurfer/bin/mri_nu_correct.mni --i orig.mgz --o nu.mgz --uchar transforms/talairach.xfm --n 2 nIters 2 $Id: mri_nu_correct.mni,v 1.27 2016/02/26 16:19:49 mreuter Exp $ Linux shenkang-B560M-AORUS-ELITE 5.15.0-46-generic #49~20.04.1-Ubuntu SMP Thu Aug 4 19:15:44 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux Thu 17 Nov 2022 01:41:16 AM CST Program nu_correct, built from: Package MNI N3, version 1.12.0, compiled by nicks@terrier (x86_64-unknown-linux-gnu) on 2015-06-19 at 01:25:34 /usr/bin/bc tmpdir is ./tmp.mri_nu_correct.mni.381929 /home/shenkang/Desktop/T1/RESULTS/sub057/mri mri_convert orig.mgz ./tmp.mri_nu_correct.mni.381929/nu0.mnc -odt float mri_convert.bin orig.mgz ./tmp.mri_nu_correct.mni.381929/nu0.mnc -odt float $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from orig.mgz... TR=8.24, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, -2.32831e-10, 0) j_ras = (-3.72529e-09, 7.45058e-09, -1) k_ras = (-6.98492e-10, 1, -7.45058e-09) changing data type from uchar to float (noscale = 0)... writing to ./tmp.mri_nu_correct.mni.381929/nu0.mnc... -------------------------------------------------------- Iteration 1 Thu 17 Nov 2022 01:41:19 AM CST nu_correct -clobber ./tmp.mri_nu_correct.mni.381929/nu0.mnc ./tmp.mri_nu_correct.mni.381929/nu1.mnc -tmpdir ./tmp.mri_nu_correct.mni.381929/0/ [shenkang@shenkang-B560M-AORUS-ELITE:/home/shenkang/Desktop/T1/RESULTS/sub057/mri/] [2022-11-17 01:41:19] running: /opt/freesurfer/mni/bin/nu_estimate_np_and_em -parzen -log -sharpen 0.15 0.01 -iterations 50 -stop 0.001 -shrink 4 -auto_mask -nonotify -b_spline 1.0e-7 -distance 200 -quiet -execute -clobber -nokeeptmp -tmpdir ./tmp.mri_nu_correct.mni.381929/0/ ./tmp.mri_nu_correct.mni.381929/nu0.mnc ./tmp.mri_nu_correct.mni.381929/nu1.imp 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./tmp.mri_nu_correct.mni.381929/nu1.mnc ./tmp.mri_nu_correct.mni.381929/nu2.mnc -tmpdir ./tmp.mri_nu_correct.mni.381929/1/ [shenkang@shenkang-B560M-AORUS-ELITE:/home/shenkang/Desktop/T1/RESULTS/sub057/mri/] [2022-11-17 01:41:52] running: /opt/freesurfer/mni/bin/nu_estimate_np_and_em -parzen -log -sharpen 0.15 0.01 -iterations 50 -stop 0.001 -shrink 4 -auto_mask -nonotify -b_spline 1.0e-7 -distance 200 -quiet -execute -clobber -nokeeptmp -tmpdir ./tmp.mri_nu_correct.mni.381929/1/ ./tmp.mri_nu_correct.mni.381929/nu1.mnc ./tmp.mri_nu_correct.mni.381929/nu2.imp Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done 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of field change: 0.00094682 mri_binarize --i ./tmp.mri_nu_correct.mni.381929/nu2.mnc --min -1 --o ./tmp.mri_nu_correct.mni.381929/ones.mgz $Id: mri_binarize.c,v 1.43 2016/06/09 20:46:21 greve Exp $ cwd /home/shenkang/Desktop/T1/RESULTS/sub057/mri cmdline mri_binarize.bin --i ./tmp.mri_nu_correct.mni.381929/nu2.mnc --min -1 --o ./tmp.mri_nu_correct.mni.381929/ones.mgz sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang input ./tmp.mri_nu_correct.mni.381929/nu2.mnc frame 0 nErode3d 0 nErode2d 0 output ./tmp.mri_nu_correct.mni.381929/ones.mgz Binarizing based on threshold min -1 max +infinity binval 1 binvalnot 0 fstart = 0, fend = 0, nframes = 1 Found 16777216 values in range Counting number of voxels in first frame Found 16777216 voxels in final mask Count: 16777216 16777216.000000 16777216 100.000000 mri_binarize done mri_segstats --id 1 --seg ./tmp.mri_nu_correct.mni.381929/ones.mgz --i orig.mgz --sum ./tmp.mri_nu_correct.mni.381929/sum.junk --avgwf ./tmp.mri_nu_correct.mni.381929/input.mean.dat $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $ cwd cmdline mri_segstats --id 1 --seg ./tmp.mri_nu_correct.mni.381929/ones.mgz --i orig.mgz --sum ./tmp.mri_nu_correct.mni.381929/sum.junk --avgwf ./tmp.mri_nu_correct.mni.381929/input.mean.dat sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang UseRobust 0 Loading ./tmp.mri_nu_correct.mni.381929/ones.mgz Loading orig.mgz Voxel Volume is 1 mm^3 Generating list of segmentation ids Found 1 segmentations Computing statistics for each segmentation Reporting on 1 segmentations Using PrintSegStat Computing spatial average of each frame 0 Writing to ./tmp.mri_nu_correct.mni.381929/input.mean.dat mri_segstats done mri_segstats --id 1 --seg ./tmp.mri_nu_correct.mni.381929/ones.mgz --i ./tmp.mri_nu_correct.mni.381929/nu2.mnc --sum ./tmp.mri_nu_correct.mni.381929/sum.junk --avgwf ./tmp.mri_nu_correct.mni.381929/output.mean.dat $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $ cwd cmdline mri_segstats --id 1 --seg ./tmp.mri_nu_correct.mni.381929/ones.mgz --i ./tmp.mri_nu_correct.mni.381929/nu2.mnc --sum ./tmp.mri_nu_correct.mni.381929/sum.junk --avgwf ./tmp.mri_nu_correct.mni.381929/output.mean.dat sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang UseRobust 0 Loading ./tmp.mri_nu_correct.mni.381929/ones.mgz Loading ./tmp.mri_nu_correct.mni.381929/nu2.mnc Voxel Volume is 1 mm^3 Generating list of segmentation ids Found 1 segmentations Computing statistics for each segmentation Reporting on 1 segmentations Using PrintSegStat Computing spatial average of each frame 0 Writing to ./tmp.mri_nu_correct.mni.381929/output.mean.dat mri_segstats done mris_calc -o ./tmp.mri_nu_correct.mni.381929/nu2.mnc ./tmp.mri_nu_correct.mni.381929/nu2.mnc mul .96135488837567359507 Saving result to './tmp.mri_nu_correct.mni.381929/nu2.mnc' (type = MINC ) [ ok ] mri_convert ./tmp.mri_nu_correct.mni.381929/nu2.mnc nu.mgz --like orig.mgz mri_convert.bin ./tmp.mri_nu_correct.mni.381929/nu2.mnc nu.mgz --like orig.mgz $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from ./tmp.mri_nu_correct.mni.381929/nu2.mnc... TR=0.00, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, -2.32831e-10, 0) j_ras = (-3.72529e-09, 7.45058e-09, -1) k_ras = (-6.98492e-10, 1, -7.45058e-09) INFO: transform src into the like-volume: orig.mgz writing to nu.mgz... mri_make_uchar nu.mgz transforms/talairach.xfm nu.mgz type change took 0 minutes and 6 seconds. mapping (33, 170) to ( 3, 110) Thu 17 Nov 2022 01:42:58 AM CST mri_nu_correct.mni done mri_add_xform_to_header -c /home/shenkang/Desktop/T1/RESULTS/sub057/mri/transforms/talairach.xfm nu.mgz nu.mgz INFO: extension is mgz #-------------------------------------------- #@# Intensity Normalization Thu 17 Nov 2022 01:42:59 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/mri mri_normalize -g 1 -mprage nu.mgz T1.mgz using max gradient = 1.000 assuming input volume is MGH (Van der Kouwe) MP-RAGE reading from nu.mgz... normalizing image... talairach transform 1.05726 -0.03516 0.04381 -10.08876; 0.01552 1.19393 -0.26313 -12.79274; -0.01651 0.25560 1.00562 -30.56923; 0.00000 0.00000 0.00000 1.00000; processing without aseg, no1d=0 MRInormInit(): INFO: Modifying talairach volume c_(r,a,s) based on average_305 MRInormalize(): MRIsplineNormalize(): npeaks = 16 Starting OpenSpline(): npoints = 16 building Voronoi diagram... performing soap bubble smoothing, sigma = 8... Iterating 2 times --------------------------------- 3d normalization pass 1 of 2 white matter peak found at 110 white matter peak found at 110 gm peak at 61 (61), valley at 20 (20) csf peak at 30, setting threshold to 50 building Voronoi diagram... performing soap bubble smoothing, sigma = 8... --------------------------------- 3d normalization pass 2 of 2 white matter peak found at 110 white matter peak found at 110 gm peak at 61 (61), valley at 17 (17) csf peak at 31, setting threshold to 51 building Voronoi diagram... performing soap bubble smoothing, sigma = 8... Done iterating --------------------------------- writing output to T1.mgz 3D bias adjustment took 1 minutes and 28 seconds. #-------------------------------------------- #@# Skull Stripping Thu 17 Nov 2022 01:44:28 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/mri mri_em_register -rusage /home/shenkang/Desktop/T1/RESULTS/sub057/touch/rusage.mri_em_register.skull.dat -skull nu.mgz /opt/freesurfer/average/RB_all_withskull_2016-05-10.vc700.gca transforms/talairach_with_skull.lta aligning to atlas containing skull, setting unknown_nbr_spacing = 5 == Number of threads available to mri_em_register for OpenMP = 1 == reading 1 input volumes... logging results to talairach_with_skull.log reading '/opt/freesurfer/average/RB_all_withskull_2016-05-10.vc700.gca'... average std = 22.9 using min determinant for regularization = 52.6 0 singular and 9002 ill-conditioned covariance matrices regularized reading 'nu.mgz'... freeing gibbs priors...done. accounting for voxel sizes in initial transform bounding unknown intensity as < 8.7 or > 569.1 total sample mean = 77.6 (1399 zeros) ************************************************ spacing=8, using 3243 sample points, tol=1.00e-05... ************************************************ register_mri: find_optimal_transform find_optimal_transform: nsamples 3243, passno 0, spacing 8 resetting wm mean[0]: 100 --> 108 resetting gm mean[0]: 61 --> 61 input volume #1 is the most T1-like using real data threshold=12.0 skull bounding box = (54, 35, 48) --> (202, 222, 204) using (103, 97, 126) as brain centroid... mean wm in atlas = 108, using box (85,74,107) --> (121, 120,145) to find MRI wm before smoothing, mri peak at 108 robust fit to distribution - 108 +- 5.1 after smoothing, mri peak at 108, scaling input intensities by 1.000 scaling channel 0 by 1 initial log_p = -4.498 ************************************************ First Search limited to translation only. ************************************************ max log p = -4.386275 @ (-9.091, 9.091, -9.091) max log p = -4.325630 @ (4.545, -4.545, -4.545) max log p = -4.292854 @ (2.273, 6.818, 6.818) max log p = -4.265158 @ (-1.136, -1.136, -1.136) max log p = -4.265158 @ (0.000, 0.000, 0.000) max log p = -4.257205 @ (-0.852, 1.420, -0.284) Found translation: (-4.3, 11.6, -8.2): log p = -4.257 **************************************** Nine parameter search. iteration 0 nscales = 0 ... **************************************** Result so far: scale 1.000: max_log_p=-3.795, old_max_log_p =-4.257 (thresh=-4.3) 1.06375 0.00000 0.00000 -12.49382; 0.00000 1.03837 -0.27823 39.79383; 0.00000 0.31997 1.19413 -80.63494; 0.00000 0.00000 0.00000 1.00000; **************************************** Nine parameter search. iteration 1 nscales = 0 ... **************************************** Result so far: scale 1.000: max_log_p=-3.795, old_max_log_p =-3.795 (thresh=-3.8) 1.06375 0.00000 0.00000 -12.49382; 0.00000 1.03837 -0.27823 39.79383; 0.00000 0.31997 1.19413 -80.63494; 0.00000 0.00000 0.00000 1.00000; reducing scale to 0.2500 **************************************** Nine parameter search. iteration 2 nscales = 1 ... **************************************** Result so far: scale 0.250: max_log_p=-3.713, old_max_log_p =-3.795 (thresh=-3.8) 1.04101 0.07977 0.02117 -20.62575; -0.06954 1.07429 -0.29070 49.32879; -0.03415 0.32557 1.21503 -77.70222; 0.00000 0.00000 0.00000 1.00000; **************************************** Nine parameter search. iteration 3 nscales = 1 ... **************************************** Result so far: scale 0.250: max_log_p=-3.712, old_max_log_p =-3.713 (thresh=-3.7) 1.04101 0.07977 0.02117 -20.62575; -0.06954 1.07429 -0.29070 49.32879; -0.03351 0.31946 1.19224 -74.16550; 0.00000 0.00000 0.00000 1.00000; reducing scale to 0.0625 **************************************** Nine parameter search. iteration 4 nscales = 2 ... **************************************** Result so far: scale 0.062: max_log_p=-3.705, old_max_log_p =-3.712 (thresh=-3.7) 1.03979 0.07968 0.02114 -20.45483; -0.06945 1.07303 -0.29036 49.43760; -0.03347 0.31909 1.19084 -73.47932; 0.00000 0.00000 0.00000 1.00000; **************************************** Nine parameter search. iteration 5 nscales = 2 ... **************************************** Result so far: scale 0.062: max_log_p=-3.698, old_max_log_p =-3.705 (thresh=-3.7) 1.04101 0.07977 0.02117 -20.62513; -0.06937 1.07177 -0.29002 50.01527; -0.03359 0.32021 1.19503 -75.06671; 0.00000 0.00000 0.00000 1.00000; **************************************** Nine parameter search. iteration 6 nscales = 2 ... **************************************** Result so far: scale 0.062: max_log_p=-3.696, old_max_log_p =-3.698 (thresh=-3.7) 1.04223 0.07987 0.02119 -20.79564; -0.06945 1.07303 -0.29036 49.90727; -0.03367 0.32096 1.19783 -75.50263; 0.00000 0.00000 0.00000 1.00000; min search scale 0.025000 reached *********************************************** Computing MAP estimate using 3243 samples... *********************************************** dt = 5.00e-06, momentum=0.80, tol=1.00e-05 l_intensity = 1.0000 Aligning input volume to GCA... Transform matrix 1.04223 0.07987 0.02119 -20.79564; -0.06945 1.07303 -0.29036 49.90727; -0.03367 0.32096 1.19783 -75.50263; 0.00000 0.00000 0.00000 1.00000; nsamples 3243 Quasinewton: input matrix 1.04223 0.07987 0.02119 -20.79564; -0.06945 1.07303 -0.29036 49.90727; -0.03367 0.32096 1.19783 -75.50263; 0.00000 0.00000 0.00000 1.00000; outof QuasiNewtonEMA: 009: -log(p) = -0.0 tol 0.000010 Resulting transform: 1.04223 0.07987 0.02119 -20.79564; -0.06945 1.07303 -0.29036 49.90727; -0.03367 0.32096 1.19783 -75.50263; 0.00000 0.00000 0.00000 1.00000; pass 1, spacing 8: log(p) = -3.696 (old=-4.498) transform before final EM align: 1.04223 0.07987 0.02119 -20.79564; -0.06945 1.07303 -0.29036 49.90727; -0.03367 0.32096 1.19783 -75.50263; 0.00000 0.00000 0.00000 1.00000; ************************************************** EM alignment process ... Computing final MAP estimate using 364799 samples. ************************************************** dt = 5.00e-06, momentum=0.80, tol=1.00e-07 l_intensity = 1.0000 Aligning input volume to GCA... Transform matrix 1.04223 0.07987 0.02119 -20.79564; -0.06945 1.07303 -0.29036 49.90727; -0.03367 0.32096 1.19783 -75.50263; 0.00000 0.00000 0.00000 1.00000; nsamples 364799 Quasinewton: input matrix 1.04223 0.07987 0.02119 -20.79564; -0.06945 1.07303 -0.29036 49.90727; -0.03367 0.32096 1.19783 -75.50263; 0.00000 0.00000 0.00000 1.00000; outof QuasiNewtonEMA: 011: -log(p) = 4.2 tol 0.000000 final transform: 1.04223 0.07987 0.02119 -20.79564; -0.06945 1.07303 -0.29036 49.90727; -0.03367 0.32096 1.19783 -75.50263; 0.00000 0.00000 0.00000 1.00000; writing output transformation to transforms/talairach_with_skull.lta... mri_em_register utimesec 1009.965513 mri_em_register stimesec 1.871987 mri_em_register ru_maxrss 614268 mri_em_register ru_ixrss 0 mri_em_register ru_idrss 0 mri_em_register ru_isrss 0 mri_em_register ru_minflt 161737 mri_em_register ru_majflt 0 mri_em_register ru_nswap 0 mri_em_register ru_inblock 0 mri_em_register ru_oublock 24 mri_em_register ru_msgsnd 0 mri_em_register ru_msgrcv 0 mri_em_register ru_nsignals 0 mri_em_register ru_nvcsw 0 mri_em_register ru_nivcsw 963 registration took 16 minutes and 52 seconds. mri_watershed -rusage /home/shenkang/Desktop/T1/RESULTS/sub057/touch/rusage.mri_watershed.dat -T1 -brain_atlas /opt/freesurfer/average/RB_all_withskull_2016-05-10.vc700.gca transforms/talairach_with_skull.lta T1.mgz brainmask.auto.mgz Mode: T1 normalized volume Mode: Use the information of atlas (default parms, --help for details) ********************************************************* The input file is T1.mgz The output file is brainmask.auto.mgz Weighting the input with atlas information before watershed *************************WATERSHED************************** Sorting... first estimation of the COG coord: x=129 y=106 z=132 r=70 first estimation of the main basin volume: 1486528 voxels Looking for seedpoints 2 found in the cerebellum 16 found in the rest of the brain global maximum in x=102, y=88, z=101, Imax=255 CSF=14, WM_intensity=110, WM_VARIANCE=5 WM_MIN=110, WM_HALF_MIN=110, WM_HALF_MAX=110, WM_MAX=110 preflooding height equal to 10 percent done. Analyze... main basin size=519583346 voxels, voxel volume =1.000 = 519583346 mmm3 = 519583.360 cm3 done. PostAnalyze...Basin Prior 37 basins merged thanks to atlas ***** 0 basin(s) merged in 1 iteration(s) ***** 0 voxel(s) added to the main basin done. Weighting the input with prior template ****************TEMPLATE DEFORMATION**************** second estimation of the COG coord: x=129,y=108, z=124, r=8256 iterations ^^^^^^^^ couldn't find WM with original limits - expanding ^^^^^^ GLOBAL CSF_MIN=1, CSF_intensity=2, CSF_MAX=4 , nb = 45458 RIGHT_CER CSF_MIN=1, CSF_intensity=2, CSF_MAX=4 , nb = -1056710578 LEFT_CER CSF_MIN=1, CSF_intensity=2, CSF_MAX=4 , nb = -1066863589 RIGHT_BRAIN CSF_MIN=1, CSF_intensity=2, CSF_MAX=4 , nb = 1091756815 LEFT_BRAIN CSF_MIN=1, CSF_intensity=2, CSF_MAX=4 , nb = 1063135002 OTHER CSF_MIN=0, CSF_intensity=7, CSF_MAX=22 , nb = 1077875147 Problem with the least square interpolation in GM_MIN calculation. CSF_MAX TRANSITION GM_MIN GM GLOBAL before analyzing : 4, 7, 39, 56 after analyzing : 4, 28, 39, 35 RIGHT_CER before analyzing : 4, 6, 37, 67 after analyzing : 4, 26, 37, 36 LEFT_CER before analyzing : 4, 6, 39, 61 after analyzing : 4, 28, 39, 36 RIGHT_BRAIN before analyzing : 4, 7, 39, 55 after analyzing : 4, 28, 39, 34 LEFT_BRAIN before analyzing : 4, 7, 39, 56 after analyzing : 4, 28, 39, 35 OTHER before analyzing : 22, 34, 42, 52 after analyzing : 22, 39, 42, 42 mri_strip_skull: done peeling brain highly tesselated surface with 10242 vertices matching...58 iterations *********************VALIDATION********************* curvature mean = -0.013, std = 0.010 curvature mean = 70.090, std = 5.138 No Rigid alignment: -atlas Mode Off (basic atlas / no registration) before rotation: sse = 12.27, sigma = 22.79 after rotation: sse = 12.27, sigma = 22.79 Localization of inacurate regions: Erosion-Dilation steps the sse mean is 15.77, its var is 31.70 before Erosion-Dilatation 17.97% of inacurate vertices after Erosion-Dilatation 28.22% of inacurate vertices 24.33% of 'positive' inacurate vertices 75.67% of 'negative' inacurate vertices The surface validation has detected a possible Error If the final segmentation is not valid, try using the option '-atlas' Scaling of atlas fields onto current surface fields ********FINAL ITERATIVE TEMPLATE DEFORMATION******** Compute Local values csf/gray Fine Segmentation...27 iterations mri_strip_skull: done peeling brain Brain Size = 1567766 voxels, voxel volume = 1.000 mm3 = 1567766 mmm3 = 1567.766 cm3 ****************************** Saving brainmask.auto.mgz done mri_watershed utimesec 21.621871 mri_watershed stimesec 0.268023 mri_watershed ru_maxrss 823708 mri_watershed ru_ixrss 0 mri_watershed ru_idrss 0 mri_watershed ru_isrss 0 mri_watershed ru_minflt 204253 mri_watershed ru_majflt 0 mri_watershed ru_nswap 0 mri_watershed ru_inblock 0 mri_watershed ru_oublock 2496 mri_watershed ru_msgsnd 0 mri_watershed ru_msgrcv 0 mri_watershed ru_nsignals 0 mri_watershed ru_nvcsw 0 mri_watershed ru_nivcsw 39 mri_watershed done cp brainmask.auto.mgz brainmask.mgz #------------------------------------- #@# EM Registration Thu 17 Nov 2022 02:01:43 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/mri mri_em_register -rusage /home/shenkang/Desktop/T1/RESULTS/sub057/touch/rusage.mri_em_register.dat -uns 3 -mask brainmask.mgz nu.mgz /opt/freesurfer/average/RB_all_2016-05-10.vc700.gca transforms/talairach.lta setting unknown_nbr_spacing = 3 using MR volume brainmask.mgz to mask input volume... == Number of threads available to mri_em_register for OpenMP = 1 == reading 1 input volumes... logging results to talairach.log reading '/opt/freesurfer/average/RB_all_2016-05-10.vc700.gca'... average std = 7.3 using min determinant for regularization = 5.3 0 singular and 841 ill-conditioned covariance matrices regularized reading 'nu.mgz'... freeing gibbs priors...done. accounting for voxel sizes in initial transform bounding unknown intensity as < 6.3 or > 503.7 total sample mean = 78.8 (1011 zeros) ************************************************ spacing=8, using 2830 sample points, tol=1.00e-05... ************************************************ register_mri: find_optimal_transform find_optimal_transform: nsamples 2830, passno 0, spacing 8 resetting wm mean[0]: 98 --> 107 resetting gm mean[0]: 61 --> 61 input volume #1 is the most T1-like using real data threshold=27.1 skull bounding box = (61, 43, 55) --> (198, 155, 203) using (107, 80, 129) as brain centroid... mean wm in atlas = 107, using box (90,66,111) --> (123, 93,147) to find MRI wm before smoothing, mri peak at 107 robust fit to distribution - 107 +- 4.6 after smoothing, mri peak at 107, scaling input intensities by 1.000 scaling channel 0 by 1 initial log_p = -4.394 ************************************************ First Search limited to translation only. ************************************************ max log p = -3.983978 @ (-9.091, 9.091, -9.091) max log p = -3.913510 @ (4.545, -4.545, -4.545) max log p = -3.840493 @ (2.273, 2.273, 2.273) max log p = -3.795436 @ (-1.136, 1.136, 3.409) max log p = -3.795436 @ (0.000, 0.000, 0.000) max log p = -3.795436 @ (0.000, 0.000, 0.000) Found translation: (-3.4, 8.0, -8.0): log p = -3.795 **************************************** Nine parameter search. iteration 0 nscales = 0 ... **************************************** Result so far: scale 1.000: max_log_p=-3.463, old_max_log_p =-3.795 (thresh=-3.8) 1.00000 0.00000 0.00000 -3.40909; 0.00000 1.03837 -0.27823 42.73360; 0.00000 0.29764 1.11081 -68.65890; 0.00000 0.00000 0.00000 1.00000; **************************************** Nine parameter search. iteration 1 nscales = 0 ... **************************************** Result so far: scale 1.000: max_log_p=-3.463, old_max_log_p =-3.463 (thresh=-3.5) 1.00000 0.00000 0.00000 -3.40909; 0.00000 1.03837 -0.27823 42.73360; 0.00000 0.29764 1.11081 -68.65890; 0.00000 0.00000 0.00000 1.00000; reducing scale to 0.2500 **************************************** Nine parameter search. iteration 2 nscales = 1 ... **************************************** Result so far: scale 0.250: max_log_p=-3.274, old_max_log_p =-3.463 (thresh=-3.5) 1.05405 0.08236 0.02041 -22.06999; -0.06526 1.03487 -0.28239 52.13599; -0.03157 0.29981 1.10969 -60.89244; 0.00000 0.00000 0.00000 1.00000; **************************************** Nine parameter search. iteration 3 nscales = 1 ... **************************************** Result so far: scale 0.250: max_log_p=-3.274, old_max_log_p =-3.274 (thresh=-3.3) 1.05405 0.08236 0.02041 -22.06999; -0.06526 1.03487 -0.28239 52.13599; -0.03157 0.29981 1.10969 -60.89244; 0.00000 0.00000 0.00000 1.00000; reducing scale to 0.0625 **************************************** Nine parameter search. iteration 4 nscales = 2 ... **************************************** Result so far: scale 0.062: max_log_p=-3.250, old_max_log_p =-3.274 (thresh=-3.3) 1.05287 0.05669 0.02683 -19.03612; -0.03979 1.03891 -0.26299 46.90995; -0.03060 0.28383 1.11808 -59.41410; 0.00000 0.00000 0.00000 1.00000; **************************************** Nine parameter search. iteration 5 nscales = 2 ... **************************************** Result so far: scale 0.062: max_log_p=-3.250, old_max_log_p =-3.250 (thresh=-3.2) 1.05287 0.05669 0.02683 -19.03612; -0.03979 1.03891 -0.26299 46.90995; -0.03060 0.28383 1.11808 -59.41410; 0.00000 0.00000 0.00000 1.00000; min search scale 0.025000 reached *********************************************** Computing MAP estimate using 2830 samples... *********************************************** dt = 5.00e-06, momentum=0.80, tol=1.00e-05 l_intensity = 1.0000 Aligning input volume to GCA... Transform matrix 1.05287 0.05669 0.02683 -19.03612; -0.03979 1.03891 -0.26299 46.90995; -0.03060 0.28383 1.11808 -59.41410; 0.00000 0.00000 0.00000 1.00000; nsamples 2830 Quasinewton: input matrix 1.05287 0.05669 0.02683 -19.03612; -0.03979 1.03891 -0.26299 46.90995; -0.03060 0.28383 1.11808 -59.41410; 0.00000 0.00000 0.00000 1.00000; outof QuasiNewtonEMA: 008: -log(p) = -0.0 tol 0.000010 Resulting transform: 1.05287 0.05669 0.02683 -19.03612; -0.03979 1.03891 -0.26299 46.90995; -0.03060 0.28383 1.11808 -59.41410; 0.00000 0.00000 0.00000 1.00000; pass 1, spacing 8: log(p) = -3.250 (old=-4.394) transform before final EM align: 1.05287 0.05669 0.02683 -19.03612; -0.03979 1.03891 -0.26299 46.90995; -0.03060 0.28383 1.11808 -59.41410; 0.00000 0.00000 0.00000 1.00000; ************************************************** EM alignment process ... Computing final MAP estimate using 315557 samples. ************************************************** dt = 5.00e-06, momentum=0.80, tol=1.00e-07 l_intensity = 1.0000 Aligning input volume to GCA... Transform matrix 1.05287 0.05669 0.02683 -19.03612; -0.03979 1.03891 -0.26299 46.90995; -0.03060 0.28383 1.11808 -59.41410; 0.00000 0.00000 0.00000 1.00000; nsamples 315557 Quasinewton: input matrix 1.05287 0.05669 0.02683 -19.03612; -0.03979 1.03891 -0.26299 46.90995; -0.03060 0.28383 1.11808 -59.41410; 0.00000 0.00000 0.00000 1.00000; outof QuasiNewtonEMA: 010: -log(p) = 3.7 tol 0.000000 final transform: 1.05287 0.05669 0.02683 -19.03612; -0.03979 1.03891 -0.26299 46.90995; -0.03060 0.28383 1.11808 -59.41410; 0.00000 0.00000 0.00000 1.00000; writing output transformation to transforms/talairach.lta... mri_em_register utimesec 698.369063 mri_em_register stimesec 1.403978 mri_em_register ru_maxrss 603452 mri_em_register ru_ixrss 0 mri_em_register ru_idrss 0 mri_em_register ru_isrss 0 mri_em_register ru_minflt 162485 mri_em_register ru_majflt 0 mri_em_register ru_nswap 0 mri_em_register ru_inblock 0 mri_em_register ru_oublock 32 mri_em_register ru_msgsnd 0 mri_em_register ru_msgrcv 0 mri_em_register ru_nsignals 0 mri_em_register ru_nvcsw 0 mri_em_register ru_nivcsw 586 registration took 11 minutes and 40 seconds. #-------------------------------------- #@# CA Normalize Thu 17 Nov 2022 02:13:23 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/mri mri_ca_normalize -c ctrl_pts.mgz -mask brainmask.mgz nu.mgz /opt/freesurfer/average/RB_all_2016-05-10.vc700.gca transforms/talairach.lta norm.mgz writing control point volume to ctrl_pts.mgz using MR volume brainmask.mgz to mask input volume... reading 1 input volume reading atlas from '/opt/freesurfer/average/RB_all_2016-05-10.vc700.gca'... reading transform from 'transforms/talairach.lta'... reading input volume from nu.mgz... resetting wm mean[0]: 98 --> 107 resetting gm mean[0]: 61 --> 61 input volume #1 is the most T1-like using real data threshold=27.1 skull bounding box = (61, 43, 55) --> (198, 155, 203) using (107, 80, 129) as brain centroid... mean wm in atlas = 107, using box (90,66,111) --> (123, 93,147) to find MRI wm before smoothing, mri peak at 107 robust fit to distribution - 107 +- 4.6 after smoothing, mri peak at 107, scaling input intensities by 1.000 scaling channel 0 by 1 using 246344 sample points... INFO: compute sample coordinates transform 1.05287 0.05669 0.02683 -19.03612; -0.03979 1.03891 -0.26299 46.90995; -0.03060 0.28383 1.11808 -59.41410; 0.00000 0.00000 0.00000 1.00000; INFO: transform used finding control points in Left_Cerebral_White_Matter.... found 39915 control points for structure... bounding box (128, 42, 53) --> (193, 159, 199) Left_Cerebral_White_Matter: limiting intensities to 98.0 --> 132.0 0 of 3157 (0.0%) samples deleted finding control points in Right_Cerebral_White_Matter.... found 39557 control points for structure... bounding box (67, 41, 55) --> (131, 158, 200) Right_Cerebral_White_Matter: limiting intensities to 97.0 --> 132.0 0 of 3450 (0.0%) samples deleted finding control points in Left_Cerebellum_White_Matter.... found 3059 control points for structure... bounding box (130, 116, 64) --> (175, 156, 113) Left_Cerebellum_White_Matter: limiting intensities to 91.0 --> 132.0 0 of 203 (0.0%) samples deleted finding control points in Right_Cerebellum_White_Matter.... found 2705 control points for structure... bounding box (86, 116, 63) --> (129, 155, 113) Right_Cerebellum_White_Matter: limiting intensities to 92.0 --> 132.0 0 of 261 (0.0%) samples deleted finding control points in Brain_Stem.... found 3518 control points for structure... bounding box (112, 114, 89) --> (145, 176, 124) Brain_Stem: limiting intensities to 97.0 --> 132.0 31 of 133 (23.3%) samples deleted using 7204 total control points for intensity normalization... bias field = 0.956 +- 0.054 17 of 7173 control points discarded finding control points in Left_Cerebral_White_Matter.... found 39915 control points for structure... bounding box (128, 42, 53) --> (193, 159, 199) Left_Cerebral_White_Matter: limiting intensities to 91.0 --> 132.0 8 of 3877 (0.2%) samples deleted finding control points in Right_Cerebral_White_Matter.... found 39557 control points for structure... bounding box (67, 41, 55) --> (131, 158, 200) Right_Cerebral_White_Matter: limiting intensities to 91.0 --> 132.0 0 of 4082 (0.0%) samples deleted finding control points in Left_Cerebellum_White_Matter.... found 3059 control points for structure... bounding box (130, 116, 64) --> (175, 156, 113) Left_Cerebellum_White_Matter: limiting intensities to 88.0 --> 132.0 50 of 324 (15.4%) samples deleted finding control points in Right_Cerebellum_White_Matter.... found 2705 control points for structure... bounding box (86, 116, 63) --> (129, 155, 113) Right_Cerebellum_White_Matter: limiting intensities to 88.0 --> 132.0 41 of 325 (12.6%) samples deleted finding control points in Brain_Stem.... found 3518 control points for structure... bounding box (112, 114, 89) --> (145, 176, 124) Brain_Stem: limiting intensities to 88.0 --> 132.0 84 of 273 (30.8%) samples deleted using 8881 total control points for intensity normalization... bias field = 1.025 +- 0.046 17 of 8598 control points discarded finding control points in Left_Cerebral_White_Matter.... found 39915 control points for structure... bounding box (128, 42, 53) --> (193, 159, 199) Left_Cerebral_White_Matter: limiting intensities to 92.0 --> 132.0 2 of 3780 (0.1%) samples deleted finding control points in Right_Cerebral_White_Matter.... found 39557 control points for structure... bounding box (67, 41, 55) --> (131, 158, 200) Right_Cerebral_White_Matter: limiting intensities to 90.0 --> 132.0 3 of 4062 (0.1%) samples deleted finding control points in Left_Cerebellum_White_Matter.... found 3059 control points for structure... bounding box (130, 116, 64) --> (175, 156, 113) Left_Cerebellum_White_Matter: limiting intensities to 88.0 --> 132.0 119 of 375 (31.7%) samples deleted finding control points in Right_Cerebellum_White_Matter.... found 2705 control points for structure... bounding box (86, 116, 63) --> (129, 155, 113) Right_Cerebellum_White_Matter: limiting intensities to 88.0 --> 132.0 175 of 359 (48.7%) samples deleted finding control points in Brain_Stem.... found 3518 control points for structure... bounding box (112, 114, 89) --> (145, 176, 124) Brain_Stem: limiting intensities to 88.0 --> 132.0 206 of 365 (56.4%) samples deleted using 8941 total control points for intensity normalization... bias field = 1.025 +- 0.039 6 of 8277 control points discarded writing normalized volume to norm.mgz... writing control points to ctrl_pts.mgz freeing GCA...done. normalization took 0 minutes and 56 seconds. #-------------------------------------- #@# CA Reg Thu 17 Nov 2022 02:14:18 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/mri mri_ca_register -rusage /home/shenkang/Desktop/T1/RESULTS/sub057/touch/rusage.mri_ca_register.dat -nobigventricles -T transforms/talairach.lta -align-after -mask brainmask.mgz norm.mgz /opt/freesurfer/average/RB_all_2016-05-10.vc700.gca transforms/talairach.m3z not handling expanded ventricles... using previously computed transform transforms/talairach.lta renormalizing sequences with structure alignment, equivalent to: -renormalize -regularize_mean 0.500 -regularize 0.500 using MR volume brainmask.mgz to mask input volume... == Number of threads available to mri_ca_register for OpenMP = 1 == reading 1 input volumes... logging results to talairach.log reading input volume 'norm.mgz'... reading GCA '/opt/freesurfer/average/RB_all_2016-05-10.vc700.gca'... label assignment complete, 0 changed (0.00%) det(m_affine) = 1.31 (predicted orig area = 6.1) label assignment complete, 0 changed (0.00%) freeing gibbs priors...done. average std[0] = 5.0 **************** pass 1 of 1 ************************ enabling zero nodes setting smoothness coefficient to 0.039 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.765, neg=0, invalid=762 0001: dt=261.087146, rms=0.714 (6.763%), neg=0, invalid=762 0002: dt=179.826087, rms=0.702 (1.601%), neg=0, invalid=762 0003: dt=194.400000, rms=0.696 (0.939%), neg=0, invalid=762 0004: dt=148.512821, rms=0.692 (0.548%), neg=0, invalid=762 0005: dt=443.904000, rms=0.687 (0.724%), neg=0, invalid=762 0006: dt=110.976000, rms=0.683 (0.509%), neg=0, invalid=762 0007: dt=887.808000, rms=0.678 (0.781%), neg=0, invalid=762 0008: dt=110.976000, rms=0.675 (0.410%), neg=0, invalid=762 0009: dt=517.888000, rms=0.673 (0.317%), neg=0, invalid=762 0010: dt=110.976000, rms=0.672 (0.187%), neg=0, invalid=762 0011: dt=110.976000, rms=0.671 (0.077%), neg=0, invalid=762 0012: dt=110.976000, rms=0.670 (0.143%), neg=0, invalid=762 0013: dt=110.976000, rms=0.669 (0.195%), neg=0, invalid=762 0014: dt=110.976000, rms=0.667 (0.231%), neg=0, invalid=762 0015: dt=110.976000, rms=0.666 (0.259%), neg=0, invalid=762 0016: dt=110.976000, rms=0.664 (0.283%), neg=0, invalid=762 0017: dt=110.976000, rms=0.662 (0.264%), neg=0, invalid=762 0018: dt=110.976000, rms=0.661 (0.235%), neg=0, invalid=762 0019: dt=110.976000, rms=0.659 (0.222%), neg=0, invalid=762 0020: dt=110.976000, rms=0.658 (0.213%), neg=0, invalid=762 0021: dt=110.976000, rms=0.656 (0.211%), neg=0, invalid=762 0022: dt=110.976000, rms=0.655 (0.201%), neg=0, invalid=762 0023: dt=110.976000, rms=0.654 (0.174%), neg=0, invalid=762 0024: dt=110.976000, rms=0.653 (0.153%), neg=0, invalid=762 0025: dt=110.976000, rms=0.652 (0.136%), neg=0, invalid=762 0026: dt=110.976000, rms=0.651 (0.138%), neg=0, invalid=762 0027: dt=110.976000, rms=0.650 (0.137%), neg=0, invalid=762 0028: dt=110.976000, rms=0.649 (0.130%), neg=0, invalid=762 0029: dt=110.976000, rms=0.649 (0.119%), neg=0, invalid=762 0030: dt=110.976000, rms=0.648 (0.107%), neg=0, invalid=762 0031: dt=517.888000, rms=0.648 (0.039%), neg=0, invalid=762 0032: dt=517.888000, rms=0.648 (-0.134%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.648, neg=0, invalid=762 0033: dt=55.488000, rms=0.648 (0.085%), neg=0, invalid=762 0034: dt=110.976000, rms=0.647 (0.010%), neg=0, invalid=762 0035: dt=110.976000, rms=0.647 (0.016%), neg=0, invalid=762 0036: dt=110.976000, rms=0.647 (0.016%), neg=0, invalid=762 0037: dt=110.976000, rms=0.647 (0.024%), neg=0, invalid=762 0038: dt=110.976000, rms=0.647 (0.025%), neg=0, invalid=762 0039: dt=110.976000, rms=0.647 (0.032%), neg=0, invalid=762 0040: dt=110.976000, rms=0.646 (0.062%), neg=0, invalid=762 0041: dt=110.976000, rms=0.646 (0.072%), neg=0, invalid=762 0042: dt=110.976000, rms=0.645 (0.063%), neg=0, invalid=762 setting smoothness coefficient to 0.154 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.650, neg=0, invalid=762 0043: dt=184.721569, rms=0.642 (1.302%), neg=0, invalid=762 0044: dt=117.050916, rms=0.635 (1.008%), neg=0, invalid=762 0045: dt=66.898955, rms=0.632 (0.488%), neg=0, invalid=762 0046: dt=331.776000, rms=0.625 (1.095%), neg=0, invalid=762 0047: dt=53.573034, rms=0.622 (0.596%), neg=0, invalid=762 0048: dt=995.328000, rms=0.610 (1.826%), neg=0, invalid=762 0049: dt=56.000000, rms=0.607 (0.506%), neg=0, invalid=762 0050: dt=145.152000, rms=0.606 (0.185%), neg=0, invalid=762 0051: dt=145.152000, rms=0.606 (-0.151%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.607, neg=0, invalid=762 0052: dt=92.195804, rms=0.605 (0.290%), neg=0, invalid=762 0053: dt=124.416000, rms=0.604 (0.138%), neg=0, invalid=762 0054: dt=124.416000, rms=0.604 (-0.041%), neg=0, invalid=762 setting smoothness coefficient to 0.588 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.622, neg=0, invalid=762 0055: dt=11.200000, rms=0.620 (0.313%), neg=0, invalid=762 0056: dt=11.200000, rms=0.620 (0.092%), neg=0, invalid=762 0057: dt=11.200000, rms=0.620 (0.064%), neg=0, invalid=762 0058: dt=11.200000, rms=0.619 (0.040%), neg=0, invalid=762 0059: dt=11.200000, rms=0.619 (-0.033%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.620, neg=0, invalid=762 0060: dt=0.700000, rms=0.619 (0.105%), neg=0, invalid=762 0061: dt=0.175000, rms=0.619 (-0.001%), neg=0, invalid=762 setting smoothness coefficient to 2.000 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.656, neg=0, invalid=762 0062: dt=3.073171, rms=0.654 (0.317%), neg=0, invalid=762 0063: dt=1.008000, rms=0.654 (0.010%), neg=0, invalid=762 0064: dt=1.008000, rms=0.654 (-0.009%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.655, neg=0, invalid=762 0065: dt=0.000000, rms=0.654 (0.085%), neg=0, invalid=762 0066: dt=0.000000, rms=0.654 (0.000%), neg=0, invalid=762 setting smoothness coefficient to 5.000 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.711, neg=0, invalid=762 0067: dt=1.280000, rms=0.707 (0.634%), neg=0, invalid=762 0068: dt=1.792000, rms=0.704 (0.370%), neg=0, invalid=762 0069: dt=1.536000, rms=0.703 (0.184%), neg=0, invalid=762 0070: dt=1.536000, rms=0.702 (0.041%), neg=0, invalid=762 0071: dt=1.536000, rms=0.702 (0.068%), neg=0, invalid=762 0072: dt=1.536000, rms=0.702 (-0.292%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.702, neg=0, invalid=762 0073: dt=1.536000, rms=0.701 (0.256%), neg=0, invalid=762 0074: dt=0.096000, rms=0.701 (0.001%), neg=0, invalid=762 0075: dt=0.096000, rms=0.701 (-0.001%), neg=0, invalid=762 resetting metric properties... setting smoothness coefficient to 10.000 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.667, neg=0, invalid=762 0076: dt=0.831650, rms=0.649 (2.599%), neg=0, invalid=762 0077: dt=0.080000, rms=0.648 (0.151%), neg=0, invalid=762 0078: dt=0.080000, rms=0.648 (-0.078%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.649, neg=0, invalid=762 0079: dt=0.028000, rms=0.648 (0.103%), neg=0, invalid=762 0080: dt=0.007000, rms=0.648 (0.001%), neg=0, invalid=762 0081: dt=0.007000, rms=0.648 (-0.000%), neg=0, invalid=762 renormalizing by structure alignment.... renormalizing input #0 gca peak = 0.10027 (20) mri peak = 0.19892 ( 8) Left_Lateral_Ventricle (4): linear fit = 0.32 x + 0.0 (612 voxels, overlap=0.005) Left_Lateral_Ventricle (4): linear fit = 0.40 x + 0.0 (612 voxels, peak = 6), gca=8.0 gca peak = 0.15565 (16) mri peak = 0.24265 ( 8) Right_Lateral_Ventricle (43): linear fit = 0.44 x + 0.0 (628 voxels, overlap=0.005) Right_Lateral_Ventricle (43): linear fit = 0.44 x + 0.0 (628 voxels, peak = 7), gca=7.0 gca peak = 0.26829 (96) mri peak = 0.08398 (87) Right_Pallidum (52): linear fit = 0.89 x + 0.0 (858 voxels, overlap=0.110) Right_Pallidum (52): linear fit = 0.89 x + 0.0 (858 voxels, peak = 86), gca=85.9 gca peak = 0.20183 (93) mri peak = 0.08837 (87) Left_Pallidum (13): linear fit = 0.92 x + 0.0 (778 voxels, overlap=0.590) Left_Pallidum (13): linear fit = 0.92 x + 0.0 (778 voxels, peak = 85), gca=85.1 gca peak = 0.21683 (55) mri peak = 0.12314 (59) Right_Hippocampus (53): linear fit = 1.05 x + 0.0 (786 voxels, overlap=0.933) Right_Hippocampus (53): linear fit = 1.05 x + 0.0 (786 voxels, peak = 58), gca=58.0 gca peak = 0.30730 (58) mri peak = 0.11765 (60) Left_Hippocampus (17): linear fit = 1.02 x + 0.0 (893 voxels, overlap=0.994) Left_Hippocampus (17): linear fit = 1.02 x + 0.0 (893 voxels, peak = 59), gca=59.4 gca peak = 0.11430 (101) mri peak = 0.11058 (105) Right_Cerebral_White_Matter (41): linear fit = 1.03 x + 0.0 (48258 voxels, overlap=0.619) Right_Cerebral_White_Matter (41): linear fit = 1.03 x + 0.0 (48258 voxels, peak = 105), gca=104.5 gca peak = 0.12076 (102) mri peak = 0.10983 (105) Left_Cerebral_White_Matter (2): linear fit = 1.04 x + 0.0 (50519 voxels, overlap=0.587) Left_Cerebral_White_Matter (2): linear fit = 1.04 x + 0.0 (50519 voxels, peak = 107), gca=106.6 gca peak = 0.14995 (59) mri peak = 0.06310 (58) Left_Cerebral_Cortex (3): linear fit = 0.99 x + 0.0 (25753 voxels, overlap=0.995) Left_Cerebral_Cortex (3): linear fit = 0.99 x + 0.0 (25753 voxels, peak = 58), gca=58.1 gca peak = 0.15082 (58) mri peak = 0.05858 (59) Right_Cerebral_Cortex (42): linear fit = 0.96 x + 0.0 (25411 voxels, overlap=0.979) Right_Cerebral_Cortex (42): linear fit = 0.96 x + 0.0 (25411 voxels, peak = 56), gca=56.0 gca peak = 0.14161 (67) mri peak = 0.15789 (70) Right_Caudate (50): linear fit = 1.03 x + 0.0 (969 voxels, overlap=0.875) Right_Caudate (50): linear fit = 1.03 x + 0.0 (969 voxels, peak = 69), gca=69.3 gca peak = 0.15243 (71) mri peak = 0.14858 (70) Left_Caudate (11): linear fit = 0.98 x + 0.0 (949 voxels, overlap=0.747) Left_Caudate (11): linear fit = 0.98 x + 0.0 (949 voxels, peak = 69), gca=69.2 gca peak = 0.13336 (57) mri peak = 0.04671 (56) Left_Cerebellum_Cortex (8): linear fit = 1.04 x + 0.0 (25215 voxels, overlap=0.977) Left_Cerebellum_Cortex (8): linear fit = 1.04 x + 0.0 (25215 voxels, peak = 60), gca=59.6 gca peak = 0.13252 (56) mri peak = 0.05224 (59) Right_Cerebellum_Cortex (47): linear fit = 1.07 x + 0.0 (26147 voxels, overlap=0.923) Right_Cerebellum_Cortex (47): linear fit = 1.07 x + 0.0 (26147 voxels, peak = 60), gca=59.6 gca peak = 0.18181 (84) mri peak = 0.07590 (89) Left_Cerebellum_White_Matter (7): linear fit = 1.07 x + 0.0 (8121 voxels, overlap=0.730) Left_Cerebellum_White_Matter (7): linear fit = 1.07 x + 0.0 (8121 voxels, peak = 89), gca=89.5 gca peak = 0.20573 (83) mri peak = 0.09052 (88) Right_Cerebellum_White_Matter (46): linear fit = 1.05 x + 0.0 (7216 voxels, overlap=0.580) Right_Cerebellum_White_Matter (46): linear fit = 1.05 x + 0.0 (7216 voxels, peak = 88), gca=87.6 gca peak = 0.21969 (57) mri peak = 0.12968 (56) Left_Amygdala (18): linear fit = 0.99 x + 0.0 (405 voxels, overlap=0.998) Left_Amygdala (18): linear fit = 0.99 x + 0.0 (405 voxels, peak = 56), gca=56.1 gca peak = 0.39313 (56) mri peak = 0.15161 (59) Right_Amygdala (54): linear fit = 1.04 x + 0.0 (484 voxels, overlap=0.996) Right_Amygdala (54): linear fit = 1.04 x + 0.0 (484 voxels, peak = 59), gca=58.5 gca peak = 0.14181 (85) mri peak = 0.06931 (82) Left_Thalamus_Proper (10): linear fit = 0.95 x + 0.0 (4898 voxels, overlap=0.881) Left_Thalamus_Proper (10): linear fit = 0.95 x + 0.0 (4898 voxels, peak = 81), gca=81.2 gca peak = 0.11978 (83) mri peak = 0.07071 (79) Right_Thalamus_Proper (49): linear fit = 1.01 x + 0.0 (4333 voxels, overlap=0.926) Right_Thalamus_Proper (49): linear fit = 1.01 x + 0.0 (4333 voxels, peak = 84), gca=84.2 gca peak = 0.13399 (79) mri peak = 0.09517 (75) Left_Putamen (12): linear fit = 0.96 x + 0.0 (2185 voxels, overlap=0.845) Left_Putamen (12): linear fit = 0.96 x + 0.0 (2185 voxels, peak = 76), gca=76.2 gca peak = 0.14159 (79) mri peak = 0.11164 (77) Right_Putamen (51): linear fit = 0.99 x + 0.0 (2301 voxels, overlap=0.959) Right_Putamen (51): linear fit = 0.99 x + 0.0 (2301 voxels, peak = 78), gca=77.8 gca peak = 0.10025 (80) mri peak = 0.08701 (84) Brain_Stem (16): linear fit = 1.10 x + 0.0 (11006 voxels, overlap=0.402) Brain_Stem (16): linear fit = 1.10 x + 0.0 (11006 voxels, peak = 88), gca=87.6 gca peak = 0.13281 (86) mri peak = 0.07259 (90) Right_VentralDC (60): linear fit = 1.03 x + 0.0 (1289 voxels, overlap=0.725) Right_VentralDC (60): linear fit = 1.03 x + 0.0 (1289 voxels, peak = 89), gca=89.0 gca peak = 0.12801 (89) mri peak = 0.07834 (89) Left_VentralDC (28): linear fit = 1.02 x + 0.0 (1456 voxels, overlap=0.850) Left_VentralDC (28): linear fit = 1.02 x + 0.0 (1456 voxels, peak = 91), gca=91.2 gca peak = 0.20494 (23) mri peak = 0.21622 (11) gca peak = 0.15061 (21) mri peak = 0.15485 (12) Fourth_Ventricle (15): linear fit = 0.51 x + 0.0 (269 voxels, overlap=0.180) Fourth_Ventricle (15): linear fit = 0.51 x + 0.0 (269 voxels, peak = 11), gca=10.8 gca peak Unknown = 0.94835 ( 0) gca peak Left_Inf_Lat_Vent = 0.18056 (32) gca peak Left_Thalamus = 0.64095 (94) gca peak Third_Ventricle = 0.20494 (23) gca peak Fourth_Ventricle = 0.15061 (21) gca peak CSF = 0.20999 (34) gca peak Left_Accumbens_area = 0.39030 (62) gca peak Left_undetermined = 0.95280 (25) gca peak Left_vessel = 0.67734 (53) gca peak Left_choroid_plexus = 0.09433 (44) gca peak Right_Inf_Lat_Vent = 0.23544 (26) gca peak Right_Accumbens_area = 0.30312 (64) gca peak Right_vessel = 0.46315 (51) gca peak Right_choroid_plexus = 0.14086 (44) gca peak Fifth_Ventricle = 0.51669 (36) gca peak WM_hypointensities = 0.09722 (76) gca peak non_WM_hypointensities = 0.11899 (47) gca peak Optic_Chiasm = 0.39033 (72) label assignment complete, 0 changed (0.00%) not using caudate to estimate GM means estimating mean gm scale to be 1.01 x + 0.0 estimating mean wm scale to be 1.04 x + 0.0 estimating mean csf scale to be 0.42 x + 0.0 saving intensity scales to talairach.label_intensities.txt **************** pass 1 of 1 ************************ enabling zero nodes setting smoothness coefficient to 0.008 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.675, neg=0, invalid=762 0082: dt=186.137405, rms=0.665 (1.512%), neg=0, invalid=762 0083: dt=369.920000, rms=0.662 (0.538%), neg=0, invalid=762 0084: dt=129.472000, rms=0.659 (0.372%), neg=0, invalid=762 0085: dt=295.936000, rms=0.658 (0.156%), neg=0, invalid=762 0086: dt=129.472000, rms=0.656 (0.236%), neg=0, invalid=762 0087: dt=129.472000, rms=0.656 (0.080%), neg=0, invalid=762 0088: dt=517.888000, rms=0.655 (0.215%), neg=0, invalid=762 0089: dt=92.480000, rms=0.653 (0.173%), neg=0, invalid=762 0090: dt=443.904000, rms=0.653 (0.118%), neg=0, invalid=762 0091: dt=92.480000, rms=0.652 (0.139%), neg=0, invalid=762 0092: dt=369.920000, rms=0.651 (0.095%), neg=0, invalid=762 0093: dt=110.976000, rms=0.651 (0.092%), neg=0, invalid=762 0094: dt=129.472000, rms=0.650 (0.042%), neg=0, invalid=762 0095: dt=129.472000, rms=0.650 (0.060%), neg=0, invalid=762 0096: dt=129.472000, rms=0.649 (0.073%), neg=0, invalid=762 0097: dt=129.472000, rms=0.649 (0.105%), neg=0, invalid=762 0098: dt=129.472000, rms=0.648 (0.114%), neg=0, invalid=762 0099: dt=129.472000, rms=0.647 (0.142%), neg=0, invalid=762 0100: dt=129.472000, rms=0.646 (0.129%), neg=0, invalid=762 0101: dt=129.472000, rms=0.645 (0.127%), neg=0, invalid=762 0102: dt=129.472000, rms=0.645 (0.115%), neg=0, invalid=762 0103: dt=129.472000, rms=0.644 (0.122%), neg=0, invalid=762 0104: dt=129.472000, rms=0.643 (0.106%), neg=0, invalid=762 0105: dt=129.472000, rms=0.643 (0.095%), neg=0, invalid=762 0106: dt=129.472000, rms=0.642 (0.090%), neg=0, invalid=762 0107: dt=129.472000, rms=0.641 (0.079%), neg=0, invalid=762 0108: dt=129.472000, rms=0.641 (0.073%), neg=0, invalid=762 0109: dt=129.472000, rms=0.641 (0.071%), neg=0, invalid=762 0110: dt=129.472000, rms=0.640 (0.065%), neg=0, invalid=762 0111: dt=129.472000, rms=0.640 (0.063%), neg=0, invalid=762 0112: dt=129.472000, rms=0.639 (0.061%), neg=0, invalid=762 0113: dt=129.472000, rms=0.639 (0.056%), neg=0, invalid=762 0114: dt=129.472000, rms=0.639 (0.054%), neg=0, invalid=762 0115: dt=129.472000, rms=0.638 (0.051%), neg=0, invalid=762 0116: dt=129.472000, rms=0.638 (0.049%), neg=0, invalid=762 0117: dt=129.472000, rms=0.638 (0.049%), neg=0, invalid=762 0118: dt=129.472000, rms=0.637 (0.048%), neg=0, invalid=762 0119: dt=129.472000, rms=0.637 (0.049%), neg=0, invalid=762 0120: dt=129.472000, rms=0.637 (0.046%), neg=0, invalid=762 0121: dt=129.472000, rms=0.636 (0.045%), neg=0, invalid=762 0122: dt=129.472000, rms=0.636 (0.044%), neg=0, invalid=762 0123: dt=129.472000, rms=0.636 (0.045%), neg=0, invalid=762 0124: dt=129.472000, rms=0.636 (0.046%), neg=0, invalid=762 0125: dt=129.472000, rms=0.635 (0.045%), neg=0, invalid=762 0126: dt=129.472000, rms=0.635 (0.042%), neg=0, invalid=762 0127: dt=129.472000, rms=0.635 (0.040%), neg=0, invalid=762 0128: dt=129.472000, rms=0.635 (0.038%), neg=0, invalid=762 0129: dt=129.472000, rms=0.634 (0.039%), neg=0, invalid=762 0130: dt=129.472000, rms=0.634 (0.040%), neg=0, invalid=762 0131: dt=129.472000, rms=0.634 (0.040%), neg=0, invalid=762 0132: dt=129.472000, rms=0.634 (0.037%), neg=0, invalid=762 0133: dt=129.472000, rms=0.633 (0.030%), neg=0, invalid=762 0134: dt=129.472000, rms=0.633 (0.030%), neg=0, invalid=762 0135: dt=129.472000, rms=0.633 (0.032%), neg=0, invalid=762 0136: dt=129.472000, rms=0.633 (0.030%), neg=0, invalid=762 0137: dt=129.472000, rms=0.633 (0.028%), neg=0, invalid=762 0138: dt=129.472000, rms=0.632 (0.024%), neg=0, invalid=762 0139: dt=129.472000, rms=0.632 (0.024%), neg=0, invalid=762 0140: dt=129.472000, rms=0.632 (0.026%), neg=0, invalid=762 0141: dt=129.472000, rms=0.632 (0.024%), neg=0, invalid=762 0142: dt=129.472000, rms=0.632 (0.021%), neg=0, invalid=762 0143: dt=129.472000, rms=0.632 (0.000%), neg=0, invalid=762 0144: dt=129.472000, rms=0.632 (0.001%), neg=0, invalid=762 0145: dt=129.472000, rms=0.632 (0.003%), neg=0, invalid=762 0146: dt=129.472000, rms=0.632 (0.008%), neg=0, invalid=762 0147: dt=129.472000, rms=0.632 (0.009%), neg=0, invalid=762 0148: dt=129.472000, rms=0.632 (0.010%), neg=0, invalid=762 0149: dt=129.472000, rms=0.632 (0.010%), neg=0, invalid=762 0150: dt=129.472000, rms=0.632 (0.011%), neg=0, invalid=762 0151: dt=129.472000, rms=0.631 (0.012%), neg=0, invalid=762 0152: dt=129.472000, rms=0.631 (0.011%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.632, neg=0, invalid=762 0153: dt=129.472000, rms=0.631 (0.228%), neg=0, invalid=762 0154: dt=369.920000, rms=0.630 (0.089%), neg=0, invalid=762 0155: dt=92.480000, rms=0.630 (0.010%), neg=0, invalid=762 0156: dt=92.480000, rms=0.630 (0.009%), neg=0, invalid=762 0157: dt=92.480000, rms=0.630 (0.013%), neg=0, invalid=762 0158: dt=92.480000, rms=0.630 (0.021%), neg=0, invalid=762 0159: dt=92.480000, rms=0.630 (0.023%), neg=0, invalid=762 0160: dt=92.480000, rms=0.629 (0.024%), neg=0, invalid=762 0161: dt=92.480000, rms=0.629 (0.020%), neg=0, invalid=762 0162: dt=92.480000, rms=0.629 (0.016%), neg=0, invalid=762 0163: dt=1479.680000, rms=0.629 (0.023%), neg=0, invalid=762 0164: dt=129.472000, rms=0.629 (0.015%), neg=0, invalid=762 setting smoothness coefficient to 0.031 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.631, neg=0, invalid=762 0165: dt=92.496350, rms=0.627 (0.536%), neg=0, invalid=762 0166: dt=200.966184, rms=0.620 (1.196%), neg=0, invalid=762 0167: dt=36.288000, rms=0.617 (0.472%), neg=0, invalid=762 0168: dt=103.680000, rms=0.616 (0.205%), neg=0, invalid=762 0169: dt=175.381215, rms=0.611 (0.815%), neg=0, invalid=762 0170: dt=31.104000, rms=0.609 (0.269%), neg=0, invalid=762 0171: dt=36.288000, rms=0.609 (0.057%), neg=0, invalid=762 0172: dt=580.608000, rms=0.603 (0.883%), neg=0, invalid=762 0173: dt=76.605005, rms=0.598 (0.790%), neg=0, invalid=762 0174: dt=20.736000, rms=0.598 (0.072%), neg=0, invalid=762 0175: dt=25.920000, rms=0.598 (0.008%), neg=0, invalid=762 0176: dt=25.920000, rms=0.598 (0.023%), neg=0, invalid=762 0177: dt=25.920000, rms=0.598 (0.045%), neg=0, invalid=762 0178: dt=25.920000, rms=0.597 (0.064%), neg=0, invalid=762 0179: dt=25.920000, rms=0.596 (0.131%), neg=0, invalid=762 0180: dt=25.920000, rms=0.595 (0.188%), neg=0, invalid=762 0181: dt=25.920000, rms=0.594 (0.199%), neg=0, invalid=762 0182: dt=25.920000, rms=0.593 (0.194%), neg=0, invalid=762 0183: dt=25.920000, rms=0.592 (0.179%), neg=0, invalid=762 0184: dt=25.920000, rms=0.591 (0.196%), neg=0, invalid=762 0185: dt=25.920000, rms=0.590 (0.176%), neg=0, invalid=762 0186: dt=25.920000, rms=0.589 (0.179%), neg=0, invalid=762 0187: dt=25.920000, rms=0.587 (0.201%), neg=0, invalid=762 0188: dt=25.920000, rms=0.586 (0.199%), neg=0, invalid=762 0189: dt=25.920000, rms=0.585 (0.190%), neg=0, invalid=762 0190: dt=25.920000, rms=0.585 (0.006%), neg=0, invalid=762 0191: dt=25.920000, rms=0.585 (0.031%), neg=0, invalid=762 0192: dt=25.920000, rms=0.585 (0.039%), neg=0, invalid=762 0193: dt=25.920000, rms=0.584 (0.063%), neg=0, invalid=762 0194: dt=25.920000, rms=0.584 (0.032%), neg=0, invalid=762 0195: dt=25.920000, rms=0.584 (0.013%), neg=0, invalid=762 0196: dt=6.480000, rms=0.584 (0.003%), neg=0, invalid=762 0197: dt=2.268000, rms=0.584 (0.002%), neg=0, invalid=762 0198: dt=2.268000, rms=0.584 (0.002%), neg=0, invalid=762 0199: dt=0.567000, rms=0.584 (0.000%), neg=0, invalid=762 0200: dt=0.141750, rms=0.584 (-0.000%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.585, neg=0, invalid=762 0201: dt=102.981818, rms=0.582 (0.524%), neg=0, invalid=762 0202: dt=36.288000, rms=0.581 (0.132%), neg=0, invalid=762 0203: dt=331.776000, rms=0.579 (0.317%), neg=0, invalid=762 0204: dt=31.104000, rms=0.579 (0.093%), neg=0, invalid=762 0205: dt=7.776000, rms=0.579 (0.028%), neg=0, invalid=762 0206: dt=0.972000, rms=0.579 (0.001%), neg=0, invalid=762 0207: dt=0.015187, rms=0.579 (0.000%), neg=0, invalid=762 0208: dt=0.000949, rms=0.579 (0.000%), neg=0, invalid=762 0209: dt=0.000000, rms=0.579 (0.000%), neg=0, invalid=762 setting smoothness coefficient to 0.118 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.585, neg=0, invalid=762 0210: dt=11.200000, rms=0.581 (0.733%), neg=0, invalid=762 0211: dt=11.200000, rms=0.578 (0.504%), neg=0, invalid=762 0212: dt=11.200000, rms=0.575 (0.461%), neg=0, invalid=762 0213: dt=2.800000, rms=0.575 (0.111%), neg=0, invalid=762 0214: dt=2.400000, rms=0.574 (0.092%), neg=0, invalid=762 0215: dt=0.150000, rms=0.574 (0.005%), neg=0, invalid=762 0216: dt=0.009375, rms=0.574 (0.000%), neg=0, invalid=762 0217: dt=0.001172, rms=0.574 (0.000%), neg=0, invalid=762 0218: dt=0.000293, rms=0.574 (0.000%), neg=0, invalid=762 0219: dt=0.000000, rms=0.574 (0.000%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.575, neg=0, invalid=762 0220: dt=2.800000, rms=0.574 (0.296%), neg=0, invalid=762 0221: dt=2.800000, rms=0.573 (0.120%), neg=0, invalid=762 0222: dt=0.700000, rms=0.573 (0.031%), neg=0, invalid=762 0223: dt=0.175000, rms=0.573 (0.006%), neg=0, invalid=762 0224: dt=0.087500, rms=0.573 (0.004%), neg=0, invalid=762 0225: dt=0.043750, rms=0.573 (0.002%), neg=0, invalid=762 0226: dt=0.010937, rms=0.573 (0.000%), neg=0, invalid=762 setting smoothness coefficient to 0.400 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.592, neg=0, invalid=762 0227: dt=4.032000, rms=0.582 (1.574%), neg=0, invalid=762 0228: dt=2.880000, rms=0.578 (0.801%), neg=0, invalid=762 0229: dt=0.252000, rms=0.577 (0.057%), neg=0, invalid=762 0230: dt=0.063000, rms=0.577 (0.016%), neg=0, invalid=762 0231: dt=0.031500, rms=0.577 (0.010%), neg=0, invalid=762 0232: dt=0.007875, rms=0.577 (0.002%), neg=0, invalid=762 0233: dt=0.001969, rms=0.577 (0.000%), neg=0, invalid=762 0234: dt=0.000984, rms=0.577 (0.000%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.578, neg=0, invalid=762 0235: dt=0.000844, rms=0.577 (0.156%), neg=0, invalid=762 0236: dt=0.000000, rms=0.577 (0.000%), neg=0, invalid=762 0237: dt=0.000018, rms=0.577 (0.000%), neg=0, invalid=762 0238: dt=0.000002, rms=0.577 (0.000%), neg=0, invalid=762 0239: dt=0.000002, rms=0.577 (0.000%), neg=0, invalid=762 0240: dt=0.000000, rms=0.577 (0.000%), neg=0, invalid=762 setting smoothness coefficient to 1.000 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.613, neg=0, invalid=762 0241: dt=1.792000, rms=0.606 (1.213%), neg=0, invalid=762 0242: dt=1.536000, rms=0.603 (0.485%), neg=0, invalid=762 0243: dt=0.080000, rms=0.603 (0.016%), neg=0, invalid=762 0244: dt=0.010000, rms=0.603 (0.002%), neg=0, invalid=762 0245: dt=0.001250, rms=0.603 (0.000%), neg=0, invalid=762 0246: dt=0.000039, rms=0.603 (0.000%), neg=0, invalid=762 0247: dt=0.000000, rms=0.603 (-0.000%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.604, neg=0, invalid=762 0248: dt=0.000000, rms=0.603 (0.136%), neg=0, invalid=762 0249: dt=0.000000, rms=0.603 (0.000%), neg=0, invalid=762 0250: dt=0.000024, rms=0.603 (0.000%), neg=0, invalid=762 0251: dt=0.000006, rms=0.603 (0.000%), neg=0, invalid=762 0252: dt=0.000000, rms=0.603 (0.000%), neg=0, invalid=762 resetting metric properties... setting smoothness coefficient to 2.000 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.552, neg=0, invalid=762 0253: dt=0.448000, rms=0.536 (2.835%), neg=0, invalid=762 0254: dt=0.448000, rms=0.532 (0.721%), neg=0, invalid=762 0255: dt=0.448000, rms=0.530 (0.437%), neg=0, invalid=762 0256: dt=0.448000, rms=0.529 (0.275%), neg=0, invalid=762 0257: dt=0.448000, rms=0.528 (0.207%), neg=0, invalid=762 0258: dt=0.500000, rms=0.527 (0.166%), neg=0, invalid=762 0259: dt=0.448000, rms=0.526 (0.123%), neg=0, invalid=762 0260: dt=0.448000, rms=0.526 (0.090%), neg=0, invalid=762 0261: dt=0.448000, rms=0.525 (0.083%), neg=0, invalid=762 0262: dt=0.448000, rms=0.525 (0.060%), neg=0, invalid=762 0263: dt=0.448000, rms=0.525 (0.061%), neg=0, invalid=762 0264: dt=0.448000, rms=0.524 (0.040%), neg=0, invalid=762 0265: dt=0.448000, rms=0.524 (0.044%), neg=0, invalid=762 0266: dt=0.448000, rms=0.524 (0.068%), neg=0, invalid=762 0267: dt=0.224000, rms=0.524 (0.010%), neg=0, invalid=762 0268: dt=0.224000, rms=0.523 (0.029%), neg=0, invalid=762 0269: dt=0.224000, rms=0.523 (0.037%), neg=0, invalid=762 0270: dt=0.224000, rms=0.523 (0.036%), neg=0, invalid=762 0271: dt=0.224000, rms=0.523 (0.008%), neg=0, invalid=762 0272: dt=0.224000, rms=0.523 (0.010%), neg=0, invalid=762 0273: dt=0.224000, rms=0.523 (0.019%), neg=0, invalid=762 0274: dt=0.224000, rms=0.523 (0.020%), neg=0, invalid=762 0275: dt=0.224000, rms=0.523 (0.021%), neg=0, invalid=762 0276: dt=0.224000, rms=0.523 (0.003%), neg=0, invalid=762 0277: dt=0.384000, rms=0.523 (0.005%), neg=0, invalid=762 0278: dt=0.256000, rms=0.523 (0.007%), neg=0, invalid=762 0279: dt=0.320000, rms=0.523 (0.004%), neg=0, invalid=762 0280: dt=0.320000, rms=0.523 (0.002%), neg=0, invalid=762 0281: dt=0.320000, rms=0.523 (0.003%), neg=0, invalid=762 0282: dt=0.320000, rms=0.523 (0.009%), neg=0, invalid=762 0283: dt=0.320000, rms=0.522 (0.007%), neg=0, invalid=762 0284: dt=0.320000, rms=0.522 (0.004%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.523, neg=0, invalid=762 0285: dt=0.384000, rms=0.518 (1.003%), neg=0, invalid=762 0286: dt=0.384000, rms=0.517 (0.213%), neg=0, invalid=762 0287: dt=0.384000, rms=0.517 (0.078%), neg=0, invalid=762 0288: dt=0.384000, rms=0.516 (0.030%), neg=0, invalid=762 0289: dt=0.192000, rms=0.516 (0.009%), neg=0, invalid=762 0290: dt=0.192000, rms=0.516 (0.013%), neg=0, invalid=762 0291: dt=0.192000, rms=0.516 (0.009%), neg=0, invalid=762 0292: dt=0.192000, rms=0.516 (0.005%), neg=0, invalid=762 0293: dt=0.000000, rms=0.516 (0.000%), neg=0, invalid=762 label assignment complete, 0 changed (0.00%) ********************* ALLOWING NEGATIVE NODES IN DEFORMATION******************************** **************** pass 1 of 1 ************************ enabling zero nodes setting smoothness coefficient to 0.008 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.514, neg=0, invalid=762 0294: dt=32.368000, rms=0.514 (0.182%), neg=0, invalid=762 0295: dt=4.624000, rms=0.514 (0.002%), neg=0, invalid=762 0296: dt=4.624000, rms=0.514 (-0.000%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.514, neg=0, invalid=762 0297: dt=129.472000, rms=0.513 (0.209%), neg=0, invalid=762 0298: dt=129.472000, rms=0.513 (0.021%), neg=0, invalid=762 0299: dt=129.472000, rms=0.513 (0.007%), neg=0, invalid=762 0300: dt=129.472000, rms=0.513 (0.029%), neg=0, invalid=762 0301: dt=129.472000, rms=0.513 (0.038%), neg=0, invalid=762 0302: dt=129.472000, rms=0.513 (0.028%), neg=0, invalid=762 0303: dt=129.472000, rms=0.513 (0.016%), neg=0, invalid=762 setting smoothness coefficient to 0.031 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.514, neg=0, invalid=762 0304: dt=36.288000, rms=0.512 (0.251%), neg=0, invalid=762 0305: dt=36.288000, rms=0.512 (0.036%), neg=0, invalid=762 0306: dt=36.288000, rms=0.512 (0.034%), neg=0, invalid=762 0307: dt=36.288000, rms=0.512 (0.034%), neg=0, invalid=762 0308: dt=36.288000, rms=0.512 (0.005%), neg=0, invalid=762 0309: dt=414.720000, rms=0.510 (0.281%), neg=0, invalid=762 0310: dt=20.736000, rms=0.510 (0.005%), neg=0, invalid=762 0311: dt=20.736000, rms=0.510 (0.004%), neg=0, invalid=762 0312: dt=20.736000, rms=0.510 (-0.010%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.511, neg=0, invalid=762 0313: dt=90.874459, rms=0.509 (0.531%), neg=0, invalid=762 0314: dt=36.288000, rms=0.508 (0.140%), neg=0, invalid=762 0315: dt=36.288000, rms=0.507 (0.071%), neg=0, invalid=762 0316: dt=36.288000, rms=0.507 (0.108%), neg=0, invalid=762 0317: dt=36.288000, rms=0.506 (0.120%), neg=0, invalid=762 0318: dt=36.288000, rms=0.506 (0.108%), neg=0, invalid=762 0319: dt=36.288000, rms=0.505 (0.085%), neg=0, invalid=762 0320: dt=414.720000, rms=0.505 (0.095%), neg=0, invalid=762 0321: dt=36.288000, rms=0.504 (0.066%), neg=0, invalid=762 setting smoothness coefficient to 0.118 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.506, neg=0, invalid=762 iter 0, gcam->neg = 3 after 3 iterations, nbhd size=0, neg = 0 0322: dt=44.800000, rms=0.501 (0.979%), neg=0, invalid=762 iter 0, gcam->neg = 7 after 3 iterations, nbhd size=0, neg = 0 0323: dt=63.565611, rms=0.495 (1.206%), neg=0, invalid=762 0324: dt=11.200000, rms=0.493 (0.367%), neg=0, invalid=762 0325: dt=23.809524, rms=0.492 (0.143%), neg=0, invalid=762 0326: dt=23.809524, rms=0.491 (0.279%), neg=0, invalid=762 iter 0, gcam->neg = 8 after 2 iterations, nbhd size=0, neg = 0 0327: dt=23.809524, rms=0.489 (0.406%), neg=0, invalid=762 iter 0, gcam->neg = 3 after 1 iterations, nbhd size=0, neg = 0 0328: dt=23.809524, rms=0.487 (0.459%), neg=0, invalid=762 iter 0, gcam->neg = 8 after 4 iterations, nbhd size=0, neg = 0 0329: dt=23.809524, rms=0.485 (0.441%), neg=0, invalid=762 iter 0, gcam->neg = 19 after 5 iterations, nbhd size=0, neg = 0 0330: dt=23.809524, rms=0.482 (0.439%), neg=0, invalid=762 iter 0, gcam->neg = 26 after 11 iterations, nbhd size=1, neg = 0 0331: dt=23.809524, rms=0.481 (0.394%), neg=0, invalid=762 iter 0, gcam->neg = 26 after 12 iterations, nbhd size=1, neg = 0 0332: dt=23.809524, rms=0.479 (0.332%), neg=0, invalid=762 iter 0, gcam->neg = 15 after 5 iterations, nbhd size=0, neg = 0 0333: dt=23.809524, rms=0.478 (0.264%), neg=0, invalid=762 iter 0, gcam->neg = 23 after 6 iterations, nbhd size=0, neg = 0 0334: dt=23.809524, rms=0.477 (0.207%), neg=0, invalid=762 iter 0, gcam->neg = 12 after 12 iterations, nbhd size=1, neg = 0 0335: dt=23.809524, rms=0.476 (0.198%), neg=0, invalid=762 iter 0, gcam->neg = 9 after 2 iterations, nbhd size=0, neg = 0 0336: dt=23.809524, rms=0.475 (0.205%), neg=0, invalid=762 iter 0, gcam->neg = 11 after 6 iterations, nbhd size=0, neg = 0 0337: dt=23.809524, rms=0.474 (0.183%), neg=0, invalid=762 iter 0, gcam->neg = 16 after 10 iterations, nbhd size=1, neg = 0 0338: dt=23.809524, rms=0.473 (0.141%), neg=0, invalid=762 iter 0, gcam->neg = 18 after 11 iterations, nbhd size=1, neg = 0 0339: dt=23.809524, rms=0.473 (0.122%), neg=0, invalid=762 iter 0, gcam->neg = 11 after 5 iterations, nbhd size=0, neg = 0 0340: dt=23.809524, rms=0.472 (0.121%), neg=0, invalid=762 iter 0, gcam->neg = 11 after 2 iterations, nbhd size=0, neg = 0 0341: dt=76.800000, rms=0.471 (0.135%), neg=0, invalid=762 iter 0, gcam->neg = 1 after 4 iterations, nbhd size=0, neg = 0 0342: dt=25.600000, rms=0.471 (0.031%), neg=0, invalid=762 0343: dt=25.600000, rms=0.471 (0.035%), neg=0, invalid=762 0344: dt=25.600000, rms=0.471 (0.032%), neg=0, invalid=762 iter 0, gcam->neg = 1 after 1 iterations, nbhd size=0, neg = 0 0345: dt=25.600000, rms=0.471 (0.023%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.472, neg=0, invalid=762 iter 0, gcam->neg = 2 after 1 iterations, nbhd size=0, neg = 0 0346: dt=38.400000, rms=0.468 (0.752%), neg=0, invalid=762 iter 0, gcam->neg = 1 after 1 iterations, nbhd size=0, neg = 0 0347: dt=32.000000, rms=0.467 (0.228%), neg=0, invalid=762 0348: dt=32.000000, rms=0.467 (0.143%), neg=0, invalid=762 0349: dt=32.000000, rms=0.466 (0.232%), neg=0, invalid=762 iter 0, gcam->neg = 1 after 0 iterations, nbhd size=0, neg = 0 0350: dt=32.000000, rms=0.465 (0.150%), neg=0, invalid=762 iter 0, gcam->neg = 3 after 1 iterations, nbhd size=0, neg = 0 0351: dt=32.000000, rms=0.464 (0.149%), neg=0, invalid=762 iter 0, gcam->neg = 4 after 4 iterations, nbhd size=0, neg = 0 0352: dt=32.000000, rms=0.464 (0.022%), neg=0, invalid=762 iter 0, gcam->neg = 2 after 1 iterations, nbhd size=0, neg = 0 0353: dt=32.000000, rms=0.464 (0.064%), neg=0, invalid=762 iter 0, gcam->neg = 3 after 3 iterations, nbhd size=0, neg = 0 0354: dt=32.000000, rms=0.464 (-0.041%), neg=0, invalid=762 0355: dt=25.600000, rms=0.464 (0.041%), neg=0, invalid=762 0356: dt=44.800000, rms=0.463 (0.060%), neg=0, invalid=762 0357: dt=19.200000, rms=0.463 (0.020%), neg=0, invalid=762 setting smoothness coefficient to 0.400 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.473, neg=0, invalid=762 0358: dt=0.000000, rms=0.472 (0.230%), neg=0, invalid=762 0359: dt=0.000000, rms=0.472 (0.000%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.473, neg=0, invalid=762 0360: dt=0.000000, rms=0.472 (0.230%), neg=0, invalid=762 0361: dt=0.000000, rms=0.472 (0.000%), neg=0, invalid=762 setting smoothness coefficient to 1.000 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.491, neg=0, invalid=762 iter 0, gcam->neg = 1 after 0 iterations, nbhd size=0, neg = 0 0362: dt=1.024000, rms=0.489 (0.559%), neg=0, invalid=762 0363: dt=0.384000, rms=0.489 (0.020%), neg=0, invalid=762 0364: dt=0.384000, rms=0.489 (-0.014%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.490, neg=0, invalid=762 iter 0, gcam->neg = 1 after 0 iterations, nbhd size=0, neg = 0 0365: dt=1.024000, rms=0.488 (0.365%), neg=0, invalid=762 0366: dt=0.384000, rms=0.488 (0.010%), neg=0, invalid=762 0367: dt=0.384000, rms=0.488 (-0.006%), neg=0, invalid=762 resetting metric properties... setting smoothness coefficient to 2.000 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.472, neg=0, invalid=762 iter 0, gcam->neg = 988 after 15 iterations, nbhd size=1, neg = 0 0368: dt=2.286035, rms=0.439 (7.078%), neg=0, invalid=762 0369: dt=0.096000, rms=0.439 (0.081%), neg=0, invalid=762 0370: dt=0.096000, rms=0.439 (-0.067%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.440, neg=0, invalid=762 0371: dt=0.080000, rms=0.438 (0.309%), neg=0, invalid=762 0372: dt=0.005000, rms=0.438 (0.005%), neg=0, invalid=762 0373: dt=0.005000, rms=0.438 (-0.000%), neg=0, invalid=762 label assignment complete, 0 changed (0.00%) label assignment complete, 0 changed (0.00%) ***************** morphing with label term set to 0 ******************************* **************** pass 1 of 1 ************************ enabling zero nodes setting smoothness coefficient to 0.008 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.423, neg=0, invalid=762 0374: dt=0.000000, rms=0.423 (0.000%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.423, neg=0, invalid=762 0375: dt=73.984000, rms=0.423 (0.011%), neg=0, invalid=762 0376: dt=92.480000, rms=0.423 (0.003%), neg=0, invalid=762 0377: dt=92.480000, rms=0.423 (0.000%), neg=0, invalid=762 0378: dt=92.480000, rms=0.423 (-0.001%), neg=0, invalid=762 setting smoothness coefficient to 0.031 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.423, neg=0, invalid=762 0379: dt=0.000000, rms=0.423 (0.000%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.423, neg=0, invalid=762 0380: dt=145.152000, rms=0.423 (0.102%), neg=0, invalid=762 0381: dt=103.680000, rms=0.423 (0.064%), neg=0, invalid=762 0382: dt=103.680000, rms=0.423 (0.009%), neg=0, invalid=762 0383: dt=103.680000, rms=0.422 (0.073%), neg=0, invalid=762 0384: dt=103.680000, rms=0.422 (0.046%), neg=0, invalid=762 0385: dt=103.680000, rms=0.422 (0.042%), neg=0, invalid=762 setting smoothness coefficient to 0.118 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.423, neg=0, invalid=762 0386: dt=11.200000, rms=0.422 (0.110%), neg=0, invalid=762 0387: dt=11.200000, rms=0.422 (0.048%), neg=0, invalid=762 0388: dt=11.200000, rms=0.422 (0.035%), neg=0, invalid=762 iter 0, gcam->neg = 2 after 1 iterations, nbhd size=0, neg = 0 0389: dt=11.200000, rms=0.422 (0.013%), neg=0, invalid=762 iter 0, gcam->neg = 2 after 1 iterations, nbhd size=0, neg = 0 0390: dt=11.200000, rms=0.422 (-0.034%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.422, neg=0, invalid=762 0391: dt=35.747748, rms=0.419 (0.653%), neg=0, invalid=762 0392: dt=30.157068, rms=0.418 (0.290%), neg=0, invalid=762 iter 0, gcam->neg = 1 after 0 iterations, nbhd size=0, neg = 0 0393: dt=32.000000, rms=0.417 (0.203%), neg=0, invalid=762 0394: dt=32.000000, rms=0.416 (0.162%), neg=0, invalid=762 iter 0, gcam->neg = 5 after 9 iterations, nbhd size=1, neg = 0 0395: dt=32.000000, rms=0.415 (0.249%), neg=0, invalid=762 iter 0, gcam->neg = 4 after 4 iterations, nbhd size=0, neg = 0 0396: dt=32.000000, rms=0.414 (0.276%), neg=0, invalid=762 iter 0, gcam->neg = 1 after 0 iterations, nbhd size=0, neg = 0 0397: dt=32.000000, rms=0.413 (0.305%), neg=0, invalid=762 iter 0, gcam->neg = 10 after 12 iterations, nbhd size=1, neg = 0 0398: dt=32.000000, rms=0.412 (0.220%), neg=0, invalid=762 iter 0, gcam->neg = 12 after 7 iterations, nbhd size=0, neg = 0 0399: dt=32.000000, rms=0.411 (0.224%), neg=0, invalid=762 iter 0, gcam->neg = 11 after 12 iterations, nbhd size=1, neg = 0 0400: dt=32.000000, rms=0.411 (0.144%), neg=0, invalid=762 iter 0, gcam->neg = 23 after 10 iterations, nbhd size=0, neg = 0 0401: dt=32.000000, rms=0.410 (0.168%), neg=0, invalid=762 iter 0, gcam->neg = 28 after 6 iterations, nbhd size=0, neg = 0 0402: dt=32.000000, rms=0.409 (0.111%), neg=0, invalid=762 iter 0, gcam->neg = 19 after 3 iterations, nbhd size=0, neg = 0 0403: dt=32.000000, rms=0.409 (0.120%), neg=0, invalid=762 iter 0, gcam->neg = 27 after 22 iterations, nbhd size=1, neg = 0 0404: dt=32.000000, rms=0.409 (-0.027%), neg=0, invalid=762 0405: dt=25.600000, rms=0.409 (0.027%), neg=0, invalid=762 iter 0, gcam->neg = 3 after 1 iterations, nbhd size=0, neg = 0 0406: dt=38.400000, rms=0.409 (0.018%), neg=0, invalid=762 setting smoothness coefficient to 0.400 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.414, neg=0, invalid=762 0407: dt=0.252000, rms=0.414 (0.001%), neg=0, invalid=762 0408: dt=0.216000, rms=0.414 (0.000%), neg=0, invalid=762 0409: dt=0.216000, rms=0.414 (-0.000%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.414, neg=0, invalid=762 0410: dt=3.428571, rms=0.414 (0.034%), neg=0, invalid=762 iter 0, gcam->neg = 1 after 1 iterations, nbhd size=0, neg = 0 0411: dt=1.728000, rms=0.414 (0.007%), neg=0, invalid=762 0412: dt=1.728000, rms=0.414 (0.002%), neg=0, invalid=762 0413: dt=1.728000, rms=0.414 (-0.016%), neg=0, invalid=762 setting smoothness coefficient to 1.000 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.424, neg=0, invalid=762 0414: dt=0.000000, rms=0.424 (0.000%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.424, neg=0, invalid=762 0415: dt=0.000000, rms=0.424 (0.000%), neg=0, invalid=762 resetting metric properties... setting smoothness coefficient to 2.000 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.407, neg=0, invalid=762 iter 0, gcam->neg = 755 after 19 iterations, nbhd size=1, neg = 0 0416: dt=1.086819, rms=0.399 (2.091%), neg=0, invalid=762 0417: dt=0.000023, rms=0.399 (0.000%), neg=0, invalid=762 0418: dt=0.000023, rms=0.399 (-0.000%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.399, neg=0, invalid=762 0419: dt=0.112000, rms=0.399 (0.088%), neg=0, invalid=762 0420: dt=0.112000, rms=0.398 (0.052%), neg=0, invalid=762 0421: dt=0.112000, rms=0.398 (0.049%), neg=0, invalid=762 0422: dt=0.112000, rms=0.398 (0.042%), neg=0, invalid=762 0423: dt=0.112000, rms=0.398 (-0.010%), neg=0, invalid=762 writing output transformation to transforms/talairach.m3z... GCAMwrite mri_ca_register took 1 hours, 55 minutes and 5 seconds. mri_ca_register utimesec 6899.908132 mri_ca_register stimesec 4.879915 mri_ca_register ru_maxrss 1339608 mri_ca_register ru_ixrss 0 mri_ca_register ru_idrss 0 mri_ca_register ru_isrss 0 mri_ca_register ru_minflt 4308140 mri_ca_register ru_majflt 0 mri_ca_register ru_nswap 0 mri_ca_register ru_inblock 0 mri_ca_register ru_oublock 63472 mri_ca_register ru_msgsnd 0 mri_ca_register ru_msgrcv 0 mri_ca_register ru_nsignals 0 mri_ca_register ru_nvcsw 1 mri_ca_register ru_nivcsw 9210 FSRUNTIME@ mri_ca_register 1.9180 hours 1 threads #-------------------------------------- #@# SubCort Seg Thu 17 Nov 2022 04:09:23 AM CST mri_ca_label -relabel_unlikely 9 .3 -prior 0.5 -align norm.mgz transforms/talairach.m3z /opt/freesurfer/average/RB_all_2016-05-10.vc700.gca aseg.auto_noCCseg.mgz sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/mri mri_ca_label -relabel_unlikely 9 .3 -prior 0.5 -align norm.mgz transforms/talairach.m3z /opt/freesurfer/average/RB_all_2016-05-10.vc700.gca aseg.auto_noCCseg.mgz == Number of threads available to mri_ca_label for OpenMP = 1 == relabeling unlikely voxels with window_size = 9 and prior threshold 0.30 using Gibbs prior factor = 0.500 renormalizing sequences with structure alignment, equivalent to: -renormalize -renormalize_mean 0.500 -regularize 0.500 reading 1 input volumes reading classifier array from /opt/freesurfer/average/RB_all_2016-05-10.vc700.gca reading input volume from norm.mgz average std[0] = 7.3 reading transform from transforms/talairach.m3z setting orig areas to linear transform determinant scaled 6.13 Atlas used for the 3D morph was /opt/freesurfer/average/RB_all_2016-05-10.vc700.gca average std = 7.3 using min determinant for regularization = 5.3 0 singular and 0 ill-conditioned covariance matrices regularized labeling volume... renormalizing by structure alignment.... renormalizing input #0 gca peak = 0.16259 (20) mri peak = 0.16889 ( 9) Left_Lateral_Ventricle (4): linear fit = 0.38 x + 0.0 (602 voxels, overlap=0.005) Left_Lateral_Ventricle (4): linear fit = 0.40 x + 0.0 (602 voxels, peak = 8), gca=8.0 gca peak = 0.17677 (13) mri peak = 0.20670 ( 8) Right_Lateral_Ventricle (43): linear fit = 0.47 x + 0.0 (324 voxels, overlap=0.007) Right_Lateral_Ventricle (43): linear fit = 0.47 x + 0.0 (324 voxels, peak = 6), gca=6.0 gca peak = 0.28129 (95) mri peak = 0.09945 (91) Right_Pallidum (52): linear fit = 0.93 x + 0.0 (724 voxels, overlap=0.079) Right_Pallidum (52): linear fit = 0.93 x + 0.0 (724 voxels, peak = 88), gca=87.9 gca peak = 0.16930 (96) mri peak = 0.09941 (85) Left_Pallidum (13): linear fit = 0.93 x + 0.0 (673 voxels, overlap=0.532) Left_Pallidum (13): linear fit = 0.93 x + 0.0 (673 voxels, peak = 89), gca=88.8 gca peak = 0.24553 (55) mri peak = 0.10684 (61) Right_Hippocampus (53): linear fit = 1.04 x + 0.0 (985 voxels, overlap=1.006) Right_Hippocampus (53): linear fit = 1.04 x + 0.0 (985 voxels, peak = 57), gca=57.5 gca peak = 0.30264 (59) mri peak = 0.12202 (59) Left_Hippocampus (17): linear fit = 1.02 x + 0.0 (996 voxels, overlap=1.006) Left_Hippocampus (17): linear fit = 1.02 x + 0.0 (996 voxels, peak = 60), gca=60.5 gca peak = 0.07580 (103) mri peak = 0.11919 (105) Right_Cerebral_White_Matter (41): linear fit = 1.01 x + 0.0 (26598 voxels, overlap=0.597) Right_Cerebral_White_Matter (41): linear fit = 1.01 x + 0.0 (26598 voxels, peak = 105), gca=104.5 gca peak = 0.07714 (104) mri peak = 0.12157 (105) Left_Cerebral_White_Matter (2): linear fit = 1.01 x + 0.0 (22154 voxels, overlap=0.566) Left_Cerebral_White_Matter (2): linear fit = 1.01 x + 0.0 (22154 voxels, peak = 106), gca=105.6 gca peak = 0.09712 (58) mri peak = 0.06333 (58) Left_Cerebral_Cortex (3): linear fit = 0.99 x + 0.0 (41919 voxels, overlap=0.967) Left_Cerebral_Cortex (3): linear fit = 0.99 x + 0.0 (41919 voxels, peak = 57), gca=57.1 gca peak = 0.11620 (58) mri peak = 0.06179 (56) Right_Cerebral_Cortex (42): linear fit = 0.96 x + 0.0 (42156 voxels, overlap=0.953) Right_Cerebral_Cortex (42): linear fit = 0.96 x + 0.0 (42156 voxels, peak = 56), gca=56.0 gca peak = 0.30970 (66) mri peak = 0.16117 (71) Right_Caudate (50): linear fit = 1.04 x + 0.0 (952 voxels, overlap=1.002) Right_Caudate (50): linear fit = 1.04 x + 0.0 (952 voxels, peak = 69), gca=69.0 gca peak = 0.15280 (69) mri peak = 0.13457 (71) Left_Caudate (11): linear fit = 0.96 x + 0.0 (1134 voxels, overlap=0.700) Left_Caudate (11): linear fit = 0.96 x + 0.0 (1134 voxels, peak = 67), gca=66.6 gca peak = 0.13902 (56) mri peak = 0.05461 (59) Left_Cerebellum_Cortex (8): linear fit = 1.07 x + 0.0 (25283 voxels, overlap=0.978) Left_Cerebellum_Cortex (8): linear fit = 1.07 x + 0.0 (25283 voxels, peak = 60), gca=59.6 gca peak = 0.14777 (55) mri peak = 0.05889 (63) Right_Cerebellum_Cortex (47): linear fit = 1.07 x + 0.0 (26693 voxels, overlap=0.971) Right_Cerebellum_Cortex (47): linear fit = 1.07 x + 0.0 (26693 voxels, peak = 59), gca=58.6 gca peak = 0.16765 (84) mri peak = 0.11198 (91) Left_Cerebellum_White_Matter (7): linear fit = 1.07 x + 0.0 (4867 voxels, overlap=0.729) Left_Cerebellum_White_Matter (7): linear fit = 1.07 x + 0.0 (4867 voxels, peak = 89), gca=89.5 gca peak = 0.18739 (84) mri peak = 0.12855 (89) Right_Cerebellum_White_Matter (46): linear fit = 1.07 x + 0.0 (4971 voxels, overlap=0.556) Right_Cerebellum_White_Matter (46): linear fit = 1.07 x + 0.0 (4971 voxels, peak = 89), gca=89.5 gca peak = 0.29869 (57) mri peak = 0.13180 (56) Left_Amygdala (18): linear fit = 0.98 x + 0.0 (484 voxels, overlap=1.020) Left_Amygdala (18): linear fit = 0.98 x + 0.0 (484 voxels, peak = 56), gca=55.6 gca peak = 0.33601 (57) mri peak = 0.13333 (59) Right_Amygdala (54): linear fit = 1.04 x + 0.0 (625 voxels, overlap=1.010) Right_Amygdala (54): linear fit = 1.04 x + 0.0 (625 voxels, peak = 60), gca=59.6 gca peak = 0.11131 (90) mri peak = 0.08192 (82) Left_Thalamus_Proper (10): linear fit = 0.95 x + 0.0 (4186 voxels, overlap=0.804) Left_Thalamus_Proper (10): linear fit = 0.95 x + 0.0 (4186 voxels, peak = 86), gca=85.9 gca peak = 0.11793 (83) mri peak = 0.07631 (79) Right_Thalamus_Proper (49): linear fit = 1.00 x + 0.0 (3888 voxels, overlap=0.978) Right_Thalamus_Proper (49): linear fit = 1.00 x + 0.0 (3888 voxels, peak = 83), gca=83.0 gca peak = 0.08324 (81) mri peak = 0.10955 (75) Left_Putamen (12): linear fit = 0.95 x + 0.0 (2231 voxels, overlap=0.696) Left_Putamen (12): linear fit = 0.95 x + 0.0 (2231 voxels, peak = 77), gca=77.4 gca peak = 0.10360 (77) mri peak = 0.10869 (77) Right_Putamen (51): linear fit = 0.95 x + 0.0 (2464 voxels, overlap=0.817) Right_Putamen (51): linear fit = 0.95 x + 0.0 (2464 voxels, peak = 74), gca=73.5 gca peak = 0.08424 (78) mri peak = 0.08598 (84) Brain_Stem (16): linear fit = 1.07 x + 0.0 (9107 voxels, overlap=0.476) Brain_Stem (16): linear fit = 1.07 x + 0.0 (9107 voxels, peak = 83), gca=83.1 gca peak = 0.12631 (89) mri peak = 0.07397 (90) Right_VentralDC (60): linear fit = 1.03 x + 0.0 (1342 voxels, overlap=0.824) Right_VentralDC (60): linear fit = 1.03 x + 0.0 (1342 voxels, peak = 92), gca=92.1 gca peak = 0.14500 (87) mri peak = 0.08590 (92) Left_VentralDC (28): linear fit = 1.03 x + 0.0 (1387 voxels, overlap=0.916) Left_VentralDC (28): linear fit = 1.03 x + 0.0 (1387 voxels, peak = 90), gca=90.0 gca peak = 0.14975 (24) mri peak = 0.14925 ( 9) Third_Ventricle (14): linear fit = 0.38 x + 0.0 (67 voxels, overlap=0.048) Third_Ventricle (14): linear fit = 0.38 x + 0.0 (67 voxels, peak = 9), gca=9.0 gca peak = 0.19357 (14) mri peak = 0.17129 (12) Fourth_Ventricle (15): linear fit = 0.63 x + 0.0 (108 voxels, overlap=0.247) Fourth_Ventricle (15): linear fit = 0.63 x + 0.0 (108 voxels, peak = 9), gca=8.9 gca peak Unknown = 0.94835 ( 0) gca peak Left_Inf_Lat_Vent = 0.16825 (27) gca peak Left_Thalamus = 1.00000 (94) gca peak Third_Ventricle = 0.14975 (24) gca peak Fourth_Ventricle = 0.19357 (14) gca peak CSF = 0.23379 (36) gca peak Left_Accumbens_area = 0.70037 (62) gca peak Left_undetermined = 1.00000 (26) gca peak Left_vessel = 0.75997 (52) gca peak Left_choroid_plexus = 0.12089 (35) gca peak Right_Inf_Lat_Vent = 0.24655 (23) gca peak Right_Accumbens_area = 0.45042 (65) gca peak Right_vessel = 0.82168 (52) gca peak Right_choroid_plexus = 0.14516 (37) gca peak Fifth_Ventricle = 0.65475 (32) gca peak WM_hypointensities = 0.07854 (76) gca peak non_WM_hypointensities = 0.08491 (43) gca peak Optic_Chiasm = 0.71127 (75) not using caudate to estimate GM means estimating mean gm scale to be 1.01 x + 0.0 estimating mean wm scale to be 1.01 x + 0.0 estimating mean csf scale to be 0.43 x + 0.0 saving intensity scales to aseg.auto_noCCseg.label_intensities.txt renormalizing by structure alignment.... renormalizing input #0 gca peak = 0.30836 ( 7) mri peak = 0.16889 ( 9) Left_Lateral_Ventricle (4): linear fit = 1.05 x + 0.0 (602 voxels, overlap=0.969) Left_Lateral_Ventricle (4): linear fit = 1.05 x + 0.0 (602 voxels, peak = 7), gca=7.4 gca peak = 0.33567 ( 6) mri peak = 0.20670 ( 8) Right_Lateral_Ventricle (43): linear fit = 1.09 x + 0.0 (324 voxels, overlap=0.824) Right_Lateral_Ventricle (43): linear fit = 1.09 x + 0.0 (324 voxels, peak = 7), gca=6.5 gca peak = 0.24340 (87) mri peak = 0.09945 (91) Right_Pallidum (52): linear fit = 0.99 x + 0.0 (724 voxels, overlap=1.011) Right_Pallidum (52): linear fit = 0.99 x + 0.0 (724 voxels, peak = 86), gca=85.7 gca peak = 0.19207 (89) mri peak = 0.09941 (85) Left_Pallidum (13): linear fit = 0.99 x + 0.0 (673 voxels, overlap=1.006) Left_Pallidum (13): linear fit = 0.99 x + 0.0 (673 voxels, peak = 88), gca=87.7 gca peak = 0.29356 (58) mri peak = 0.10684 (61) Right_Hippocampus (53): linear fit = 1.01 x + 0.0 (985 voxels, overlap=1.003) Right_Hippocampus (53): linear fit = 1.01 x + 0.0 (985 voxels, peak = 59), gca=58.9 gca peak = 0.26211 (58) mri peak = 0.12202 (59) Left_Hippocampus (17): linear fit = 0.99 x + 0.0 (996 voxels, overlap=1.004) Left_Hippocampus (17): linear fit = 0.99 x + 0.0 (996 voxels, peak = 57), gca=57.1 gca peak = 0.07771 (104) mri peak = 0.11919 (105) Right_Cerebral_White_Matter (41): linear fit = 1.00 x + 0.0 (26598 voxels, overlap=0.666) Right_Cerebral_White_Matter (41): linear fit = 1.00 x + 0.0 (26598 voxels, peak = 104), gca=104.0 gca peak = 0.07820 (106) mri peak = 0.12157 (105) Left_Cerebral_White_Matter (2): linear fit = 1.00 x + 0.0 (22154 voxels, overlap=0.634) Left_Cerebral_White_Matter (2): linear fit = 1.00 x + 0.0 (22154 voxels, peak = 106), gca=106.0 gca peak = 0.09869 (57) mri peak = 0.06333 (58) Left_Cerebral_Cortex (3): linear fit = 1.00 x + 0.0 (41919 voxels, overlap=0.975) Left_Cerebral_Cortex (3): linear fit = 1.00 x + 0.0 (41919 voxels, peak = 57), gca=57.0 gca peak = 0.11969 (56) mri peak = 0.06179 (56) Right_Cerebral_Cortex (42): linear fit = 1.00 x + 0.0 (42156 voxels, overlap=0.970) Right_Cerebral_Cortex (42): linear fit = 1.00 x + 0.0 (42156 voxels, peak = 56), gca=56.0 gca peak = 0.28666 (69) mri peak = 0.16117 (71) Right_Caudate (50): linear fit = 1.00 x + 0.0 (952 voxels, overlap=1.001) Right_Caudate (50): linear fit = 1.00 x + 0.0 (952 voxels, peak = 69), gca=69.0 gca peak = 0.14375 (75) mri peak = 0.13457 (71) Left_Caudate (11): linear fit = 0.98 x + 0.0 (1134 voxels, overlap=0.994) Left_Caudate (11): linear fit = 0.98 x + 0.0 (1134 voxels, peak = 73), gca=73.1 gca peak = 0.13243 (59) mri peak = 0.05461 (59) Left_Cerebellum_Cortex (8): linear fit = 1.02 x + 0.0 (25283 voxels, overlap=1.000) Left_Cerebellum_Cortex (8): linear fit = 1.02 x + 0.0 (25283 voxels, peak = 60), gca=60.5 gca peak = 0.13842 (58) mri peak = 0.05889 (63) Right_Cerebellum_Cortex (47): linear fit = 1.02 x + 0.0 (26693 voxels, overlap=0.996) Right_Cerebellum_Cortex (47): linear fit = 1.02 x + 0.0 (26693 voxels, peak = 59), gca=59.4 gca peak = 0.15873 (90) mri peak = 0.11198 (91) Left_Cerebellum_White_Matter (7): linear fit = 1.00 x + 0.0 (4867 voxels, overlap=0.958) Left_Cerebellum_White_Matter (7): linear fit = 1.00 x + 0.0 (4867 voxels, peak = 90), gca=89.6 gca peak = 0.15153 (90) mri peak = 0.12855 (89) Right_Cerebellum_White_Matter (46): linear fit = 0.99 x + 0.0 (4971 voxels, overlap=0.909) Right_Cerebellum_White_Matter (46): linear fit = 0.99 x + 0.0 (4971 voxels, peak = 89), gca=88.7 gca peak = 0.38889 (57) mri peak = 0.13180 (56) Left_Amygdala (18): linear fit = 1.00 x + 0.0 (484 voxels, overlap=1.023) Left_Amygdala (18): linear fit = 1.00 x + 0.0 (484 voxels, peak = 57), gca=57.0 gca peak = 0.30201 (60) mri peak = 0.13333 (59) Right_Amygdala (54): linear fit = 1.00 x + 0.0 (625 voxels, overlap=1.004) Right_Amygdala (54): linear fit = 1.00 x + 0.0 (625 voxels, peak = 60), gca=60.0 gca peak = 0.11793 (86) mri peak = 0.08192 (82) Left_Thalamus_Proper (10): linear fit = 1.01 x + 0.0 (4186 voxels, overlap=0.956) Left_Thalamus_Proper (10): linear fit = 1.01 x + 0.0 (4186 voxels, peak = 87), gca=87.3 gca peak = 0.12353 (83) mri peak = 0.07631 (79) Right_Thalamus_Proper (49): linear fit = 1.00 x + 0.0 (3888 voxels, overlap=0.978) Right_Thalamus_Proper (49): linear fit = 1.00 x + 0.0 (3888 voxels, peak = 83), gca=83.0 gca peak = 0.08013 (79) mri peak = 0.10955 (75) Left_Putamen (12): linear fit = 1.00 x + 0.0 (2231 voxels, overlap=0.834) Left_Putamen (12): linear fit = 1.00 x + 0.0 (2231 voxels, peak = 79), gca=79.0 gca peak = 0.11277 (72) mri peak = 0.10869 (77) Right_Putamen (51): linear fit = 1.01 x + 0.0 (2464 voxels, overlap=0.832) Right_Putamen (51): linear fit = 1.01 x + 0.0 (2464 voxels, peak = 73), gca=73.1 gca peak = 0.07338 (83) mri peak = 0.08598 (84) Brain_Stem (16): linear fit = 1.02 x + 0.0 (9107 voxels, overlap=0.728) Brain_Stem (16): linear fit = 1.02 x + 0.0 (9107 voxels, peak = 85), gca=85.1 gca peak = 0.12306 (92) mri peak = 0.07397 (90) Right_VentralDC (60): linear fit = 1.00 x + 0.0 (1342 voxels, overlap=0.869) Right_VentralDC (60): linear fit = 1.00 x + 0.0 (1342 voxels, peak = 92), gca=91.5 gca peak = 0.15231 (88) mri peak = 0.08590 (92) Left_VentralDC (28): linear fit = 1.00 x + 0.0 (1387 voxels, overlap=0.952) Left_VentralDC (28): linear fit = 1.00 x + 0.0 (1387 voxels, peak = 88), gca=87.6 gca peak = 0.29982 (11) mri peak = 0.14925 ( 9) Third_Ventricle (14): linear fit = 1.04 x + 0.0 (67 voxels, overlap=0.999) Third_Ventricle (14): linear fit = 1.04 x + 0.0 (67 voxels, peak = 11), gca=11.5 gca peak = 0.31722 ( 6) mri peak = 0.17129 (12) Fourth_Ventricle (15): linear fit = 1.61 x + 0.0 (108 voxels, overlap=0.640) Fourth_Ventricle (15): linear fit = 1.61 x + 0.0 (108 voxels, peak = 10), gca=9.6 gca peak Unknown = 0.94835 ( 0) gca peak Left_Inf_Lat_Vent = 0.15047 (33) gca peak Left_Thalamus = 0.72551 (95) gca peak Fourth_Ventricle = 0.31722 ( 6) gca peak CSF = 0.27323 (16) gca peak Left_Accumbens_area = 0.81147 (60) gca peak Left_undetermined = 1.00000 (26) gca peak Left_vessel = 0.75997 (52) gca peak Left_choroid_plexus = 0.12089 (35) gca peak Right_Inf_Lat_Vent = 0.22564 (24) gca peak Right_Accumbens_area = 0.33257 (68) gca peak Right_vessel = 0.82168 (52) gca peak Right_choroid_plexus = 0.14516 (37) gca peak Fifth_Ventricle = 0.68040 (14) gca peak WM_hypointensities = 0.07241 (78) gca peak non_WM_hypointensities = 0.09744 (44) gca peak Optic_Chiasm = 0.70931 (75) not using caudate to estimate GM means estimating mean gm scale to be 1.00 x + 0.0 estimating mean wm scale to be 1.00 x + 0.0 estimating mean csf scale to be 1.06 x + 0.0 saving intensity scales to aseg.auto_noCCseg.label_intensities.txt saving sequentially combined intensity scales to aseg.auto_noCCseg.label_intensities.txt 54739 voxels changed in iteration 0 of unlikely voxel relabeling 72 voxels changed in iteration 1 of unlikely voxel relabeling 2 voxels changed in iteration 2 of unlikely voxel relabeling 0 voxels changed in iteration 3 of unlikely voxel relabeling 27755 gm and wm labels changed (%28 to gray, %72 to white out of all changed labels) 372 hippocampal voxels changed. 0 amygdala voxels changed. pass 1: 59205 changed. image ll: -2.075, PF=0.500 pass 2: 16022 changed. image ll: -2.074, PF=0.500 pass 3: 5090 changed. pass 4: 1851 changed. 30560 voxels changed in iteration 0 of unlikely voxel relabeling 122 voxels changed in iteration 1 of unlikely voxel relabeling 7 voxels changed in iteration 2 of unlikely voxel relabeling 0 voxels changed in iteration 3 of unlikely voxel relabeling 4872 voxels changed in iteration 0 of unlikely voxel relabeling 128 voxels changed in iteration 1 of unlikely voxel relabeling 0 voxels changed in iteration 2 of unlikely voxel relabeling 5537 voxels changed in iteration 0 of unlikely voxel relabeling 54 voxels changed in iteration 1 of unlikely voxel relabeling 1 voxels changed in iteration 2 of unlikely voxel relabeling 0 voxels changed in iteration 3 of unlikely voxel relabeling 4465 voxels changed in iteration 0 of unlikely voxel relabeling 34 voxels changed in iteration 1 of unlikely voxel relabeling 1 voxels changed in iteration 2 of unlikely voxel relabeling 0 voxels changed in iteration 3 of unlikely voxel relabeling MRItoUCHAR: min=0, max=85 MRItoUCHAR: converting to UCHAR writing labeled volume to aseg.auto_noCCseg.mgz mri_ca_label utimesec 1873.415326 mri_ca_label stimesec 0.887959 mri_ca_label ru_maxrss 2114872 mri_ca_label ru_ixrss 0 mri_ca_label ru_idrss 0 mri_ca_label ru_isrss 0 mri_ca_label ru_minflt 714500 mri_ca_label ru_majflt 0 mri_ca_label ru_nswap 0 mri_ca_label ru_inblock 2640 mri_ca_label ru_oublock 440 mri_ca_label ru_msgsnd 0 mri_ca_label ru_msgrcv 0 mri_ca_label ru_nsignals 0 mri_ca_label ru_nvcsw 1 mri_ca_label ru_nivcsw 4737 auto-labeling took 31 minutes and 14 seconds. mri_cc -aseg aseg.auto_noCCseg.mgz -o aseg.auto.mgz -lta /home/shenkang/Desktop/T1/RESULTS/sub057/mri/transforms/cc_up.lta sub057 will read input aseg from aseg.auto_noCCseg.mgz writing aseg with cc labels to aseg.auto.mgz will write lta as /home/shenkang/Desktop/T1/RESULTS/sub057/mri/transforms/cc_up.lta reading aseg from /home/shenkang/Desktop/T1/RESULTS/sub057/mri/aseg.auto_noCCseg.mgz reading norm from /home/shenkang/Desktop/T1/RESULTS/sub057/mri/norm.mgz 35323 voxels in left wm, 35624 in right wm, xrange [126, 134] searching rotation angles z=[-10 4], y=[-6 8] searching scale 1 Z rot -10.0 searching scale 1 Z rot -9.8 searching scale 1 Z rot -9.5 searching scale 1 Z rot -9.3 searching scale 1 Z rot -9.0 searching scale 1 Z rot -8.8 searching scale 1 Z rot -8.5 searching scale 1 Z rot -8.3 searching scale 1 Z rot -8.0 searching scale 1 Z rot -7.8 searching scale 1 Z rot -7.5 searching scale 1 Z rot -7.3 searching scale 1 Z rot -7.0 searching scale 1 Z rot -6.8 searching scale 1 Z rot -6.5 searching scale 1 Z rot -6.3 searching scale 1 Z rot -6.0 searching scale 1 Z rot -5.8 searching scale 1 Z rot -5.5 searching scale 1 Z rot -5.3 searching scale 1 Z rot -5.0 searching scale 1 Z rot -4.8 searching scale 1 Z rot -4.5 searching scale 1 Z rot -4.3 searching scale 1 Z rot -4.0 searching scale 1 Z rot -3.8 searching scale 1 Z rot -3.5 searching scale 1 Z rot -3.3 searching scale 1 Z rot -3.0 searching scale 1 Z rot -2.8 searching scale 1 Z rot -2.5 searching scale 1 Z rot -2.3 searching scale 1 Z rot -2.0 searching scale 1 Z rot -1.8 searching scale 1 Z rot -1.5 searching scale 1 Z rot -1.3 searching scale 1 Z rot -1.0 searching scale 1 Z rot -0.8 searching scale 1 Z rot -0.5 searching scale 1 Z rot -0.3 searching scale 1 Z rot -0.0 searching scale 1 Z rot 0.2 searching scale 1 Z rot 0.5 searching scale 1 Z rot 0.7 searching scale 1 Z rot 1.0 searching scale 1 Z rot 1.2 searching scale 1 Z rot 1.5 searching scale 1 Z rot 1.7 searching scale 1 Z rot 2.0 searching scale 1 Z rot 2.2 searching scale 1 Z rot 2.5 searching scale 1 Z rot 2.7 searching scale 1 Z rot 3.0 searching scale 1 Z rot 3.2 searching scale 1 Z rot 3.5 searching scale 1 Z rot 3.7 global minimum found at slice 130.0, rotations (0.71, -3.29) final transformation (x=130.0, yr=0.714, zr=-3.287): 0.99828 0.05734 0.01245 -8.90349; -0.05733 0.99835 -0.00071 40.70622; -0.01247 -0.00000 0.99992 -5.36879; 0.00000 0.00000 0.00000 1.00000; updating x range to be [127, 131] in xformed coordinates best xformed slice 128 cc center is found at 128 95 135 eigenvectors: 0.00124 -0.01300 0.99991; 0.42999 -0.90275 -0.01227; 0.90283 0.42996 0.00447; writing aseg with callosum to /home/shenkang/Desktop/T1/RESULTS/sub057/mri/aseg.auto.mgz... corpus callosum segmentation took 0.5 minutes #-------------------------------------- #@# Merge ASeg Thu 17 Nov 2022 04:41:11 AM CST cp aseg.auto.mgz aseg.presurf.mgz #-------------------------------------------- #@# Intensity Normalization2 Thu 17 Nov 2022 04:41:11 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/mri mri_normalize -mprage -aseg aseg.presurf.mgz -mask brainmask.mgz norm.mgz brain.mgz assuming input volume is MGH (Van der Kouwe) MP-RAGE using segmentation for initial intensity normalization using MR volume brainmask.mgz to mask input volume... reading from norm.mgz... Reading aseg aseg.presurf.mgz normalizing image... processing with aseg removing outliers in the aseg WM... 1205 control points removed Building bias image building Voronoi diagram... performing soap bubble smoothing, sigma = 0... Smoothing with sigma 8 Applying bias correction building Voronoi diagram... performing soap bubble smoothing, sigma = 8... Iterating 2 times --------------------------------- 3d normalization pass 1 of 2 white matter peak found at 110 white matter peak found at 110 gm peak at 61 (61), valley at 20 (20) csf peak at 31, setting threshold to 51 building Voronoi diagram... performing soap bubble smoothing, sigma = 8... --------------------------------- 3d normalization pass 2 of 2 white matter peak found at 110 white matter peak found at 110 gm peak at 61 (61), valley at 21 (21) csf peak at 31, setting threshold to 51 building Voronoi diagram... performing soap bubble smoothing, sigma = 8... Done iterating --------------------------------- writing output to brain.mgz 3D bias adjustment took 2 minutes and 37 seconds. #-------------------------------------------- #@# Mask BFS Thu 17 Nov 2022 04:43:50 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/mri mri_mask -T 5 brain.mgz brainmask.mgz brain.finalsurfs.mgz threshold mask volume at 5 DoAbs = 0 Found 1507851 voxels in mask (pct= 8.99) Writing masked volume to brain.finalsurfs.mgz...done. #-------------------------------------------- #@# WM Segmentation Thu 17 Nov 2022 04:43:53 AM CST mri_segment -mprage brain.mgz wm.seg.mgz doing initial intensity segmentation... using local statistics to label ambiguous voxels... computing class statistics for intensity windows... WM (106.0): 106.1 +- 5.1 [79.0 --> 125.0] GM (68.0) : 67.6 +- 9.6 [30.0 --> 95.0] setting bottom of white matter range to 77.2 setting top of gray matter range to 86.8 doing initial intensity segmentation... using local statistics to label ambiguous voxels... using local geometry to label remaining ambiguous voxels... reclassifying voxels using Gaussian border classifier... removing voxels with positive offset direction... smoothing T1 volume with sigma = 0.250 removing 1-dimensional structures... 7232 sparsely connected voxels removed... thickening thin strands.... 20 segments, 3380 filled 564 bright non-wm voxels segmented. 3310 diagonally connected voxels added... white matter segmentation took 0.7 minutes writing output to wm.seg.mgz... assuming input volume is MGH (Van der Kouwe) MP-RAGE mri_edit_wm_with_aseg -keep-in wm.seg.mgz brain.mgz aseg.presurf.mgz wm.asegedit.mgz preserving editing changes in input volume... auto filling took 0.50 minutes reading wm segmentation from wm.seg.mgz... 442 voxels added to wm to prevent paths from MTL structures to cortex 2879 additional wm voxels added 0 additional wm voxels added SEG EDIT: 37474 voxels turned on, 44289 voxels turned off. propagating editing to output volume from wm.seg.mgz 115,126,128 old 110 new 110 115,126,128 old 110 new 110 writing edited volume to wm.asegedit.mgz.... mri_pretess wm.asegedit.mgz wm norm.mgz wm.mgz Iteration Number : 1 pass 1 (xy+): 17 found - 17 modified | TOTAL: 17 pass 2 (xy+): 0 found - 17 modified | TOTAL: 17 pass 1 (xy-): 14 found - 14 modified | TOTAL: 31 pass 2 (xy-): 0 found - 14 modified | TOTAL: 31 pass 1 (yz+): 20 found - 20 modified | TOTAL: 51 pass 2 (yz+): 0 found - 20 modified | TOTAL: 51 pass 1 (yz-): 12 found - 12 modified | TOTAL: 63 pass 2 (yz-): 0 found - 12 modified | TOTAL: 63 pass 1 (xz+): 20 found - 20 modified | TOTAL: 83 pass 2 (xz+): 0 found - 20 modified | TOTAL: 83 pass 1 (xz-): 13 found - 13 modified | TOTAL: 96 pass 2 (xz-): 0 found - 13 modified | TOTAL: 96 Iteration Number : 1 pass 1 (+++): 6 found - 6 modified | TOTAL: 6 pass 2 (+++): 0 found - 6 modified | TOTAL: 6 pass 1 (+++): 12 found - 12 modified | TOTAL: 18 pass 2 (+++): 0 found - 12 modified | TOTAL: 18 pass 1 (+++): 12 found - 12 modified | TOTAL: 30 pass 2 (+++): 0 found - 12 modified | TOTAL: 30 pass 1 (+++): 12 found - 12 modified | TOTAL: 42 pass 2 (+++): 0 found - 12 modified | TOTAL: 42 Iteration Number : 1 pass 1 (++): 235 found - 235 modified | TOTAL: 235 pass 2 (++): 0 found - 235 modified | TOTAL: 235 pass 1 (+-): 276 found - 276 modified | TOTAL: 511 pass 2 (+-): 0 found - 276 modified | TOTAL: 511 pass 1 (--): 217 found - 217 modified | TOTAL: 728 pass 2 (--): 0 found - 217 modified | TOTAL: 728 pass 1 (-+): 235 found - 235 modified | TOTAL: 963 pass 2 (-+): 0 found - 235 modified | TOTAL: 963 Iteration Number : 2 pass 1 (xy+): 1 found - 1 modified | TOTAL: 1 pass 2 (xy+): 0 found - 1 modified | TOTAL: 1 pass 1 (xy-): 4 found - 4 modified | TOTAL: 5 pass 2 (xy-): 0 found - 4 modified | TOTAL: 5 pass 1 (yz+): 8 found - 8 modified | TOTAL: 13 pass 2 (yz+): 0 found - 8 modified | TOTAL: 13 pass 1 (yz-): 5 found - 5 modified | TOTAL: 18 pass 2 (yz-): 0 found - 5 modified | TOTAL: 18 pass 1 (xz+): 2 found - 2 modified | TOTAL: 20 pass 2 (xz+): 0 found - 2 modified | TOTAL: 20 pass 1 (xz-): 2 found - 2 modified | TOTAL: 22 pass 2 (xz-): 0 found - 2 modified | TOTAL: 22 Iteration Number : 2 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 4 found - 4 modified | TOTAL: 4 pass 2 (+++): 0 found - 4 modified | TOTAL: 4 Iteration Number : 2 pass 1 (++): 1 found - 1 modified | TOTAL: 1 pass 2 (++): 0 found - 1 modified | TOTAL: 1 pass 1 (+-): 3 found - 3 modified | TOTAL: 4 pass 2 (+-): 0 found - 3 modified | TOTAL: 4 pass 1 (--): 1 found - 1 modified | TOTAL: 5 pass 2 (--): 0 found - 1 modified | TOTAL: 5 pass 1 (-+): 0 found - 0 modified | TOTAL: 5 Iteration Number : 3 pass 1 (xy+): 0 found - 0 modified | TOTAL: 0 pass 1 (xy-): 1 found - 1 modified | TOTAL: 1 pass 2 (xy-): 0 found - 1 modified | TOTAL: 1 pass 1 (yz+): 0 found - 0 modified | TOTAL: 1 pass 1 (yz-): 0 found - 0 modified | TOTAL: 1 pass 1 (xz+): 0 found - 0 modified | TOTAL: 1 pass 1 (xz-): 0 found - 0 modified | TOTAL: 1 Iteration Number : 3 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 Iteration Number : 3 pass 1 (++): 1 found - 1 modified | TOTAL: 1 pass 2 (++): 0 found - 1 modified | TOTAL: 1 pass 1 (+-): 0 found - 0 modified | TOTAL: 1 pass 1 (--): 0 found - 0 modified | TOTAL: 1 pass 1 (-+): 0 found - 0 modified | TOTAL: 1 Iteration Number : 4 pass 1 (xy+): 0 found - 0 modified | TOTAL: 0 pass 1 (xy-): 0 found - 0 modified | TOTAL: 0 pass 1 (yz+): 0 found - 0 modified | TOTAL: 0 pass 1 (yz-): 0 found - 0 modified | TOTAL: 0 pass 1 (xz+): 0 found - 0 modified | TOTAL: 0 pass 1 (xz-): 0 found - 0 modified | TOTAL: 0 Iteration Number : 4 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 Iteration Number : 4 pass 1 (++): 0 found - 0 modified | TOTAL: 0 pass 1 (+-): 0 found - 0 modified | TOTAL: 0 pass 1 (--): 0 found - 0 modified | TOTAL: 0 pass 1 (-+): 0 found - 0 modified | TOTAL: 0 Total Number of Modified Voxels = 1134 (out of 444863: 0.254910) binarizing input wm segmentation... Ambiguous edge configurations... mri_pretess done #-------------------------------------------- #@# Fill Thu 17 Nov 2022 04:45:10 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/mri mri_fill -a ../scripts/ponscc.cut.log -xform transforms/talairach.lta -segmentation aseg.auto_noCCseg.mgz wm.mgz filled.mgz logging cutting plane coordinates to ../scripts/ponscc.cut.log... INFO: Using transforms/talairach.lta and its offset for Talairach volume ... using segmentation aseg.auto_noCCseg.mgz... reading input volume...done. searching for cutting planes...voxel to talairach voxel transform 1.05287 0.05669 0.02683 -19.03613; -0.03979 1.03891 -0.26299 46.90993; -0.03060 0.28383 1.11808 -59.41409; 0.00000 0.00000 0.00000 1.00000; voxel to talairach voxel transform 1.05287 0.05669 0.02683 -19.03613; -0.03979 1.03891 -0.26299 46.90993; -0.03060 0.28383 1.11808 -59.41409; 0.00000 0.00000 0.00000 1.00000; reading segmented volume aseg.auto_noCCseg.mgz... Looking for area (min, max) = (350, 1400) area[0] = 1024 (min = 350, max = 1400), aspect = 0.51 (min = 0.10, max = 0.75) no need to search using seed (128, 124, 148), TAL = (0.0, 20.0, 4.0) talairach voxel to voxel transform 0.94722 -0.04273 -0.03278 18.08835; 0.04025 0.90261 0.21135 -29.01822; 0.01571 -0.23030 0.83984 61.00113; 0.00000 0.00000 0.00000 1.00000; segmentation indicates cc at (128, 124, 148) --> (0.0, 20.0, 4.0) done. writing output to filled.mgz... filling took 0.6 minutes talairach cc position changed to (0.00, 20.00, 4.00) Erasing brainstem...done. seed_search_size = 9, min_neighbors = 5 search rh wm seed point around talairach space:(18.00, 20.00, 4.00) SRC: (112.13, 118.61, 158.47) search lh wm seed point around talairach space (-18.00, 20.00, 4.00), SRC: (146.23, 120.06, 159.03) compute mri_fill using aseg Erasing Brain Stem and Cerebellum ... Define left and right masks using aseg: Building Voronoi diagram ... Using the Voronoi diagram to separate WM into two hemispheres ... Find the largest connected component for each hemisphere ... #-------------------------------------------- #@# Tessellate lh Thu 17 Nov 2022 04:45:47 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mri_pretess ../mri/filled.mgz 255 ../mri/norm.mgz ../mri/filled-pretess255.mgz Iteration Number : 1 pass 1 (xy+): 0 found - 0 modified | TOTAL: 0 pass 1 (xy-): 2 found - 2 modified | TOTAL: 2 pass 2 (xy-): 0 found - 2 modified | TOTAL: 2 pass 1 (yz+): 1 found - 1 modified | TOTAL: 3 pass 2 (yz+): 0 found - 1 modified | TOTAL: 3 pass 1 (yz-): 0 found - 0 modified | TOTAL: 3 pass 1 (xz+): 4 found - 4 modified | TOTAL: 7 pass 2 (xz+): 0 found - 4 modified | TOTAL: 7 pass 1 (xz-): 1 found - 1 modified | TOTAL: 8 pass 2 (xz-): 0 found - 1 modified | TOTAL: 8 Iteration Number : 1 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 Iteration Number : 1 pass 1 (++): 1 found - 1 modified | TOTAL: 1 pass 2 (++): 0 found - 1 modified | TOTAL: 1 pass 1 (+-): 2 found - 2 modified | TOTAL: 3 pass 2 (+-): 0 found - 2 modified | TOTAL: 3 pass 1 (--): 0 found - 0 modified | TOTAL: 3 pass 1 (-+): 0 found - 0 modified | TOTAL: 3 Iteration Number : 2 pass 1 (xy+): 0 found - 0 modified | TOTAL: 0 pass 1 (xy-): 0 found - 0 modified | TOTAL: 0 pass 1 (yz+): 0 found - 0 modified | TOTAL: 0 pass 1 (yz-): 0 found - 0 modified | TOTAL: 0 pass 1 (xz+): 0 found - 0 modified | TOTAL: 0 pass 1 (xz-): 0 found - 0 modified | TOTAL: 0 Iteration Number : 2 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 Iteration Number : 2 pass 1 (++): 0 found - 0 modified | TOTAL: 0 pass 1 (+-): 0 found - 0 modified | TOTAL: 0 pass 1 (--): 0 found - 0 modified | TOTAL: 0 pass 1 (-+): 0 found - 0 modified | TOTAL: 0 Total Number of Modified Voxels = 11 (out of 213667: 0.005148) Ambiguous edge configurations... mri_pretess done mri_tessellate ../mri/filled-pretess255.mgz 255 ../surf/lh.orig.nofix $Id: mri_tessellate.c,v 1.38.2.1 2016/07/26 18:46:38 zkaufman Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ slice 60: 1806 vertices, 1983 faces slice 70: 7926 vertices, 8169 faces slice 80: 16024 vertices, 16321 faces slice 90: 25696 vertices, 26063 faces slice 100: 36635 vertices, 37057 faces slice 110: 48964 vertices, 49365 faces slice 120: 62619 vertices, 63117 faces slice 130: 77689 vertices, 78178 faces slice 140: 91680 vertices, 92175 faces slice 150: 103689 vertices, 104068 faces slice 160: 112631 vertices, 112960 faces slice 170: 121743 vertices, 122057 faces slice 180: 129540 vertices, 129812 faces slice 190: 136148 vertices, 136368 faces slice 200: 139120 vertices, 139166 faces slice 210: 139120 vertices, 139166 faces slice 220: 139120 vertices, 139166 faces slice 230: 139120 vertices, 139166 faces slice 240: 139120 vertices, 139166 faces slice 250: 139120 vertices, 139166 faces using the conformed surface RAS to save vertex points... writing ../surf/lh.orig.nofix using vox2ras matrix: -1.00000 0.00000 0.00000 128.00000; 0.00000 0.00000 1.00000 -128.00000; 0.00000 -1.00000 0.00000 128.00000; 0.00000 0.00000 0.00000 1.00000; rm -f ../mri/filled-pretess255.mgz mris_extract_main_component ../surf/lh.orig.nofix ../surf/lh.orig.nofix counting number of connected components... 139120 voxel in cpt #1: X=-46 [v=139120,e=417498,f=278332] located at (-29.458971, -3.906563, 25.985523) For the whole surface: X=-46 [v=139120,e=417498,f=278332] One single component has been found nothing to do done #-------------------------------------------- #@# Tessellate rh Thu 17 Nov 2022 04:45:53 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mri_pretess ../mri/filled.mgz 127 ../mri/norm.mgz ../mri/filled-pretess127.mgz Iteration Number : 1 pass 1 (xy+): 0 found - 0 modified | TOTAL: 0 pass 1 (xy-): 0 found - 0 modified | TOTAL: 0 pass 1 (yz+): 0 found - 0 modified | TOTAL: 0 pass 1 (yz-): 1 found - 1 modified | TOTAL: 1 pass 2 (yz-): 0 found - 1 modified | TOTAL: 1 pass 1 (xz+): 1 found - 1 modified | TOTAL: 2 pass 2 (xz+): 0 found - 1 modified | TOTAL: 2 pass 1 (xz-): 1 found - 1 modified | TOTAL: 3 pass 2 (xz-): 0 found - 1 modified | TOTAL: 3 Iteration Number : 1 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 Iteration Number : 1 pass 1 (++): 0 found - 0 modified | TOTAL: 0 pass 1 (+-): 0 found - 0 modified | TOTAL: 0 pass 1 (--): 0 found - 0 modified | TOTAL: 0 pass 1 (-+): 0 found - 0 modified | TOTAL: 0 Iteration Number : 2 pass 1 (xy+): 0 found - 0 modified | TOTAL: 0 pass 1 (xy-): 0 found - 0 modified | TOTAL: 0 pass 1 (yz+): 0 found - 0 modified | TOTAL: 0 pass 1 (yz-): 0 found - 0 modified | TOTAL: 0 pass 1 (xz+): 0 found - 0 modified | TOTAL: 0 pass 1 (xz-): 0 found - 0 modified | TOTAL: 0 Iteration Number : 2 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 Iteration Number : 2 pass 1 (++): 0 found - 0 modified | TOTAL: 0 pass 1 (+-): 0 found - 0 modified | TOTAL: 0 pass 1 (--): 0 found - 0 modified | TOTAL: 0 pass 1 (-+): 0 found - 0 modified | TOTAL: 0 Total Number of Modified Voxels = 3 (out of 213099: 0.001408) Ambiguous edge configurations... mri_pretess done mri_tessellate ../mri/filled-pretess127.mgz 127 ../surf/rh.orig.nofix $Id: mri_tessellate.c,v 1.38.2.1 2016/07/26 18:46:38 zkaufman Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ slice 60: 193 vertices, 228 faces slice 70: 3464 vertices, 3628 faces slice 80: 10213 vertices, 10495 faces slice 90: 19846 vertices, 20171 faces slice 100: 31612 vertices, 32028 faces slice 110: 45262 vertices, 45659 faces slice 120: 59813 vertices, 60320 faces slice 130: 76067 vertices, 76612 faces slice 140: 90223 vertices, 90705 faces slice 150: 102908 vertices, 103320 faces slice 160: 112230 vertices, 112592 faces slice 170: 121010 vertices, 121333 faces slice 180: 129240 vertices, 129538 faces slice 190: 136169 vertices, 136424 faces slice 200: 139262 vertices, 139320 faces slice 210: 139262 vertices, 139320 faces slice 220: 139262 vertices, 139320 faces slice 230: 139262 vertices, 139320 faces slice 240: 139262 vertices, 139320 faces slice 250: 139262 vertices, 139320 faces using the conformed surface RAS to save vertex points... writing ../surf/rh.orig.nofix using vox2ras matrix: -1.00000 0.00000 0.00000 128.00000; 0.00000 0.00000 1.00000 -128.00000; 0.00000 -1.00000 0.00000 128.00000; 0.00000 0.00000 0.00000 1.00000; rm -f ../mri/filled-pretess127.mgz mris_extract_main_component ../surf/rh.orig.nofix ../surf/rh.orig.nofix counting number of connected components... 139262 voxel in cpt #1: X=-58 [v=139262,e=417960,f=278640] located at (26.380779, -1.386042, 27.283781) For the whole surface: X=-58 [v=139262,e=417960,f=278640] One single component has been found nothing to do done #-------------------------------------------- #@# Smooth1 lh Thu 17 Nov 2022 04:45:59 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_smooth -nw -seed 1234 ../surf/lh.orig.nofix ../surf/lh.smoothwm.nofix setting seed for random number generator to 1234 smoothing surface tessellation for 10 iterations... smoothing complete - recomputing first and second fundamental forms... #-------------------------------------------- #@# Smooth1 rh Thu 17 Nov 2022 04:46:03 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_smooth -nw -seed 1234 ../surf/rh.orig.nofix ../surf/rh.smoothwm.nofix setting seed for random number generator to 1234 smoothing surface tessellation for 10 iterations... smoothing complete - recomputing first and second fundamental forms... #-------------------------------------------- #@# Inflation1 lh Thu 17 Nov 2022 04:46:07 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_inflate -no-save-sulc ../surf/lh.smoothwm.nofix ../surf/lh.inflated.nofix Not saving sulc Reading ../surf/lh.smoothwm.nofix avg radius = 44.3 mm, total surface area = 72844 mm^2 writing inflated surface to ../surf/lh.inflated.nofix inflation took 0.6 minutes step 000: RMS=0.156 (target=0.015) step 005: RMS=0.118 (target=0.015) step 010: RMS=0.088 (target=0.015) step 015: RMS=0.075 (target=0.015) step 020: RMS=0.064 (target=0.015) step 025: RMS=0.056 (target=0.015) step 030: RMS=0.049 (target=0.015) step 035: RMS=0.043 (target=0.015) step 040: RMS=0.039 (target=0.015) step 045: RMS=0.036 (target=0.015) step 050: RMS=0.034 (target=0.015) step 055: RMS=0.032 (target=0.015) step 060: RMS=0.032 (target=0.015) inflation complete. Not saving sulc mris_inflate utimesec 33.475229 mris_inflate stimesec 0.055998 mris_inflate ru_maxrss 183264 mris_inflate ru_ixrss 0 mris_inflate ru_idrss 0 mris_inflate ru_isrss 0 mris_inflate ru_minflt 44123 mris_inflate ru_majflt 0 mris_inflate ru_nswap 0 mris_inflate ru_inblock 0 mris_inflate ru_oublock 9792 mris_inflate ru_msgsnd 0 mris_inflate ru_msgrcv 0 mris_inflate ru_nsignals 0 mris_inflate ru_nvcsw 0 mris_inflate ru_nivcsw 59 #-------------------------------------------- #@# Inflation1 rh Thu 17 Nov 2022 04:46:41 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_inflate -no-save-sulc ../surf/rh.smoothwm.nofix ../surf/rh.inflated.nofix Not saving sulc Reading ../surf/rh.smoothwm.nofix avg radius = 43.6 mm, total surface area = 72640 mm^2 writing inflated surface to ../surf/rh.inflated.nofix inflation took 0.7 minutes step 000: RMS=0.161 (target=0.015) step 005: RMS=0.122 (target=0.015) step 010: RMS=0.093 (target=0.015) step 015: RMS=0.080 (target=0.015) step 020: RMS=0.069 (target=0.015) step 025: RMS=0.062 (target=0.015) step 030: RMS=0.056 (target=0.015) step 035: RMS=0.051 (target=0.015) step 040: RMS=0.049 (target=0.015) step 045: RMS=0.047 (target=0.015) step 050: RMS=0.045 (target=0.015) step 055: RMS=0.044 (target=0.015) step 060: RMS=0.044 (target=0.015) inflation complete. Not saving sulc mris_inflate utimesec 41.801508 mris_inflate stimesec 0.047997 mris_inflate ru_maxrss 183228 mris_inflate ru_ixrss 0 mris_inflate ru_idrss 0 mris_inflate ru_isrss 0 mris_inflate ru_minflt 44161 mris_inflate ru_majflt 0 mris_inflate ru_nswap 0 mris_inflate ru_inblock 0 mris_inflate ru_oublock 9800 mris_inflate ru_msgsnd 0 mris_inflate ru_msgrcv 0 mris_inflate ru_nsignals 0 mris_inflate ru_nvcsw 0 mris_inflate ru_nivcsw 43 #-------------------------------------------- #@# QSphere lh Thu 17 Nov 2022 04:47:23 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_sphere -q -seed 1234 ../surf/lh.inflated.nofix ../surf/lh.qsphere.nofix doing quick spherical unfolding. setting seed for random number genererator to 1234 $Id: mris_sphere.c,v 1.61 2016/01/20 23:42:15 greve Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading original vertex positions... unfolding cortex into spherical form... surface projected - minimizing metric distortion... vertex spacing 0.98 +- 0.56 (0.00-->8.83) (max @ vno 47105 --> 47112) face area 0.03 +- 0.04 (-0.39-->1.25) == Number of threads available to mris_sphere for OpenMP = 1 == scaling brain by 0.336... inflating to sphere (rms error < 2.00) 000: dt: 0.0000, rms radial error=175.175, avgs=0 005/300: dt: 0.9000, rms radial error=174.920, avgs=0 010/300: dt: 0.9000, rms radial error=174.373, avgs=0 015/300: dt: 0.9000, rms radial error=173.654, avgs=0 020/300: dt: 0.9000, rms radial error=172.836, avgs=0 025/300: dt: 0.9000, rms radial error=171.961, avgs=0 030/300: dt: 0.9000, rms radial error=171.055, avgs=0 035/300: dt: 0.9000, rms radial error=170.131, avgs=0 040/300: dt: 0.9000, rms radial error=169.198, avgs=0 045/300: dt: 0.9000, rms radial error=168.263, avgs=0 050/300: dt: 0.9000, rms radial error=167.328, avgs=0 055/300: dt: 0.9000, rms radial error=166.395, avgs=0 060/300: dt: 0.9000, rms radial error=165.465, avgs=0 065/300: dt: 0.9000, rms radial error=164.540, avgs=0 070/300: dt: 0.9000, rms radial error=163.618, avgs=0 075/300: dt: 0.9000, rms radial error=162.702, avgs=0 080/300: dt: 0.9000, rms radial error=161.790, avgs=0 085/300: dt: 0.9000, rms radial error=160.883, avgs=0 090/300: dt: 0.9000, rms radial error=159.981, avgs=0 095/300: dt: 0.9000, rms radial error=159.083, avgs=0 100/300: dt: 0.9000, rms radial error=158.191, avgs=0 105/300: dt: 0.9000, rms radial error=157.303, avgs=0 110/300: dt: 0.9000, rms radial error=156.420, avgs=0 115/300: dt: 0.9000, rms radial error=155.542, avgs=0 120/300: dt: 0.9000, rms radial error=154.668, avgs=0 125/300: dt: 0.9000, rms radial error=153.799, avgs=0 130/300: dt: 0.9000, rms radial error=152.935, avgs=0 135/300: dt: 0.9000, rms radial error=152.076, avgs=0 140/300: dt: 0.9000, rms radial error=151.221, avgs=0 145/300: dt: 0.9000, rms radial error=150.371, avgs=0 150/300: dt: 0.9000, rms radial error=149.525, avgs=0 155/300: dt: 0.9000, rms radial error=148.685, avgs=0 160/300: dt: 0.9000, rms radial error=147.848, avgs=0 165/300: dt: 0.9000, rms radial error=147.016, avgs=0 170/300: dt: 0.9000, rms radial error=146.189, avgs=0 175/300: dt: 0.9000, rms radial error=145.366, avgs=0 180/300: dt: 0.9000, rms radial error=144.548, avgs=0 185/300: dt: 0.9000, rms radial error=143.734, avgs=0 190/300: dt: 0.9000, rms radial error=142.925, avgs=0 195/300: dt: 0.9000, rms radial error=142.120, avgs=0 200/300: dt: 0.9000, rms radial error=141.320, avgs=0 205/300: dt: 0.9000, rms radial error=140.524, avgs=0 210/300: dt: 0.9000, rms radial error=139.733, avgs=0 215/300: dt: 0.9000, rms radial error=138.945, avgs=0 220/300: dt: 0.9000, rms radial error=138.163, avgs=0 225/300: dt: 0.9000, rms radial error=137.384, avgs=0 230/300: dt: 0.9000, rms radial error=136.610, avgs=0 235/300: dt: 0.9000, rms radial error=135.841, avgs=0 240/300: dt: 0.9000, rms radial error=135.075, avgs=0 245/300: dt: 0.9000, rms radial error=134.314, avgs=0 250/300: dt: 0.9000, rms radial error=133.557, avgs=0 255/300: dt: 0.9000, rms radial error=132.805, avgs=0 260/300: dt: 0.9000, rms radial error=132.056, avgs=0 265/300: dt: 0.9000, rms radial error=131.312, avgs=0 270/300: dt: 0.9000, rms radial error=130.572, avgs=0 275/300: dt: 0.9000, rms radial error=129.836, avgs=0 280/300: dt: 0.9000, rms radial error=129.104, avgs=0 285/300: dt: 0.9000, rms radial error=128.376, avgs=0 290/300: dt: 0.9000, rms radial error=127.652, avgs=0 295/300: dt: 0.9000, rms radial error=126.933, avgs=0 300/300: dt: 0.9000, rms radial error=126.217, avgs=0 spherical inflation complete. epoch 1 (K=10.0), pass 1, starting sse = 15880.62 taking momentum steps... taking momentum steps... taking momentum steps... pass 1 complete, delta sse/iter = 0.00/10 = 0.00004 epoch 2 (K=40.0), pass 1, starting sse = 2528.18 taking momentum steps... taking momentum steps... taking momentum steps... pass 1 complete, delta sse/iter = 0.00/10 = 0.00013 epoch 3 (K=160.0), pass 1, starting sse = 225.50 taking momentum steps... taking momentum steps... taking momentum steps... pass 1 complete, delta sse/iter = 0.09/11 = 0.00821 epoch 4 (K=640.0), pass 1, starting sse = 10.71 taking momentum steps... taking momentum steps... taking momentum steps... pass 1 complete, delta sse/iter = 0.04/10 = 0.00398 final distance error %24.58 writing spherical brain to ../surf/lh.qsphere.nofix spherical transformation took 0.06 hours mris_sphere utimesec 217.480919 mris_sphere stimesec 0.103998 mris_sphere ru_maxrss 183368 mris_sphere ru_ixrss 0 mris_sphere ru_idrss 0 mris_sphere ru_isrss 0 mris_sphere ru_minflt 44129 mris_sphere ru_majflt 0 mris_sphere ru_nswap 0 mris_sphere ru_inblock 0 mris_sphere ru_oublock 9792 mris_sphere ru_msgsnd 0 mris_sphere ru_msgrcv 0 mris_sphere ru_nsignals 0 mris_sphere ru_nvcsw 0 mris_sphere ru_nivcsw 169 FSRUNTIME@ mris_sphere 0.0604 hours 1 threads #-------------------------------------------- #@# QSphere rh Thu 17 Nov 2022 04:51:01 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_sphere -q -seed 1234 ../surf/rh.inflated.nofix ../surf/rh.qsphere.nofix doing quick spherical unfolding. setting seed for random number genererator to 1234 $Id: mris_sphere.c,v 1.61 2016/01/20 23:42:15 greve Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading original vertex positions... unfolding cortex into spherical form... surface projected - minimizing metric distortion... vertex spacing 0.98 +- 0.56 (0.00-->8.10) (max @ vno 46097 --> 46098) face area 0.03 +- 0.04 (-0.44-->1.35) == Number of threads available to mris_sphere for OpenMP = 1 == scaling brain by 0.347... inflating to sphere (rms error < 2.00) 000: dt: 0.0000, rms radial error=174.572, avgs=0 005/300: dt: 0.9000, rms radial error=174.316, avgs=0 010/300: dt: 0.9000, rms radial error=173.767, avgs=0 015/300: dt: 0.9000, rms radial error=173.046, avgs=0 020/300: dt: 0.9000, rms radial error=172.227, avgs=0 025/300: dt: 0.9000, rms radial error=171.351, avgs=0 030/300: dt: 0.9000, rms radial error=170.445, avgs=0 035/300: dt: 0.9000, rms radial error=169.522, avgs=0 040/300: dt: 0.9000, rms radial error=168.591, avgs=0 045/300: dt: 0.9000, rms radial error=167.658, avgs=0 050/300: dt: 0.9000, rms radial error=166.725, avgs=0 055/300: dt: 0.9000, rms radial error=165.795, avgs=0 060/300: dt: 0.9000, rms radial error=164.868, avgs=0 065/300: dt: 0.9000, rms radial error=163.946, avgs=0 070/300: dt: 0.9000, rms radial error=163.027, avgs=0 075/300: dt: 0.9000, rms radial error=162.114, avgs=0 080/300: dt: 0.9000, rms radial error=161.205, avgs=0 085/300: dt: 0.9000, rms radial error=160.300, avgs=0 090/300: dt: 0.9000, rms radial error=159.401, avgs=0 095/300: dt: 0.9000, rms radial error=158.506, avgs=0 100/300: dt: 0.9000, rms radial error=157.616, avgs=0 105/300: dt: 0.9000, rms radial error=156.731, avgs=0 110/300: dt: 0.9000, rms radial error=155.850, avgs=0 115/300: dt: 0.9000, rms radial error=154.975, avgs=0 120/300: dt: 0.9000, rms radial error=154.103, avgs=0 125/300: dt: 0.9000, rms radial error=153.237, avgs=0 130/300: dt: 0.9000, rms radial error=152.375, avgs=0 135/300: dt: 0.9000, rms radial error=151.518, avgs=0 140/300: dt: 0.9000, rms radial error=150.666, avgs=0 145/300: dt: 0.9000, rms radial error=149.818, avgs=0 150/300: dt: 0.9000, rms radial error=148.975, avgs=0 155/300: dt: 0.9000, rms radial error=148.136, avgs=0 160/300: dt: 0.9000, rms radial error=147.302, avgs=0 165/300: dt: 0.9000, rms radial error=146.472, avgs=0 170/300: dt: 0.9000, rms radial error=145.647, avgs=0 175/300: dt: 0.9000, rms radial error=144.827, avgs=0 180/300: dt: 0.9000, rms radial error=144.011, avgs=0 185/300: dt: 0.9000, rms radial error=143.199, avgs=0 190/300: dt: 0.9000, rms radial error=142.392, avgs=0 195/300: dt: 0.9000, rms radial error=141.589, avgs=0 200/300: dt: 0.9000, rms radial error=140.790, avgs=0 205/300: dt: 0.9000, rms radial error=139.996, avgs=0 210/300: dt: 0.9000, rms radial error=139.206, avgs=0 215/300: dt: 0.9000, rms radial error=138.421, avgs=0 220/300: dt: 0.9000, rms radial error=137.640, avgs=0 225/300: dt: 0.9000, rms radial error=136.864, avgs=0 230/300: dt: 0.9000, rms radial error=136.092, avgs=0 235/300: dt: 0.9000, rms radial error=135.324, avgs=0 240/300: dt: 0.9000, rms radial error=134.561, avgs=0 245/300: dt: 0.9000, rms radial error=133.801, avgs=0 250/300: dt: 0.9000, rms radial error=133.047, avgs=0 255/300: dt: 0.9000, rms radial error=132.296, avgs=0 260/300: dt: 0.9000, rms radial error=131.549, avgs=0 265/300: dt: 0.9000, rms radial error=130.807, avgs=0 270/300: dt: 0.9000, rms radial error=130.069, avgs=0 275/300: dt: 0.9000, rms radial error=129.335, avgs=0 280/300: dt: 0.9000, rms radial error=128.605, avgs=0 285/300: dt: 0.9000, rms radial error=127.879, avgs=0 290/300: dt: 0.9000, rms radial error=127.158, avgs=0 295/300: dt: 0.9000, rms radial error=126.440, avgs=0 300/300: dt: 0.9000, rms radial error=125.727, avgs=0 spherical inflation complete. epoch 1 (K=10.0), pass 1, starting sse = 15712.45 taking momentum steps... taking momentum steps... taking momentum steps... pass 1 complete, delta sse/iter = 0.00/10 = 0.00003 epoch 2 (K=40.0), pass 1, starting sse = 2454.95 taking momentum steps... taking momentum steps... taking momentum steps... pass 1 complete, delta sse/iter = 0.00/10 = 0.00002 epoch 3 (K=160.0), pass 1, starting sse = 215.20 taking momentum steps... taking momentum steps... taking momentum steps... pass 1 complete, delta sse/iter = 0.04/10 = 0.00436 epoch 4 (K=640.0), pass 1, starting sse = 14.06 taking momentum steps... taking momentum steps... taking momentum steps... pass 1 complete, delta sse/iter = 0.05/10 = 0.00475 final distance error %24.64 writing spherical brain to ../surf/rh.qsphere.nofix spherical transformation took 0.05 hours mris_sphere utimesec 165.018336 mris_sphere stimesec 0.071999 mris_sphere ru_maxrss 183800 mris_sphere ru_ixrss 0 mris_sphere ru_idrss 0 mris_sphere ru_isrss 0 mris_sphere ru_minflt 44177 mris_sphere ru_majflt 0 mris_sphere ru_nswap 0 mris_sphere ru_inblock 0 mris_sphere ru_oublock 9800 mris_sphere ru_msgsnd 0 mris_sphere ru_msgrcv 0 mris_sphere ru_nsignals 0 mris_sphere ru_nvcsw 0 mris_sphere ru_nivcsw 83 FSRUNTIME@ mris_sphere 0.0459 hours 1 threads #-------------------------------------------- #@# Fix Topology Copy lh Thu 17 Nov 2022 04:53:46 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts cp ../surf/lh.orig.nofix ../surf/lh.orig cp ../surf/lh.inflated.nofix ../surf/lh.inflated #-------------------------------------------- #@# Fix Topology Copy rh Thu 17 Nov 2022 04:53:46 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts cp ../surf/rh.orig.nofix ../surf/rh.orig cp ../surf/rh.inflated.nofix ../surf/rh.inflated #@# Fix Topology lh Thu 17 Nov 2022 04:53:46 AM CST mris_fix_topology -rusage /home/shenkang/Desktop/T1/RESULTS/sub057/touch/rusage.mris_fix_topology.lh.dat -mgz -sphere qsphere.nofix -ga -seed 1234 sub057 lh reading spherical homeomorphism from 'qsphere.nofix' using genetic algorithm with optimized parameters setting seed for random number genererator to 1234 ************************************************************* Topology Correction Parameters retessellation mode: genetic search number of patches/generation : 10 number of generations : 10 surface mri loglikelihood coefficient : 1.0 volume mri loglikelihood coefficient : 10.0 normal dot loglikelihood coefficient : 1.0 quadratic curvature loglikelihood coefficient : 1.0 volume resolution : 2 eliminate vertices during search : 1 initial patch selection : 1 select all defect vertices : 0 ordering dependant retessellation: 0 use precomputed edge table : 0 smooth retessellated patch : 2 match retessellated patch : 1 verbose mode : 0 ************************************************************* INFO: assuming .mgz format $Id: mris_fix_topology.c,v 1.50.2.1 2016/10/27 22:25:58 zkaufman Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ before topology correction, eno=-46 (nv=139120, nf=278332, ne=417498, g=24) using quasi-homeomorphic spherical map to tessellate cortical surface... Correction of the Topology Finding true center and radius of Spherical Surface...done Surface centered at (0,0,0) with radius 100.0 in 8 iterations marking ambiguous vertices... 2606 ambiguous faces found in tessellation segmenting defects... 26 defects found, arbitrating ambiguous regions... analyzing neighboring defects... -merging segment 9 into 7 25 defects to be corrected 0 vertices coincident reading input surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.qsphere.nofix... reading brain volume from brain... reading wm segmentation from wm... Computing Initial Surface Statistics -face loglikelihood: -9.6792 (-4.8396) -vertex loglikelihood: -6.4769 (-3.2384) -normal dot loglikelihood: -3.6497 (-3.6497) -quad curv loglikelihood: -6.5394 (-3.2697) Total Loglikelihood : -26.3452 CORRECTING DEFECT 0 (vertices=37, convex hull=77, v0=6712) After retessellation of defect 0 (v0=6712), euler #=-23 (137533,411944,274388) : difference with theory (-22) = 1 CORRECTING DEFECT 1 (vertices=70, convex hull=76, v0=7265) After retessellation of defect 1 (v0=7265), euler #=-22 (137558,412054,274474) : difference with theory (-21) = 1 CORRECTING DEFECT 2 (vertices=47, convex hull=68, v0=11101) After retessellation of defect 2 (v0=11101), euler #=-21 (137572,412126,274533) : difference with theory (-20) = 1 CORRECTING DEFECT 3 (vertices=44, convex hull=91, v0=18122) After retessellation of defect 3 (v0=18122), euler #=-20 (137599,412245,274626) : difference with theory (-19) = 1 CORRECTING DEFECT 4 (vertices=37, convex hull=73, v0=18460) After retessellation of defect 4 (v0=18460), euler #=-19 (137609,412309,274681) : difference with theory (-18) = 1 CORRECTING DEFECT 5 (vertices=19, convex hull=47, v0=22682) After retessellation of defect 5 (v0=22682), euler #=-18 (137620,412357,274719) : difference with theory (-17) = 1 CORRECTING DEFECT 6 (vertices=66, convex hull=75, v0=40475) After retessellation of defect 6 (v0=40475), euler #=-17 (137637,412433,274779) : difference with theory (-16) = 1 CORRECTING DEFECT 7 (vertices=48, convex hull=88, v0=44298) After retessellation of defect 7 (v0=44298), euler #=-15 (137657,412533,274861) : difference with theory (-15) = 0 CORRECTING DEFECT 8 (vertices=110, convex hull=123, v0=44732) After retessellation of defect 8 (v0=44732), euler #=-14 (137689,412682,274979) : difference with theory (-14) = 0 CORRECTING DEFECT 9 (vertices=24, convex hull=54, v0=52288) After retessellation of defect 9 (v0=52288), euler #=-13 (137698,412730,275019) : difference with theory (-13) = 0 CORRECTING DEFECT 10 (vertices=49, convex hull=73, v0=55812) After retessellation of defect 10 (v0=55812), euler #=-12 (137723,412833,275098) : difference with theory (-12) = 0 CORRECTING DEFECT 11 (vertices=33, convex hull=61, v0=58251) After retessellation of defect 11 (v0=58251), euler #=-11 (137742,412912,275159) : difference with theory (-11) = 0 CORRECTING DEFECT 12 (vertices=19, convex hull=32, v0=60289) After retessellation of defect 12 (v0=60289), euler #=-10 (137744,412929,275175) : difference with theory (-10) = 0 CORRECTING DEFECT 13 (vertices=199, convex hull=72, v0=65487) After retessellation of defect 13 (v0=65487), euler #=-9 (137753,412985,275223) : difference with theory (-9) = 0 CORRECTING DEFECT 14 (vertices=18, convex hull=49, v0=68358) After retessellation of defect 14 (v0=68358), euler #=-8 (137762,413029,275259) : difference with theory (-8) = 0 CORRECTING DEFECT 15 (vertices=45, convex hull=33, v0=74461) After retessellation of defect 15 (v0=74461), euler #=-7 (137768,413059,275284) : difference with theory (-7) = 0 CORRECTING DEFECT 16 (vertices=53, convex hull=79, v0=78429) After retessellation of defect 16 (v0=78429), euler #=-6 (137786,413146,275354) : difference with theory (-6) = 0 CORRECTING DEFECT 17 (vertices=40, convex hull=26, v0=81810) After retessellation of defect 17 (v0=81810), euler #=-5 (137792,413172,275375) : difference with theory (-5) = 0 CORRECTING DEFECT 18 (vertices=392, convex hull=67, v0=81896) After retessellation of defect 18 (v0=81896), euler #=-4 (137823,413296,275469) : difference with theory (-4) = 0 CORRECTING DEFECT 19 (vertices=17, convex hull=50, v0=84358) After retessellation of defect 19 (v0=84358), euler #=-3 (137836,413355,275516) : difference with theory (-3) = 0 CORRECTING DEFECT 20 (vertices=49, convex hull=79, v0=92593) After retessellation of defect 20 (v0=92593), euler #=-2 (137857,413453,275594) : difference with theory (-2) = 0 CORRECTING DEFECT 21 (vertices=27, convex hull=33, v0=94171) After retessellation of defect 21 (v0=94171), euler #=-1 (137863,413483,275619) : difference with theory (-1) = 0 CORRECTING DEFECT 22 (vertices=64, convex hull=76, v0=98357) After retessellation of defect 22 (v0=98357), euler #=0 (137887,413591,275704) : difference with theory (0) = 0 CORRECTING DEFECT 23 (vertices=44, convex hull=84, v0=99072) After retessellation of defect 23 (v0=99072), euler #=1 (137909,413690,275782) : difference with theory (1) = 0 CORRECTING DEFECT 24 (vertices=46, convex hull=72, v0=109117) After retessellation of defect 24 (v0=109117), euler #=2 (137924,413766,275844) : difference with theory (2) = 0 computing original vertex metric properties... storing new metric properties... computing tessellation statistics... vertex spacing 0.88 +- 0.22 (0.12-->7.63) (max @ vno 96913 --> 100223) face area 0.00 +- 0.00 (0.00-->0.00) performing soap bubble on retessellated vertices for 0 iterations... vertex spacing 0.88 +- 0.22 (0.12-->7.63) (max @ vno 96913 --> 100223) face area 0.00 +- 0.00 (0.00-->0.00) tessellation finished, orienting corrected surface... 96 mutations (33.3%), 192 crossovers (66.7%), 96 vertices were eliminated building final representation... 1196 vertices and 0 faces have been removed from triangulation after topology correction, eno=2 (nv=137924, nf=275844, ne=413766, g=0) writing corrected surface to /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.orig... 0.000 % of the vertices (0 vertices) exhibit an orientation change topology fixing took 7.4 minutes 0 defective edges removing intersecting faces 000: 125 intersecting 001: 10 intersecting 002: 6 intersecting mris_fix_topology utimesec 442.971938 mris_fix_topology stimesec 0.115998 mris_fix_topology ru_maxrss 434056 mris_fix_topology ru_ixrss 0 mris_fix_topology ru_idrss 0 mris_fix_topology ru_isrss 0 mris_fix_topology ru_minflt 107455 mris_fix_topology ru_majflt 0 mris_fix_topology ru_nswap 0 mris_fix_topology ru_inblock 0 mris_fix_topology ru_oublock 12968 mris_fix_topology ru_msgsnd 0 mris_fix_topology ru_msgrcv 0 mris_fix_topology ru_nsignals 0 mris_fix_topology ru_nvcsw 1 mris_fix_topology ru_nivcsw 374 FSRUNTIME@ mris_fix_topology lh 0.1231 hours 1 threads #@# Fix Topology rh Thu 17 Nov 2022 05:01:09 AM CST mris_fix_topology -rusage /home/shenkang/Desktop/T1/RESULTS/sub057/touch/rusage.mris_fix_topology.rh.dat -mgz -sphere qsphere.nofix -ga -seed 1234 sub057 rh reading spherical homeomorphism from 'qsphere.nofix' using genetic algorithm with optimized parameters setting seed for random number genererator to 1234 ************************************************************* Topology Correction Parameters retessellation mode: genetic search number of patches/generation : 10 number of generations : 10 surface mri loglikelihood coefficient : 1.0 volume mri loglikelihood coefficient : 10.0 normal dot loglikelihood coefficient : 1.0 quadratic curvature loglikelihood coefficient : 1.0 volume resolution : 2 eliminate vertices during search : 1 initial patch selection : 1 select all defect vertices : 0 ordering dependant retessellation: 0 use precomputed edge table : 0 smooth retessellated patch : 2 match retessellated patch : 1 verbose mode : 0 ************************************************************* INFO: assuming .mgz format $Id: mris_fix_topology.c,v 1.50.2.1 2016/10/27 22:25:58 zkaufman Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ before topology correction, eno=-58 (nv=139262, nf=278640, ne=417960, g=30) using quasi-homeomorphic spherical map to tessellate cortical surface... Correction of the Topology Finding true center and radius of Spherical Surface...done Surface centered at (0,0,0) with radius 100.0 in 8 iterations marking ambiguous vertices... 5450 ambiguous faces found in tessellation segmenting defects... 38 defects found, arbitrating ambiguous regions... analyzing neighboring defects... -merging segment 24 into 23 37 defects to be corrected 0 vertices coincident reading input surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.qsphere.nofix... reading brain volume from brain... reading wm segmentation from wm... Computing Initial Surface Statistics -face loglikelihood: -9.5486 (-4.7743) -vertex loglikelihood: -6.4409 (-3.2205) -normal dot loglikelihood: -3.6052 (-3.6052) -quad curv loglikelihood: -6.3110 (-3.1555) Total Loglikelihood : -25.9058 CORRECTING DEFECT 0 (vertices=25, convex hull=81, v0=801) After retessellation of defect 0 (v0=801), euler #=-34 (136041,407012,270937) : difference with theory (-34) = 0 CORRECTING DEFECT 1 (vertices=111, convex hull=101, v0=4125) After retessellation of defect 1 (v0=4125), euler #=-33 (136062,407115,271020) : difference with theory (-33) = 0 CORRECTING DEFECT 2 (vertices=40, convex hull=55, v0=10128) After retessellation of defect 2 (v0=10128), euler #=-32 (136073,407172,271067) : difference with theory (-32) = 0 CORRECTING DEFECT 3 (vertices=31, convex hull=74, v0=10192) After retessellation of defect 3 (v0=10192), euler #=-31 (136084,407230,271115) : difference with theory (-31) = 0 CORRECTING DEFECT 4 (vertices=13, convex hull=36, v0=11521) After retessellation of defect 4 (v0=11521), euler #=-30 (136086,407253,271137) : difference with theory (-30) = 0 CORRECTING DEFECT 5 (vertices=65, convex hull=27, v0=12833) After retessellation of defect 5 (v0=12833), euler #=-29 (136089,407273,271155) : difference with theory (-29) = 0 CORRECTING DEFECT 6 (vertices=63, convex hull=95, v0=23137) After retessellation of defect 6 (v0=23137), euler #=-28 (136123,407420,271269) : difference with theory (-28) = 0 CORRECTING DEFECT 7 (vertices=160, convex hull=64, v0=24339) After retessellation of defect 7 (v0=24339), euler #=-28 (136147,407530,271355) : difference with theory (-27) = 1 CORRECTING DEFECT 8 (vertices=36, convex hull=69, v0=28054) After retessellation of defect 8 (v0=28054), euler #=-27 (136156,407585,271402) : difference with theory (-26) = 1 CORRECTING DEFECT 9 (vertices=21, convex hull=42, v0=31031) After retessellation of defect 9 (v0=31031), euler #=-26 (136168,407637,271443) : difference with theory (-25) = 1 CORRECTING DEFECT 10 (vertices=63, convex hull=61, v0=35459) After retessellation of defect 10 (v0=35459), euler #=-25 (136198,407751,271528) : difference with theory (-24) = 1 CORRECTING DEFECT 11 (vertices=412, convex hull=232, v0=43568) After retessellation of defect 11 (v0=43568), euler #=-24 (136314,408209,271871) : difference with theory (-23) = 1 CORRECTING DEFECT 12 (vertices=21, convex hull=63, v0=46756) After retessellation of defect 12 (v0=46756), euler #=-23 (136326,408270,271921) : difference with theory (-22) = 1 CORRECTING DEFECT 13 (vertices=33, convex hull=32, v0=50126) After retessellation of defect 13 (v0=50126), euler #=-22 (136330,408293,271941) : difference with theory (-21) = 1 CORRECTING DEFECT 14 (vertices=91, convex hull=44, v0=54493) After retessellation of defect 14 (v0=54493), euler #=-21 (136343,408349,271985) : difference with theory (-20) = 1 CORRECTING DEFECT 15 (vertices=150, convex hull=62, v0=56486) After retessellation of defect 15 (v0=56486), euler #=-20 (136357,408417,272040) : difference with theory (-19) = 1 CORRECTING DEFECT 16 (vertices=550, convex hull=291, v0=59599) After retessellation of defect 16 (v0=59599), euler #=-19 (136444,408806,272343) : difference with theory (-18) = 1 CORRECTING DEFECT 17 (vertices=24, convex hull=23, v0=64653) After retessellation of defect 17 (v0=64653), euler #=-18 (136446,408819,272355) : difference with theory (-17) = 1 CORRECTING DEFECT 18 (vertices=21, convex hull=29, v0=65204) After retessellation of defect 18 (v0=65204), euler #=-17 (136448,408835,272370) : difference with theory (-16) = 1 CORRECTING DEFECT 19 (vertices=17, convex hull=54, v0=65331) After retessellation of defect 19 (v0=65331), euler #=-16 (136458,408886,272412) : difference with theory (-15) = 1 CORRECTING DEFECT 20 (vertices=23, convex hull=52, v0=66140) After retessellation of defect 20 (v0=66140), euler #=-15 (136470,408939,272454) : difference with theory (-14) = 1 CORRECTING DEFECT 21 (vertices=36, convex hull=84, v0=75883) After retessellation of defect 21 (v0=75883), euler #=-14 (136488,409028,272526) : difference with theory (-13) = 1 CORRECTING DEFECT 22 (vertices=18, convex hull=61, v0=77573) After retessellation of defect 22 (v0=77573), euler #=-13 (136497,409078,272568) : difference with theory (-12) = 1 CORRECTING DEFECT 23 (vertices=85, convex hull=118, v0=79993) After retessellation of defect 23 (v0=79993), euler #=-11 (136544,409286,272731) : difference with theory (-11) = 0 CORRECTING DEFECT 24 (vertices=8, convex hull=18, v0=81320) After retessellation of defect 24 (v0=81320), euler #=-10 (136545,409294,272739) : difference with theory (-10) = 0 CORRECTING DEFECT 25 (vertices=57, convex hull=33, v0=81774) After retessellation of defect 25 (v0=81774), euler #=-9 (136553,409328,272766) : difference with theory (-9) = 0 CORRECTING DEFECT 26 (vertices=388, convex hull=77, v0=82810) After retessellation of defect 26 (v0=82810), euler #=-8 (136577,409438,272853) : difference with theory (-8) = 0 CORRECTING DEFECT 27 (vertices=292, convex hull=118, v0=87098) After retessellation of defect 27 (v0=87098), euler #=-7 (136635,409670,273028) : difference with theory (-7) = 0 CORRECTING DEFECT 28 (vertices=26, convex hull=63, v0=87221) After retessellation of defect 28 (v0=87221), euler #=-6 (136651,409743,273086) : difference with theory (-6) = 0 CORRECTING DEFECT 29 (vertices=58, convex hull=118, v0=88784) After retessellation of defect 29 (v0=88784), euler #=-5 (136685,409900,273210) : difference with theory (-5) = 0 CORRECTING DEFECT 30 (vertices=5, convex hull=15, v0=91292) After retessellation of defect 30 (v0=91292), euler #=-4 (136685,409906,273217) : difference with theory (-4) = 0 CORRECTING DEFECT 31 (vertices=59, convex hull=71, v0=96525) After retessellation of defect 31 (v0=96525), euler #=-3 (136710,410006,273293) : difference with theory (-3) = 0 CORRECTING DEFECT 32 (vertices=47, convex hull=60, v0=97849) After retessellation of defect 32 (v0=97849), euler #=-2 (136720,410062,273340) : difference with theory (-2) = 0 CORRECTING DEFECT 33 (vertices=23, convex hull=35, v0=100490) After retessellation of defect 33 (v0=100490), euler #=-1 (136724,410088,273363) : difference with theory (-1) = 0 CORRECTING DEFECT 34 (vertices=76, convex hull=52, v0=106712) After retessellation of defect 34 (v0=106712), euler #=0 (136735,410143,273408) : difference with theory (0) = 0 CORRECTING DEFECT 35 (vertices=59, convex hull=76, v0=131370) After retessellation of defect 35 (v0=131370), euler #=1 (136749,410215,273467) : difference with theory (1) = 0 CORRECTING DEFECT 36 (vertices=26, convex hull=74, v0=135044) After retessellation of defect 36 (v0=135044), euler #=2 (136762,410280,273520) : difference with theory (2) = 0 computing original vertex metric properties... storing new metric properties... computing tessellation statistics... vertex spacing 0.88 +- 0.23 (0.04-->10.14) (max @ vno 44201 --> 49131) face area 0.00 +- 0.00 (0.00-->0.00) performing soap bubble on retessellated vertices for 0 iterations... vertex spacing 0.88 +- 0.23 (0.04-->10.14) (max @ vno 44201 --> 49131) face area 0.00 +- 0.00 (0.00-->0.00) tessellation finished, orienting corrected surface... 117 mutations (35.1%), 216 crossovers (64.9%), 136 vertices were eliminated building final representation... 2500 vertices and 0 faces have been removed from triangulation after topology correction, eno=2 (nv=136762, nf=273520, ne=410280, g=0) writing corrected surface to /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.orig... 0.000 % of the vertices (0 vertices) exhibit an orientation change topology fixing took 13.8 minutes 0 defective edges removing intersecting faces 000: 176 intersecting 001: 13 intersecting 002: 2 intersecting mris_fix_topology utimesec 827.181890 mris_fix_topology stimesec 0.139997 mris_fix_topology ru_maxrss 472356 mris_fix_topology ru_ixrss 0 mris_fix_topology ru_idrss 0 mris_fix_topology ru_isrss 0 mris_fix_topology ru_minflt 117060 mris_fix_topology ru_majflt 0 mris_fix_topology ru_nswap 0 mris_fix_topology ru_inblock 0 mris_fix_topology ru_oublock 12912 mris_fix_topology ru_msgsnd 0 mris_fix_topology ru_msgrcv 0 mris_fix_topology ru_nsignals 0 mris_fix_topology ru_nvcsw 1 mris_fix_topology ru_nivcsw 615 FSRUNTIME@ mris_fix_topology rh 0.2298 hours 1 threads mris_euler_number ../surf/lh.orig euler # = v-e+f = 2g-2: 137924 - 413766 + 275844 = 2 --> 0 holes F =2V-4: 275844 = 275848-4 (0) 2E=3F: 827532 = 827532 (0) total defect index = 0 mris_euler_number ../surf/rh.orig euler # = v-e+f = 2g-2: 136762 - 410280 + 273520 = 2 --> 0 holes F =2V-4: 273520 = 273524-4 (0) 2E=3F: 820560 = 820560 (0) total defect index = 0 /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_remove_intersection ../surf/lh.orig ../surf/lh.orig intersection removal took 0.00 hours removing intersecting faces 000: 13 intersecting writing corrected surface to ../surf/lh.orig rm ../surf/lh.inflated /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_remove_intersection ../surf/rh.orig ../surf/rh.orig intersection removal took 0.00 hours removing intersecting faces 000: 35 intersecting 001: 5 intersecting writing corrected surface to ../surf/rh.orig rm ../surf/rh.inflated #-------------------------------------------- #@# Make White Surf lh Thu 17 Nov 2022 05:15:01 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_make_surfaces -aseg ../mri/aseg.presurf -white white.preaparc -noaparc -whiteonly -mgz -T1 brain.finalsurfs sub057 lh using white.preaparc as white matter name... only generating white matter surface using aseg volume ../mri/aseg.presurf to prevent surfaces crossing the midline not using aparc to prevent surfaces crossing the midline INFO: assuming MGZ format for volumes. using brain.finalsurfs as T1 volume... $Id: mris_make_surfaces.c,v 1.164.2.4 2016/12/13 22:26:32 zkaufman Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading volume /home/shenkang/Desktop/T1/RESULTS/sub057/mri/filled.mgz... reading volume /home/shenkang/Desktop/T1/RESULTS/sub057/mri/brain.finalsurfs.mgz... reading volume /home/shenkang/Desktop/T1/RESULTS/sub057/mri/../mri/aseg.presurf.mgz... reading volume /home/shenkang/Desktop/T1/RESULTS/sub057/mri/wm.mgz... 20232 bright wm thresholded. 605 bright non-wm voxels segmented. reading original surface position from /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.orig... computing class statistics... border white: 233197 voxels (1.39%) border gray 296683 voxels (1.77%) WM (98.0): 97.8 +- 9.5 [70.0 --> 110.0] GM (67.0) : 67.2 +- 9.6 [30.0 --> 110.0] setting MIN_GRAY_AT_WHITE_BORDER to 52.4 (was 70) setting MAX_BORDER_WHITE to 113.5 (was 105) setting MIN_BORDER_WHITE to 62.0 (was 85) setting MAX_CSF to 42.7 (was 40) setting MAX_GRAY to 94.5 (was 95) setting MAX_GRAY_AT_CSF_BORDER to 52.4 (was 75) setting MIN_GRAY_AT_CSF_BORDER to 33.1 (was 40) repositioning cortical surface to gray/white boundary smoothing T1 volume with sigma = 2.000 vertex spacing 0.82 +- 0.22 (0.03-->2.88) (max @ vno 20620 --> 20632) face area 0.28 +- 0.12 (0.00-->1.53) mean absolute distance = 0.59 +- 0.67 4463 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... using class modes intead of means, discounting robust sigmas.... intensity peaks found at WM=104+-7.0, GM=62+-7.0 mean inside = 92.6, mean outside = 70.8 smoothing surface for 5 iterations... inhibiting deformation at non-cortical midline structures... mean border=75.6, 62 (62) missing vertices, mean dist 0.3 [0.4 (%34.7)->0.7 (%65.3))] %82 local maxima, %14 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=2.0, host=shenk, nav=4, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 complete_dist_mat 0 rms 0 smooth_averages 0 remove_neg 0 ico_order 0 which_surface 0 target_radius 0.000000 nfields 0 scale 0.000000 desired_rms_height 0.000000 momentum 0.000000 nbhd_size 0 max_nbrs 0 niterations 25 nsurfaces 0 SURFACES 3 flags 0 (0) use curv 0 no sulc 0 no rigid align 0 mris->nsize 2 mris->hemisphere 0 randomSeed 0 smoothing T1 volume with sigma = 1.000 vertex spacing 0.92 +- 0.25 (0.13-->3.82) (max @ vno 91407 --> 90051) face area 0.28 +- 0.13 (0.00-->1.77) mean absolute distance = 0.27 +- 0.39 2706 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... 000: dt: 0.0000, sse=3931209.8, rms=11.257 001: dt: 0.5000, sse=2191725.8, rms=7.887 (29.939%) 002: dt: 0.5000, sse=1548863.5, rms=6.179 (21.653%) 003: dt: 0.5000, sse=1253144.0, rms=5.203 (15.790%) 004: dt: 0.5000, sse=1111608.5, rms=4.656 (10.526%) 005: dt: 0.5000, sse=1047818.2, rms=4.392 (5.670%) 006: dt: 0.5000, sse=1020341.2, rms=4.265 (2.892%) rms = 4.21, time step reduction 1 of 3 to 0.250... 007: dt: 0.5000, sse=1009860.4, rms=4.215 (1.171%) 008: dt: 0.2500, sse=773687.9, rms=2.900 (31.195%) 009: dt: 0.2500, sse=723624.1, rms=2.543 (12.319%) 010: dt: 0.2500, sse=707704.4, rms=2.413 (5.097%) 011: dt: 0.2500, sse=695121.8, rms=2.309 (4.307%) 012: dt: 0.2500, sse=688280.7, rms=2.235 (3.197%) 013: dt: 0.2500, sse=679167.9, rms=2.167 (3.036%) rms = 2.12, time step reduction 2 of 3 to 0.125... 014: dt: 0.2500, sse=674184.6, rms=2.118 (2.301%) 015: dt: 0.1250, sse=663086.4, rms=2.014 (4.907%) rms = 1.99, time step reduction 3 of 3 to 0.062... 016: dt: 0.1250, sse=660932.3, rms=1.990 (1.195%) positioning took 0.7 minutes inhibiting deformation at non-cortical midline structures... removing 1 vertex label from ripped group removing 3 vertex label from ripped group removing 2 vertex label from ripped group mean border=79.4, 83 (14) missing vertices, mean dist -0.2 [0.3 (%79.6)->0.3 (%20.4))] %89 local maxima, % 7 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=1.0, host=shenk, nav=2, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 smoothing T1 volume with sigma = 0.500 vertex spacing 0.91 +- 0.25 (0.07-->4.67) (max @ vno 52026 --> 52044) face area 0.35 +- 0.16 (0.00-->3.82) mean absolute distance = 0.19 +- 0.30 2537 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... 000: dt: 0.0000, sse=1389091.5, rms=5.087 017: dt: 0.5000, sse=991259.1, rms=3.278 (35.563%) rms = 3.78, time step reduction 1 of 3 to 0.250... 018: dt: 0.2500, sse=834693.9, rms=2.219 (32.308%) 019: dt: 0.2500, sse=785644.6, rms=1.746 (21.291%) 020: dt: 0.2500, sse=767733.7, rms=1.535 (12.088%) rms = 1.51, time step reduction 2 of 3 to 0.125... 021: dt: 0.2500, sse=764133.3, rms=1.509 (1.710%) 022: dt: 0.1250, sse=756611.9, rms=1.406 (6.847%) rms = 1.40, time step reduction 3 of 3 to 0.062... 023: dt: 0.1250, sse=756037.2, rms=1.395 (0.743%) positioning took 0.4 minutes inhibiting deformation at non-cortical midline structures... removing 4 vertex label from ripped group removing 4 vertex label from ripped group removing 1 vertex label from ripped group removing 2 vertex label from ripped group removing 3 vertex label from ripped group removing 1 vertex label from ripped group mean border=81.5, 81 (5) missing vertices, mean dist -0.1 [0.2 (%70.7)->0.2 (%29.3))] %92 local maxima, % 4 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=0.5, host=shenk, nav=1, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 smoothing T1 volume with sigma = 0.250 vertex spacing 0.91 +- 0.25 (0.07-->4.19) (max @ vno 49396 --> 50819) face area 0.35 +- 0.16 (0.00-->3.78) mean absolute distance = 0.17 +- 0.28 2933 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... 000: dt: 0.0000, sse=900726.4, rms=2.814 rms = 3.27, time step reduction 1 of 3 to 0.250... 024: dt: 0.2500, sse=777576.8, rms=1.801 (36.011%) 025: dt: 0.2500, sse=738468.4, rms=1.307 (27.413%) rms = 1.29, time step reduction 2 of 3 to 0.125... 026: dt: 0.2500, sse=738658.4, rms=1.289 (1.391%) 027: dt: 0.1250, sse=730437.1, rms=1.204 (6.576%) rms = 1.21, time step reduction 3 of 3 to 0.062... 028: dt: 0.1250, sse=730434.2, rms=1.206 (-0.120%) positioning took 0.3 minutes inhibiting deformation at non-cortical midline structures... removing 3 vertex label from ripped group removing 1 vertex label from ripped group removing 3 vertex label from ripped group removing 4 vertex label from ripped group removing 2 vertex label from ripped group removing 4 vertex label from ripped group mean border=82.1, 85 (2) missing vertices, mean dist -0.0 [0.2 (%55.7)->0.2 (%44.3))] %93 local maxima, % 3 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=0.2, host=shenk, nav=0, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 writing white matter surface to /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white.preaparc... writing smoothed curvature to lh.curv 000: dt: 0.0000, sse=739929.4, rms=1.425 rms = 2.02, time step reduction 1 of 3 to 0.250... 029: dt: 0.2500, sse=711623.4, rms=0.985 (30.830%) 030: dt: 0.2500, sse=706448.3, rms=0.900 (8.702%) rms = 0.92, time step reduction 2 of 3 to 0.125... rms = 0.90, time step reduction 3 of 3 to 0.062... 031: dt: 0.1250, sse=705897.6, rms=0.896 (0.433%) positioning took 0.2 minutes generating cortex label... 7 non-cortical segments detected only using segment with 6832 vertices erasing segment 0 (vno[0] = 30309) erasing segment 2 (vno[0] = 53421) erasing segment 3 (vno[0] = 87270) erasing segment 4 (vno[0] = 88648) erasing segment 5 (vno[0] = 90163) erasing segment 6 (vno[0] = 94058) writing cortex label to /home/shenkang/Desktop/T1/RESULTS/sub057/label/lh.cortex.label... writing curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.curv writing smoothed area to lh.area writing curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.area vertex spacing 0.90 +- 0.25 (0.05-->4.67) (max @ vno 52026 --> 52044) face area 0.34 +- 0.16 (0.00-->3.77) refinement took 2.3 minutes #-------------------------------------------- #@# Make White Surf rh Thu 17 Nov 2022 05:17:18 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_make_surfaces -aseg ../mri/aseg.presurf -white white.preaparc -noaparc -whiteonly -mgz -T1 brain.finalsurfs sub057 rh using white.preaparc as white matter name... only generating white matter surface using aseg volume ../mri/aseg.presurf to prevent surfaces crossing the midline not using aparc to prevent surfaces crossing the midline INFO: assuming MGZ format for volumes. using brain.finalsurfs as T1 volume... $Id: mris_make_surfaces.c,v 1.164.2.4 2016/12/13 22:26:32 zkaufman Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading volume /home/shenkang/Desktop/T1/RESULTS/sub057/mri/filled.mgz... reading volume /home/shenkang/Desktop/T1/RESULTS/sub057/mri/brain.finalsurfs.mgz... reading volume /home/shenkang/Desktop/T1/RESULTS/sub057/mri/../mri/aseg.presurf.mgz... reading volume /home/shenkang/Desktop/T1/RESULTS/sub057/mri/wm.mgz... 20232 bright wm thresholded. 605 bright non-wm voxels segmented. reading original surface position from /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.orig... computing class statistics... border white: 233197 voxels (1.39%) border gray 296683 voxels (1.77%) WM (98.0): 97.8 +- 9.5 [70.0 --> 110.0] GM (67.0) : 67.2 +- 9.6 [30.0 --> 110.0] setting MIN_GRAY_AT_WHITE_BORDER to 54.4 (was 70) setting MAX_BORDER_WHITE to 113.5 (was 105) setting MIN_BORDER_WHITE to 64.0 (was 85) setting MAX_CSF to 44.7 (was 40) setting MAX_GRAY to 94.5 (was 95) setting MAX_GRAY_AT_CSF_BORDER to 54.4 (was 75) setting MIN_GRAY_AT_CSF_BORDER to 35.1 (was 40) repositioning cortical surface to gray/white boundary smoothing T1 volume with sigma = 2.000 vertex spacing 0.82 +- 0.22 (0.02-->4.84) (max @ vno 49185 --> 136289) face area 0.28 +- 0.13 (0.00-->4.78) mean absolute distance = 0.57 +- 0.66 3997 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... using class modes intead of means, discounting robust sigmas.... intensity peaks found at WM=104+-7.0, GM=64+-6.1 mean inside = 92.8, mean outside = 71.3 smoothing surface for 5 iterations... inhibiting deformation at non-cortical midline structures... removing 3 vertex label from ripped group removing 3 vertex label from ripped group mean border=76.8, 71 (71) missing vertices, mean dist 0.3 [0.4 (%36.4)->0.7 (%63.6))] %79 local maxima, %17 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=2.0, host=shenk, nav=4, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 complete_dist_mat 0 rms 0 smooth_averages 0 remove_neg 0 ico_order 0 which_surface 0 target_radius 0.000000 nfields 0 scale 0.000000 desired_rms_height 0.000000 momentum 0.000000 nbhd_size 0 max_nbrs 0 niterations 25 nsurfaces 0 SURFACES 3 flags 0 (0) use curv 0 no sulc 0 no rigid align 0 mris->nsize 2 mris->hemisphere 1 randomSeed 0 smoothing T1 volume with sigma = 1.000 vertex spacing 0.92 +- 0.26 (0.12-->4.80) (max @ vno 49131 --> 50344) face area 0.28 +- 0.13 (0.00-->3.07) mean absolute distance = 0.27 +- 0.44 2107 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... 000: dt: 0.0000, sse=3566524.8, rms=10.666 001: dt: 0.5000, sse=1955821.8, rms=7.343 (31.150%) 002: dt: 0.5000, sse=1408308.2, rms=5.770 (21.430%) 003: dt: 0.5000, sse=1168468.9, rms=4.922 (14.700%) 004: dt: 0.5000, sse=1056646.9, rms=4.469 (9.204%) 005: dt: 0.5000, sse=1004223.6, rms=4.225 (5.444%) 006: dt: 0.5000, sse=977559.9, rms=4.103 (2.885%) 007: dt: 0.5000, sse=964213.2, rms=4.040 (1.548%) rms = 4.00, time step reduction 1 of 3 to 0.250... 008: dt: 0.5000, sse=956473.9, rms=3.995 (1.107%) 009: dt: 0.2500, sse=725813.2, rms=2.604 (34.821%) 010: dt: 0.2500, sse=680192.0, rms=2.220 (14.759%) 011: dt: 0.2500, sse=667215.0, rms=2.109 (4.973%) 012: dt: 0.2500, sse=658828.2, rms=2.026 (3.939%) rms = 1.98, time step reduction 2 of 3 to 0.125... 013: dt: 0.2500, sse=655152.7, rms=1.984 (2.092%) 014: dt: 0.1250, sse=641856.7, rms=1.851 (6.700%) rms = 1.83, time step reduction 3 of 3 to 0.062... 015: dt: 0.1250, sse=639530.6, rms=1.828 (1.225%) positioning took 0.7 minutes inhibiting deformation at non-cortical midline structures... removing 3 vertex label from ripped group removing 2 vertex label from ripped group removing 3 vertex label from ripped group mean border=80.2, 88 (16) missing vertices, mean dist -0.1 [0.3 (%77.4)->0.3 (%22.6))] %87 local maxima, % 9 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=1.0, host=shenk, nav=2, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 smoothing T1 volume with sigma = 0.500 vertex spacing 0.91 +- 0.25 (0.05-->5.43) (max @ vno 45420 --> 45437) face area 0.35 +- 0.16 (0.00-->4.28) mean absolute distance = 0.19 +- 0.33 2408 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... 000: dt: 0.0000, sse=1261165.4, rms=4.649 016: dt: 0.5000, sse=967679.6, rms=3.225 (30.631%) rms = 3.75, time step reduction 1 of 3 to 0.250... 017: dt: 0.2500, sse=820740.4, rms=2.189 (32.109%) 018: dt: 0.2500, sse=782465.0, rms=1.781 (18.658%) 019: dt: 0.2500, sse=761686.1, rms=1.593 (10.566%) rms = 1.57, time step reduction 2 of 3 to 0.125... 020: dt: 0.2500, sse=758794.4, rms=1.574 (1.181%) 021: dt: 0.1250, sse=756408.7, rms=1.482 (5.813%) rms = 1.47, time step reduction 3 of 3 to 0.062... 022: dt: 0.1250, sse=751165.7, rms=1.475 (0.531%) positioning took 0.4 minutes inhibiting deformation at non-cortical midline structures... removing 4 vertex label from ripped group removing 2 vertex label from ripped group removing 2 vertex label from ripped group removing 4 vertex label from ripped group removing 4 vertex label from ripped group mean border=82.1, 103 (12) missing vertices, mean dist -0.1 [0.2 (%69.2)->0.2 (%30.8))] %90 local maxima, % 6 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=0.5, host=shenk, nav=1, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 smoothing T1 volume with sigma = 0.250 vertex spacing 0.91 +- 0.25 (0.06-->5.65) (max @ vno 45420 --> 45437) face area 0.34 +- 0.16 (0.00-->4.43) mean absolute distance = 0.18 +- 0.29 2529 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... 000: dt: 0.0000, sse=874963.1, rms=2.688 rms = 3.15, time step reduction 1 of 3 to 0.250... 023: dt: 0.2500, sse=767761.9, rms=1.759 (34.580%) 024: dt: 0.2500, sse=736663.4, rms=1.349 (23.277%) rms = 1.34, time step reduction 2 of 3 to 0.125... 025: dt: 0.2500, sse=733622.8, rms=1.336 (0.987%) 026: dt: 0.1250, sse=733368.6, rms=1.261 (5.585%) rms = 1.26, time step reduction 3 of 3 to 0.062... 027: dt: 0.1250, sse=728117.1, rms=1.262 (-0.060%) positioning took 0.3 minutes inhibiting deformation at non-cortical midline structures... removing 4 vertex label from ripped group removing 2 vertex label from ripped group removing 2 vertex label from ripped group removing 4 vertex label from ripped group mean border=82.7, 121 (8) missing vertices, mean dist -0.0 [0.2 (%55.2)->0.2 (%44.8))] %91 local maxima, % 5 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=0.2, host=shenk, nav=0, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 writing white matter surface to /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white.preaparc... writing smoothed curvature to rh.curv 000: dt: 0.0000, sse=740509.7, rms=1.438 rms = 1.97, time step reduction 1 of 3 to 0.250... 028: dt: 0.2500, sse=708877.9, rms=1.028 (28.492%) 029: dt: 0.2500, sse=730374.4, rms=0.934 (9.103%) rms = 0.95, time step reduction 2 of 3 to 0.125... rms = 0.93, time step reduction 3 of 3 to 0.062... 030: dt: 0.1250, sse=710200.4, rms=0.932 (0.297%) positioning took 0.2 minutes generating cortex label... 16 non-cortical segments detected only using segment with 6891 vertices erasing segment 0 (vno[0] = 35495) erasing segment 1 (vno[0] = 39616) erasing segment 3 (vno[0] = 69594) erasing segment 4 (vno[0] = 69596) erasing segment 5 (vno[0] = 74022) erasing segment 6 (vno[0] = 82025) erasing segment 7 (vno[0] = 84875) erasing segment 8 (vno[0] = 86243) erasing segment 9 (vno[0] = 87568) erasing segment 10 (vno[0] = 87580) erasing segment 11 (vno[0] = 92589) erasing segment 12 (vno[0] = 92639) erasing segment 13 (vno[0] = 94863) erasing segment 14 (vno[0] = 96119) erasing segment 15 (vno[0] = 101636) writing cortex label to /home/shenkang/Desktop/T1/RESULTS/sub057/label/rh.cortex.label... writing curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.curv writing smoothed area to rh.area writing curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.area vertex spacing 0.90 +- 0.25 (0.02-->5.75) (max @ vno 45420 --> 45437) face area 0.34 +- 0.16 (0.00-->4.63) refinement took 2.2 minutes #-------------------------------------------- #@# Smooth2 lh Thu 17 Nov 2022 05:19:29 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_smooth -n 3 -nw -seed 1234 ../surf/lh.white.preaparc ../surf/lh.smoothwm smoothing for 3 iterations setting seed for random number generator to 1234 smoothing surface tessellation for 3 iterations... smoothing complete - recomputing first and second fundamental forms... #-------------------------------------------- #@# Smooth2 rh Thu 17 Nov 2022 05:19:32 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_smooth -n 3 -nw -seed 1234 ../surf/rh.white.preaparc ../surf/rh.smoothwm smoothing for 3 iterations setting seed for random number generator to 1234 smoothing surface tessellation for 3 iterations... smoothing complete - recomputing first and second fundamental forms... #-------------------------------------------- #@# Inflation2 lh Thu 17 Nov 2022 05:19:34 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_inflate -rusage /home/shenkang/Desktop/T1/RESULTS/sub057/touch/rusage.mris_inflate.lh.dat ../surf/lh.smoothwm ../surf/lh.inflated Reading ../surf/lh.smoothwm avg radius = 44.4 mm, total surface area = 85439 mm^2 writing inflated surface to ../surf/lh.inflated writing sulcal depths to ../surf/lh.sulc step 000: RMS=0.183 (target=0.015) step 005: RMS=0.126 (target=0.015) step 010: RMS=0.095 (target=0.015) step 015: RMS=0.080 (target=0.015) step 020: RMS=0.067 (target=0.015) step 025: RMS=0.057 (target=0.015) step 030: RMS=0.047 (target=0.015) step 035: RMS=0.039 (target=0.015) step 040: RMS=0.034 (target=0.015) step 045: RMS=0.030 (target=0.015) step 050: RMS=0.027 (target=0.015) step 055: RMS=0.025 (target=0.015) step 060: RMS=0.023 (target=0.015) inflation complete. inflation took 0.3 minutes mris_inflate utimesec 18.626010 mris_inflate stimesec 0.051994 mris_inflate ru_maxrss 181652 mris_inflate ru_ixrss 0 mris_inflate ru_idrss 0 mris_inflate ru_isrss 0 mris_inflate ru_minflt 43751 mris_inflate ru_majflt 0 mris_inflate ru_nswap 0 mris_inflate ru_inblock 0 mris_inflate ru_oublock 10784 mris_inflate ru_msgsnd 0 mris_inflate ru_msgrcv 0 mris_inflate ru_nsignals 0 mris_inflate ru_nvcsw 0 mris_inflate ru_nivcsw 23 #-------------------------------------------- #@# Inflation2 rh Thu 17 Nov 2022 05:19:53 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_inflate -rusage /home/shenkang/Desktop/T1/RESULTS/sub057/touch/rusage.mris_inflate.rh.dat ../surf/rh.smoothwm ../surf/rh.inflated Reading ../surf/rh.smoothwm avg radius = 43.7 mm, total surface area = 84639 mm^2 writing inflated surface to ../surf/rh.inflated writing sulcal depths to ../surf/rh.sulc step 000: RMS=0.186 (target=0.015) step 005: RMS=0.129 (target=0.015) step 010: RMS=0.098 (target=0.015) step 015: RMS=0.083 (target=0.015) step 020: RMS=0.070 (target=0.015) step 025: RMS=0.059 (target=0.015) step 030: RMS=0.048 (target=0.015) step 035: RMS=0.041 (target=0.015) step 040: RMS=0.035 (target=0.015) step 045: RMS=0.032 (target=0.015) step 050: RMS=0.028 (target=0.015) step 055: RMS=0.026 (target=0.015) step 060: RMS=0.024 (target=0.015) inflation complete. inflation took 0.4 minutes mris_inflate utimesec 23.073517 mris_inflate stimesec 0.055993 mris_inflate ru_maxrss 180352 mris_inflate ru_ixrss 0 mris_inflate ru_idrss 0 mris_inflate ru_isrss 0 mris_inflate ru_minflt 43404 mris_inflate ru_majflt 0 mris_inflate ru_nswap 0 mris_inflate ru_inblock 0 mris_inflate ru_oublock 10696 mris_inflate ru_msgsnd 0 mris_inflate ru_msgrcv 0 mris_inflate ru_nsignals 0 mris_inflate ru_nvcsw 0 mris_inflate ru_nivcsw 22 #-------------------------------------------- #@# Curv .H and .K lh Thu 17 Nov 2022 05:20:16 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/surf mris_curvature -w lh.white.preaparc total integrated curvature = 5.647*4pi (70.959) --> -5 handles ICI = 163.0, FI = 2034.2, variation=30826.209 writing Gaussian curvature to ./lh.white.preaparc.K...done. writing mean curvature to ./lh.white.preaparc.H...done. rm -f lh.white.H ln -s lh.white.preaparc.H lh.white.H rm -f lh.white.K ln -s lh.white.preaparc.K lh.white.K mris_curvature -thresh .999 -n -a 5 -w -distances 10 10 lh.inflated normalizing curvature values. averaging curvature patterns 5 times. sampling 10 neighbors out to a distance of 10 mm 151 vertices thresholded to be in k1 ~ [-0.25 0.23], k2 ~ [-0.11 0.08] total integrated curvature = 0.527*4pi (6.616) --> 0 handles ICI = 1.5, FI = 9.7, variation=165.106 125 vertices thresholded to be in [-0.01 0.02] writing Gaussian curvature to ./lh.inflated.K...thresholding curvature at 99.90% level curvature mean = 0.000, std = 0.001 150 vertices thresholded to be in [-0.16 0.09] done. writing mean curvature to ./lh.inflated.H...curvature mean = -0.017, std = 0.022 done. #-------------------------------------------- #@# Curv .H and .K rh Thu 17 Nov 2022 05:21:00 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/surf mris_curvature -w rh.white.preaparc total integrated curvature = 5.834*4pi (73.315) --> -5 handles ICI = 168.7, FI = 2008.4, variation=30723.015 writing Gaussian curvature to ./rh.white.preaparc.K...done. writing mean curvature to ./rh.white.preaparc.H...done. rm -f rh.white.H ln -s rh.white.preaparc.H rh.white.H rm -f rh.white.K ln -s rh.white.preaparc.K rh.white.K mris_curvature -thresh .999 -n -a 5 -w -distances 10 10 rh.inflated normalizing curvature values. averaging curvature patterns 5 times. sampling 10 neighbors out to a distance of 10 mm 175 vertices thresholded to be in k1 ~ [-0.19 0.42], k2 ~ [-0.09 0.05] total integrated curvature = 0.550*4pi (6.913) --> 0 handles ICI = 1.5, FI = 9.1, variation=156.988 97 vertices thresholded to be in [-0.01 0.01] writing Gaussian curvature to ./rh.inflated.K...thresholding curvature at 99.90% level curvature mean = 0.000, std = 0.001 137 vertices thresholded to be in [-0.11 0.15] done. writing mean curvature to ./rh.inflated.H...curvature mean = -0.017, std = 0.022 done. #----------------------------------------- #@# Curvature Stats lh Thu 17 Nov 2022 05:21:42 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/surf mris_curvature_stats -m --writeCurvatureFiles -G -o ../stats/lh.curv.stats -F smoothwm sub057 lh curv sulc Toggling save flag on curvature files [ ok ] Outputting results using filestem [ ../stats/lh.curv.stats ] Toggling save flag on curvature files [ ok ] Setting surface [ sub057/lh.smoothwm ] Reading surface... [ ok ] Setting texture [ curv ] Reading texture... [ ok ] Setting texture [ sulc ] Reading texture...Gb_filter = 0 [ ok ] Calculating Discrete Principal Curvatures... Determining geometric order for vertex faces... [####################] [ ok ] Determining KH curvatures... [####################] [ ok ] Determining k1k2 curvatures... [####################] [ ok ] deltaViolations [ 258 ] Gb_filter = 0 WARN: S lookup min: -2.120241 WARN: S explicit min: 0.000000 vertex = 773 WARN: C lookup max: 142.921570 WARN: C explicit max: 130.202698 vertex = 82077 #----------------------------------------- #@# Curvature Stats rh Thu 17 Nov 2022 05:21:44 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/surf mris_curvature_stats -m --writeCurvatureFiles -G -o ../stats/rh.curv.stats -F smoothwm sub057 rh curv sulc Toggling save flag on curvature files [ ok ] Outputting results using filestem [ ../stats/rh.curv.stats ] Toggling save flag on curvature files [ ok ] Setting surface [ sub057/rh.smoothwm ] Reading surface... [ ok ] Setting texture [ curv ] Reading texture... [ ok ] Setting texture [ sulc ] Reading texture...Gb_filter = 0 [ ok ] Calculating Discrete Principal Curvatures... Determining geometric order for vertex faces... [####################] [ ok ] Determining KH curvatures... [####################] [ ok ] Determining k1k2 curvatures... [####################] [ ok ] deltaViolations [ 231 ] Gb_filter = 0 WARN: S lookup min: -0.619137 WARN: S explicit min: 0.000000 vertex = 93 #-------------------------------------------- #@# Sphere lh Thu 17 Nov 2022 05:21:46 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_sphere -rusage /home/shenkang/Desktop/T1/RESULTS/sub057/touch/rusage.mris_sphere.lh.dat -seed 1234 ../surf/lh.inflated ../surf/lh.sphere setting seed for random number genererator to 1234 $Id: mris_sphere.c,v 1.61 2016/01/20 23:42:15 greve Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading original vertex positions... unfolding cortex into spherical form... surface projected - minimizing metric distortion... == Number of threads available to mris_sphere for OpenMP = 1 == scaling brain by 0.309... MRISunfold() max_passes = 1 ------- tol=5.0e-01, sigma=0.0, host=shenk, nav=1024, nbrs=2, l_area=1.000, l_dist=1.000 using quadratic fit line minimization complete_dist_mat 0 rms 0 smooth_averages 0 remove_neg 0 ico_order 0 which_surface 0 target_radius 0.000000 nfields 0 scale 1.000000 desired_rms_height -1.000000 momentum 0.900000 nbhd_size 7 max_nbrs 8 niterations 25 nsurfaces 0 SURFACES 3 flags 0 (0) use curv 0 no sulc 0 no rigid align 0 mris->nsize 2 mris->hemisphere 0 randomSeed 1234 -------------------- mrisRemoveNegativeArea() pass 1: epoch 1 of 3 starting distance error %20.41 pass 1: epoch 2 of 3 starting distance error %20.42 unfolding complete - removing small folds... starting distance error %20.36 removing remaining folds... final distance error %20.39 MRISunfold() return, current seed 1234 -01: dt=0.0000, 127 negative triangles 183: dt=0.9900, 127 negative triangles 184: dt=0.9900, 58 negative triangles 185: dt=0.9900, 35 negative triangles 186: dt=0.9900, 26 negative triangles 187: dt=0.9900, 19 negative triangles 188: dt=0.9900, 15 negative triangles 189: dt=0.9900, 17 negative triangles 190: dt=0.9900, 12 negative triangles 191: dt=0.9900, 4 negative triangles 192: dt=0.9900, 9 negative triangles 193: dt=0.9900, 4 negative triangles 194: dt=0.9900, 7 negative triangles 195: dt=0.9900, 1 negative triangles 196: dt=0.9900, 2 negative triangles writing spherical brain to ../surf/lh.sphere spherical transformation took 0.48 hours mris_sphere utimesec 1712.227745 mris_sphere stimesec 0.247998 mris_sphere ru_maxrss 248356 mris_sphere ru_ixrss 0 mris_sphere ru_idrss 0 mris_sphere ru_isrss 0 mris_sphere ru_minflt 60366 mris_sphere ru_majflt 0 mris_sphere ru_nswap 0 mris_sphere ru_inblock 0 mris_sphere ru_oublock 9704 mris_sphere ru_msgsnd 0 mris_sphere ru_msgrcv 0 mris_sphere ru_nsignals 0 mris_sphere ru_nvcsw 0 mris_sphere ru_nivcsw 2016 FSRUNTIME@ mris_sphere 0.4757 hours 1 threads #-------------------------------------------- #@# Sphere rh Thu 17 Nov 2022 05:50:18 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_sphere -rusage /home/shenkang/Desktop/T1/RESULTS/sub057/touch/rusage.mris_sphere.rh.dat -seed 1234 ../surf/rh.inflated ../surf/rh.sphere setting seed for random number genererator to 1234 $Id: mris_sphere.c,v 1.61 2016/01/20 23:42:15 greve Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading original vertex positions... unfolding cortex into spherical form... surface projected - minimizing metric distortion... == Number of threads available to mris_sphere for OpenMP = 1 == scaling brain by 0.319... MRISunfold() max_passes = 1 ------- tol=5.0e-01, sigma=0.0, host=shenk, nav=1024, nbrs=2, l_area=1.000, l_dist=1.000 using quadratic fit line minimization complete_dist_mat 0 rms 0 smooth_averages 0 remove_neg 0 ico_order 0 which_surface 0 target_radius 0.000000 nfields 0 scale 1.000000 desired_rms_height -1.000000 momentum 0.900000 nbhd_size 7 max_nbrs 8 niterations 25 nsurfaces 0 SURFACES 3 flags 0 (0) use curv 0 no sulc 0 no rigid align 0 mris->nsize 2 mris->hemisphere 1 randomSeed 1234 singular matrix in quadratic form -------------------- mrisRemoveNegativeArea() pass 1: epoch 1 of 3 starting distance error %20.47 pass 1: epoch 2 of 3 starting distance error %20.47 unfolding complete - removing small folds... starting distance error %20.42 removing remaining folds... final distance error %20.45 MRISunfold() return, current seed 1234 -01: dt=0.0000, 208 negative triangles 208: dt=0.9900, 208 negative triangles 209: dt=0.9900, 94 negative triangles 210: dt=0.9900, 57 negative triangles 211: dt=0.9900, 52 negative triangles 212: dt=0.9900, 41 negative triangles 213: dt=0.9900, 52 negative triangles 214: dt=0.9900, 45 negative triangles 215: dt=0.9900, 45 negative triangles 216: dt=0.9900, 38 negative triangles 217: dt=0.9900, 40 negative triangles 218: dt=0.9900, 33 negative triangles 219: dt=0.9900, 35 negative triangles 220: dt=0.9900, 37 negative triangles 221: dt=0.9900, 29 negative triangles 222: dt=0.9900, 18 negative triangles 223: dt=0.9900, 18 negative triangles 224: dt=0.9900, 13 negative triangles 225: dt=0.9900, 13 negative triangles 226: dt=0.9900, 10 negative triangles 227: dt=0.9900, 7 negative triangles 228: dt=0.9900, 8 negative triangles 229: dt=0.9900, 7 negative triangles 230: dt=0.9900, 5 negative triangles 231: dt=0.9900, 3 negative triangles 232: dt=0.9900, 3 negative triangles 233: dt=0.9900, 3 negative triangles 234: dt=0.9900, 2 negative triangles 235: dt=0.9900, 3 negative triangles 236: dt=0.9900, 1 negative triangles writing spherical brain to ../surf/rh.sphere spherical transformation took 0.60 hours mris_sphere utimesec 2158.013878 mris_sphere stimesec 0.243985 mris_sphere ru_maxrss 246268 mris_sphere ru_ixrss 0 mris_sphere ru_idrss 0 mris_sphere ru_isrss 0 mris_sphere ru_minflt 59870 mris_sphere ru_majflt 0 mris_sphere ru_nswap 0 mris_sphere ru_inblock 0 mris_sphere ru_oublock 9624 mris_sphere ru_msgsnd 0 mris_sphere ru_msgrcv 0 mris_sphere ru_nsignals 0 mris_sphere ru_nvcsw 0 mris_sphere ru_nivcsw 6295 FSRUNTIME@ mris_sphere 0.5996 hours 1 threads #-------------------------------------------- #@# Surf Reg lh Thu 17 Nov 2022 06:26:17 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_register -curv -rusage /home/shenkang/Desktop/T1/RESULTS/sub057/touch/rusage.mris_register.lh.dat ../surf/lh.sphere /opt/freesurfer/average/lh.folding.atlas.acfb40.noaparc.i12.2016-08-02.tif ../surf/lh.sphere.reg using smoothwm curvature for final alignment cwd /home/shenkang/Desktop/T1/RESULTS/sub057/scripts cmdline mris_register -curv -rusage /home/shenkang/Desktop/T1/RESULTS/sub057/touch/rusage.mris_register.lh.dat ../surf/lh.sphere /opt/freesurfer/average/lh.folding.atlas.acfb40.noaparc.i12.2016-08-02.tif ../surf/lh.sphere.reg 0 inflated.H 1 sulc 2 smoothwm (computed) $Id: mris_register.c,v 1.63 2016/01/20 23:43:04 greve Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading surface from ../surf/lh.sphere... reading template parameterization from /opt/freesurfer/average/lh.folding.atlas.acfb40.noaparc.i12.2016-08-02.tif... MRISregister() ------- max_passes = 4 min_degrees = 0.500000 max_degrees = 64.000000 nangles = 8 tol=5.0e-01, sigma=0.0, host=shenk, nav=1024, nbrs=1, l_extern=10000.000, l_parea=0.200, l_nlarea=1.000, l_corr=1.000, l_dist=5.000 using quadratic fit line minimization complete_dist_mat 0 rms 0 smooth_averages 0 remove_neg 0 ico_order 0 which_surface 0 target_radius 0.000000 nfields 0 scale 0.000000 desired_rms_height -1.000000 momentum 0.950000 nbhd_size -10 max_nbrs 10 niterations 25 nsurfaces 0 SURFACES 3 flags 16 (10) use curv 16 no sulc 0 no rigid align 0 mris->nsize 1 mris->hemisphere 0 randomSeed 0 tol=5.0e-01, sigma=0.0, host=shenk, nav=1024, nbrs=1, l_extern=10000.000, l_parea=0.200, l_nlarea=1.000, l_corr=1.000, l_dist=5.000 using quadratic fit line minimization -------------------- 1 Reading lh.sulc curvature mean = 0.000, std = 5.833 curvature mean = 0.032, std = 0.811 curvature mean = 0.016, std = 0.865 Starting MRISrigidBodyAlignGlobal() d=64.00 min @ (0.00, 0.00, 32.00) sse = 333781.6, tmin=0.7669 d=32.00 min @ (0.00, -8.00, -8.00) sse = 259508.0, tmin=1.5105 d=16.00 min @ (0.00, 0.00, 4.00) sse = 240657.1, tmin=2.3106 d=4.00 min @ (0.00, 1.00, -1.00) sse = 239091.2, tmin=3.8977 d=2.00 min @ (0.00, 0.00, 0.50) sse = 238887.5, tmin=4.5917 d=1.00 min @ (0.25, 0.00, -0.25) sse = 238870.1, tmin=5.3414 d=0.50 min @ (-0.12, -0.12, 0.12) sse = 238837.0, tmin=6.1330 tol=1.0e+00, sigma=0.5, host=shenk, nav=1024, nbrs=1, l_extern=10000.000, l_parea=0.200, l_nlarea=1.000, l_corr=0.050, l_spring=0.500, l_dist=5.000 using quadratic fit line minimization MRISrigidBodyAlignGlobal() done 6.13 min curvature mean = 0.008, std = 0.840 curvature mean = 0.006, std = 0.947 curvature mean = 0.007, std = 0.852 curvature mean = 0.003, std = 0.978 curvature mean = 0.006, std = 0.855 curvature mean = 0.001, std = 0.991 2 Reading smoothwm curvature mean = -0.029, std = 0.336 curvature mean = 0.042, std = 0.250 curvature mean = 0.066, std = 0.295 curvature mean = 0.036, std = 0.310 curvature mean = 0.038, std = 0.464 curvature mean = 0.035, std = 0.336 curvature mean = 0.022, std = 0.596 curvature mean = 0.035, std = 0.348 curvature mean = 0.008, std = 0.707 MRISregister() return, current seed 0 -01: dt=0.0000, 39 negative triangles 122: dt=0.9900, 39 negative triangles expanding nbhd size to 1 123: dt=0.9900, 46 negative triangles 124: dt=0.9900, 31 negative triangles 125: dt=0.9900, 25 negative triangles 126: dt=0.9900, 25 negative triangles 127: dt=0.9900, 24 negative triangles 128: dt=0.9900, 28 negative triangles 129: dt=0.9900, 24 negative triangles 130: dt=0.9900, 17 negative triangles 131: dt=0.9900, 17 negative triangles 132: dt=0.9900, 14 negative triangles 133: dt=0.9900, 14 negative triangles 134: dt=0.9900, 14 negative triangles 135: dt=0.9900, 13 negative triangles 136: dt=0.9900, 12 negative triangles 137: dt=0.9900, 12 negative triangles 138: dt=0.9900, 10 negative triangles 139: dt=0.9900, 11 negative triangles 140: dt=0.9900, 9 negative triangles 141: dt=0.9900, 8 negative triangles 142: dt=0.9900, 10 negative triangles 143: dt=0.9900, 9 negative triangles 144: dt=0.9900, 8 negative triangles 145: dt=0.9900, 8 negative triangles 146: dt=0.9900, 9 negative triangles 147: dt=0.9900, 10 negative triangles 148: dt=0.9900, 8 negative triangles 149: dt=0.9900, 8 negative triangles 150: dt=0.9900, 10 negative triangles 151: dt=0.9900, 6 negative triangles 152: dt=0.9900, 7 negative triangles 153: dt=0.9900, 5 negative triangles 154: dt=0.9900, 5 negative triangles 155: dt=0.9900, 4 negative triangles 156: dt=0.9900, 5 negative triangles 157: dt=0.9900, 3 negative triangles 158: dt=0.9900, 3 negative triangles 159: dt=0.9900, 2 negative triangles 160: dt=0.9900, 3 negative triangles 161: dt=0.9900, 2 negative triangles 162: dt=0.9900, 2 negative triangles 163: dt=0.9900, 2 negative triangles 164: dt=0.9900, 2 negative triangles 165: dt=0.9900, 4 negative triangles writing registered surface to ../surf/lh.sphere.reg... registration took 0.96 hours mris_register utimesec 3454.102327 mris_register stimesec 0.479980 mris_register ru_maxrss 234300 mris_register ru_ixrss 0 mris_register ru_idrss 0 mris_register ru_isrss 0 mris_register ru_minflt 56757 mris_register ru_majflt 0 mris_register ru_nswap 0 mris_register ru_inblock 8 mris_register ru_oublock 9712 mris_register ru_msgsnd 0 mris_register ru_msgrcv 0 mris_register ru_nsignals 0 mris_register ru_nvcsw 1 mris_register ru_nivcsw 7081 FSRUNTIME@ mris_register 0.9597 hours 1 threads #-------------------------------------------- #@# Surf Reg rh Thu 17 Nov 2022 07:23:51 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_register -curv -rusage /home/shenkang/Desktop/T1/RESULTS/sub057/touch/rusage.mris_register.rh.dat ../surf/rh.sphere /opt/freesurfer/average/rh.folding.atlas.acfb40.noaparc.i12.2016-08-02.tif ../surf/rh.sphere.reg using smoothwm curvature for final alignment cwd /home/shenkang/Desktop/T1/RESULTS/sub057/scripts cmdline mris_register -curv -rusage /home/shenkang/Desktop/T1/RESULTS/sub057/touch/rusage.mris_register.rh.dat ../surf/rh.sphere /opt/freesurfer/average/rh.folding.atlas.acfb40.noaparc.i12.2016-08-02.tif ../surf/rh.sphere.reg 0 inflated.H 1 sulc 2 smoothwm (computed) $Id: mris_register.c,v 1.63 2016/01/20 23:43:04 greve Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading surface from ../surf/rh.sphere... reading template parameterization from /opt/freesurfer/average/rh.folding.atlas.acfb40.noaparc.i12.2016-08-02.tif... MRISregister() ------- max_passes = 4 min_degrees = 0.500000 max_degrees = 64.000000 nangles = 8 tol=5.0e-01, sigma=0.0, host=shenk, nav=1024, nbrs=1, l_extern=10000.000, l_parea=0.200, l_nlarea=1.000, l_corr=1.000, l_dist=5.000 using quadratic fit line minimization complete_dist_mat 0 rms 0 smooth_averages 0 remove_neg 0 ico_order 0 which_surface 0 target_radius 0.000000 nfields 0 scale 0.000000 desired_rms_height -1.000000 momentum 0.950000 nbhd_size -10 max_nbrs 10 niterations 25 nsurfaces 0 SURFACES 3 flags 16 (10) use curv 16 no sulc 0 no rigid align 0 mris->nsize 1 mris->hemisphere 1 randomSeed 0 tol=5.0e-01, sigma=0.0, host=shenk, nav=1024, nbrs=1, l_extern=10000.000, l_parea=0.200, l_nlarea=1.000, l_corr=1.000, l_dist=5.000 using quadratic fit line minimization -------------------- 1 Reading rh.sulc curvature mean = -0.000, std = 5.819 curvature mean = 0.041, std = 0.809 curvature mean = 0.016, std = 0.865 Starting MRISrigidBodyAlignGlobal() d=64.00 min @ (16.00, 0.00, 32.00) sse = 360612.7, tmin=0.8588 d=32.00 min @ (-8.00, -8.00, 0.00) sse = 291522.1, tmin=1.6765 d=16.00 min @ (4.00, 0.00, 4.00) sse = 275763.2, tmin=2.4691 d=8.00 min @ (-2.00, 0.00, -2.00) sse = 274418.5, tmin=3.3361 d=4.00 min @ (1.00, -1.00, 1.00) sse = 271643.9, tmin=4.2536 d=2.00 min @ (-0.50, 0.00, 0.00) sse = 271564.0, tmin=5.0944 d=1.00 min @ (0.25, 0.00, -0.25) sse = 271424.4, tmin=5.9617 d=0.50 min @ (0.00, 0.12, 0.00) sse = 271406.4, tmin=6.6650 tol=1.0e+00, sigma=0.5, host=shenk, nav=1024, nbrs=1, l_extern=10000.000, l_parea=0.200, l_nlarea=1.000, l_corr=0.050, l_spring=0.500, l_dist=5.000 using quadratic fit line minimization MRISrigidBodyAlignGlobal() done 6.67 min curvature mean = 0.011, std = 0.824 curvature mean = 0.006, std = 0.947 curvature mean = 0.007, std = 0.835 curvature mean = 0.002, std = 0.977 curvature mean = 0.005, std = 0.836 curvature mean = 0.000, std = 0.990 2 Reading smoothwm curvature mean = -0.028, std = 0.336 curvature mean = 0.037, std = 0.244 curvature mean = 0.068, std = 0.298 curvature mean = 0.031, std = 0.302 curvature mean = 0.043, std = 0.461 curvature mean = 0.030, std = 0.329 curvature mean = 0.023, std = 0.597 curvature mean = 0.030, std = 0.340 curvature mean = 0.008, std = 0.714 MRISregister() return, current seed 0 -01: dt=0.0000, 50 negative triangles 123: dt=0.9900, 50 negative triangles expanding nbhd size to 1 124: dt=0.9900, 70 negative triangles 125: dt=0.9900, 49 negative triangles 126: dt=0.9900, 47 negative triangles 127: dt=0.9900, 44 negative triangles 128: dt=0.9900, 41 negative triangles 129: dt=0.9900, 42 negative triangles 130: dt=0.9900, 35 negative triangles 131: dt=0.9900, 34 negative triangles 132: dt=0.9900, 28 negative triangles 133: dt=0.9900, 31 negative triangles 134: dt=0.9900, 24 negative triangles 135: dt=0.9900, 24 negative triangles 136: dt=0.9900, 22 negative triangles 137: dt=0.9900, 16 negative triangles 138: dt=0.9900, 14 negative triangles 139: dt=0.9900, 12 negative triangles 140: dt=0.9900, 11 negative triangles 141: dt=0.9900, 11 negative triangles 142: dt=0.9900, 11 negative triangles 143: dt=0.9900, 10 negative triangles 144: dt=0.9900, 10 negative triangles 145: dt=0.9900, 8 negative triangles 146: dt=0.9900, 10 negative triangles 147: dt=0.9900, 8 negative triangles 148: dt=0.9900, 6 negative triangles 149: dt=0.9900, 5 negative triangles 150: dt=0.9900, 6 negative triangles 151: dt=0.9900, 5 negative triangles 152: dt=0.9900, 5 negative triangles 153: dt=0.9900, 5 negative triangles 154: dt=0.9900, 6 negative triangles 155: dt=0.9900, 5 negative triangles 156: dt=0.9900, 5 negative triangles 157: dt=0.9900, 5 negative triangles 158: dt=0.9900, 4 negative triangles 159: dt=0.9900, 4 negative triangles 160: dt=0.9900, 2 negative triangles 161: dt=0.9900, 1 negative triangles 162: dt=0.9900, 1 negative triangles 163: dt=0.9900, 3 negative triangles 164: dt=0.9900, 1 negative triangles 165: dt=0.9900, 1 negative triangles writing registered surface to ../surf/rh.sphere.reg... registration took 0.90 hours mris_register utimesec 3243.853961 mris_register stimesec 0.543990 mris_register ru_maxrss 236584 mris_register ru_ixrss 0 mris_register ru_idrss 0 mris_register ru_isrss 0 mris_register ru_minflt 57298 mris_register ru_majflt 0 mris_register ru_nswap 0 mris_register ru_inblock 8 mris_register ru_oublock 9624 mris_register ru_msgsnd 0 mris_register ru_msgrcv 0 mris_register ru_nsignals 0 mris_register ru_nvcsw 1 mris_register ru_nivcsw 3977 FSRUNTIME@ mris_register 0.9012 hours 1 threads #-------------------------------------------- #@# Jacobian white lh Thu 17 Nov 2022 08:17:56 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_jacobian ../surf/lh.white.preaparc ../surf/lh.sphere.reg ../surf/lh.jacobian_white reading surface from ../surf/lh.white.preaparc... writing curvature file ../surf/lh.jacobian_white #-------------------------------------------- #@# Jacobian white rh Thu 17 Nov 2022 08:17:58 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_jacobian ../surf/rh.white.preaparc ../surf/rh.sphere.reg ../surf/rh.jacobian_white reading surface from ../surf/rh.white.preaparc... writing curvature file ../surf/rh.jacobian_white #-------------------------------------------- #@# AvgCurv lh Thu 17 Nov 2022 08:17:59 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mrisp_paint -a 5 /opt/freesurfer/average/lh.folding.atlas.acfb40.noaparc.i12.2016-08-02.tif#6 ../surf/lh.sphere.reg ../surf/lh.avg_curv averaging curvature patterns 5 times... reading surface from ../surf/lh.sphere.reg... reading template parameterization from /opt/freesurfer/average/lh.folding.atlas.acfb40.noaparc.i12.2016-08-02.tif... writing curvature file to ../surf/lh.avg_curv... #-------------------------------------------- #@# AvgCurv rh Thu 17 Nov 2022 08:18:00 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mrisp_paint -a 5 /opt/freesurfer/average/rh.folding.atlas.acfb40.noaparc.i12.2016-08-02.tif#6 ../surf/rh.sphere.reg ../surf/rh.avg_curv averaging curvature patterns 5 times... reading surface from ../surf/rh.sphere.reg... reading template parameterization from /opt/freesurfer/average/rh.folding.atlas.acfb40.noaparc.i12.2016-08-02.tif... writing curvature file to ../surf/rh.avg_curv... #----------------------------------------- #@# Cortical Parc lh Thu 17 Nov 2022 08:18:01 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_ca_label -l ../label/lh.cortex.label -aseg ../mri/aseg.presurf.mgz -seed 1234 sub057 lh ../surf/lh.sphere.reg /opt/freesurfer/average/lh.DKaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs ../label/lh.aparc.annot setting seed for random number generator to 1234 using ../mri/aseg.presurf.mgz aseg volume to correct midline $Id: mris_ca_label.c,v 1.37 2014/02/04 17:46:42 fischl Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading atlas from /opt/freesurfer/average/lh.DKaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs... reading color table from GCSA file.... average std = 0.8 using min determinant for regularization = 0.006 0 singular and 342 ill-conditioned covariance matrices regularized input 0: MEAN CURVATURE, flags 0, avgs 5, name mean_curvature labeling surface... 1705 labels changed using aseg relabeling using gibbs priors... 000: 3094 changed, 137924 examined... 001: 703 changed, 13046 examined... 002: 168 changed, 3885 examined... 003: 55 changed, 1035 examined... 004: 17 changed, 322 examined... 005: 4 changed, 101 examined... 006: 3 changed, 24 examined... 007: 0 changed, 17 examined... 245 labels changed using aseg 000: 131 total segments, 88 labels (358 vertices) changed 001: 44 total segments, 4 labels (16 vertices) changed 002: 40 total segments, 0 labels (0 vertices) changed 10 filter iterations complete (10 requested, 7 changed) rationalizing unknown annotations with cortex label relabeling unknown label... relabeling corpuscallosum label... 1902 vertices marked for relabeling... 1902 labels changed in reclassification. writing output to ../label/lh.aparc.annot... classification took 0 minutes and 14 seconds. #----------------------------------------- #@# Cortical Parc rh Thu 17 Nov 2022 08:18:16 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_ca_label -l ../label/rh.cortex.label -aseg ../mri/aseg.presurf.mgz -seed 1234 sub057 rh ../surf/rh.sphere.reg /opt/freesurfer/average/rh.DKaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs ../label/rh.aparc.annot setting seed for random number generator to 1234 using ../mri/aseg.presurf.mgz aseg volume to correct midline $Id: mris_ca_label.c,v 1.37 2014/02/04 17:46:42 fischl Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading atlas from /opt/freesurfer/average/rh.DKaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs... reading color table from GCSA file.... average std = 0.7 using min determinant for regularization = 0.004 0 singular and 309 ill-conditioned covariance matrices regularized input 0: MEAN CURVATURE, flags 0, avgs 5, name mean_curvature labeling surface... 1343 labels changed using aseg relabeling using gibbs priors... 000: 2941 changed, 136762 examined... 001: 642 changed, 12491 examined... 002: 135 changed, 3634 examined... 003: 46 changed, 818 examined... 004: 14 changed, 296 examined... 005: 3 changed, 75 examined... 006: 1 changed, 24 examined... 007: 0 changed, 6 examined... 167 labels changed using aseg 000: 110 total segments, 72 labels (335 vertices) changed 001: 41 total segments, 3 labels (3 vertices) changed 002: 38 total segments, 0 labels (0 vertices) changed 10 filter iterations complete (10 requested, 7 changed) rationalizing unknown annotations with cortex label relabeling unknown label... relabeling corpuscallosum label... 1871 vertices marked for relabeling... 1871 labels changed in reclassification. writing output to ../label/rh.aparc.annot... classification took 0 minutes and 14 seconds. #-------------------------------------------- #@# Make Pial Surf lh Thu 17 Nov 2022 08:18:30 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_make_surfaces -orig_white white.preaparc -orig_pial white.preaparc -aseg ../mri/aseg.presurf -mgz -T1 brain.finalsurfs sub057 lh using white.preaparc starting white location... using white.preaparc starting pial locations... using aseg volume ../mri/aseg.presurf to prevent surfaces crossing the midline INFO: assuming MGZ format for volumes. using brain.finalsurfs as T1 volume... $Id: mris_make_surfaces.c,v 1.164.2.4 2016/12/13 22:26:32 zkaufman Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading volume /home/shenkang/Desktop/T1/RESULTS/sub057/mri/filled.mgz... reading volume /home/shenkang/Desktop/T1/RESULTS/sub057/mri/brain.finalsurfs.mgz... reading volume /home/shenkang/Desktop/T1/RESULTS/sub057/mri/../mri/aseg.presurf.mgz... reading volume /home/shenkang/Desktop/T1/RESULTS/sub057/mri/wm.mgz... 20232 bright wm thresholded. 605 bright non-wm voxels segmented. reading original surface position from /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.orig... computing class statistics... border white: 233197 voxels (1.39%) border gray 296683 voxels (1.77%) WM (98.0): 97.8 +- 9.5 [70.0 --> 110.0] GM (67.0) : 67.2 +- 9.6 [30.0 --> 110.0] setting MIN_GRAY_AT_WHITE_BORDER to 52.4 (was 70) setting MAX_BORDER_WHITE to 113.5 (was 105) setting MIN_BORDER_WHITE to 62.0 (was 85) setting MAX_CSF to 42.7 (was 40) setting MAX_GRAY to 94.5 (was 95) setting MAX_GRAY_AT_CSF_BORDER to 52.4 (was 75) setting MIN_GRAY_AT_CSF_BORDER to 33.1 (was 40) using class modes intead of means, discounting robust sigmas.... intensity peaks found at WM=104+-7.0, GM=62+-7.0 mean inside = 92.6, mean outside = 70.8 smoothing surface for 5 iterations... reading initial white vertex positions from white.preaparc... reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) repositioning cortical surface to gray/white boundary smoothing T1 volume with sigma = 2.000 vertex spacing 0.90 +- 0.25 (0.05-->4.67) (max @ vno 52026 --> 52044) face area 0.34 +- 0.16 (0.00-->3.75) mean absolute distance = 0.50 +- 0.64 3000 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... inhibiting deformation at non-cortical midline structures... deleting segment 0 with 89 points - only 0.00% unknown deleting segment 3 with 10 points - only 0.00% unknown deleting segment 4 with 193 points - only 0.00% unknown deleting segment 5 with 9 points - only 0.00% unknown deleting segment 6 with 6 points - only 0.00% unknown removing 1 vertex label from ripped group deleting segment 7 with 1 points - only 0.00% unknown removing 2 vertex label from ripped group deleting segment 8 with 2 points - only 0.00% unknown deleting segment 9 with 105 points - only 0.00% unknown removing 1 vertex label from ripped group deleting segment 10 with 1 points - only 0.00% unknown removing 2 vertex label from ripped group deleting segment 11 with 2 points - only 0.00% unknown deleting segment 12 with 5 points - only 0.00% unknown removing 4 vertex label from ripped group deleting segment 13 with 4 points - only 0.00% unknown mean border=74.8, 89 (78) missing vertices, mean dist 0.4 [0.5 (%11.1)->0.5 (%88.9))] %78 local maxima, %18 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=2.0, host=shenk, nav=4, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 complete_dist_mat 0 rms 0 smooth_averages 0 remove_neg 0 ico_order 0 which_surface 0 target_radius 0.000000 nfields 0 scale 0.000000 desired_rms_height 0.000000 momentum 0.000000 nbhd_size 0 max_nbrs 0 niterations 25 nsurfaces 0 SURFACES 3 flags 0 (0) use curv 0 no sulc 0 no rigid align 0 mris->nsize 2 mris->hemisphere 0 randomSeed 0 smoothing T1 volume with sigma = 1.000 vertex spacing 0.93 +- 0.26 (0.08-->4.36) (max @ vno 49396 --> 50819) face area 0.34 +- 0.16 (0.00-->3.52) mean absolute distance = 0.29 +- 0.42 2254 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... 000: dt: 0.0000, sse=2756004.5, rms=8.845 001: dt: 0.5000, sse=1346206.0, rms=5.010 (43.362%) 002: dt: 0.5000, sse=1105755.0, rms=4.021 (19.737%) 003: dt: 0.5000, sse=1086049.2, rms=3.939 (2.036%) 004: dt: 0.5000, sse=1045883.8, rms=3.744 (4.953%) rms = 3.88, time step reduction 1 of 3 to 0.250... 005: dt: 0.2500, sse=866775.4, rms=2.641 (29.455%) 006: dt: 0.2500, sse=813413.4, rms=2.185 (17.269%) 007: dt: 0.2500, sse=791367.4, rms=2.009 (8.072%) rms = 1.98, time step reduction 2 of 3 to 0.125... 008: dt: 0.2500, sse=790843.8, rms=1.975 (1.662%) 009: dt: 0.1250, sse=781673.1, rms=1.896 (3.989%) rms = 1.88, time step reduction 3 of 3 to 0.062... 010: dt: 0.1250, sse=780629.2, rms=1.882 (0.768%) positioning took 0.9 minutes inhibiting deformation at non-cortical midline structures... deleting segment 0 with 85 points - only 0.00% unknown deleting segment 2 with 151 points - only 0.00% unknown deleting segment 3 with 6 points - only 0.00% unknown deleting segment 4 with 6 points - only 0.00% unknown removing 2 vertex label from ripped group deleting segment 5 with 2 points - only 0.00% unknown deleting segment 6 with 38 points - only 0.00% unknown deleting segment 7 with 43 points - only 11.63% unknown mean border=79.1, 112 (22) missing vertices, mean dist -0.2 [0.3 (%83.4)->0.2 (%16.6))] %89 local maxima, % 7 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=1.0, host=shenk, nav=2, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 smoothing T1 volume with sigma = 0.500 vertex spacing 0.92 +- 0.26 (0.10-->4.35) (max @ vno 49396 --> 50819) face area 0.36 +- 0.17 (0.00-->3.88) mean absolute distance = 0.19 +- 0.31 2637 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... 000: dt: 0.0000, sse=1469412.6, rms=5.280 011: dt: 0.5000, sse=1025771.1, rms=3.325 (37.039%) rms = 3.77, time step reduction 1 of 3 to 0.250... 012: dt: 0.2500, sse=874947.1, rms=2.326 (30.031%) 013: dt: 0.2500, sse=826505.9, rms=1.869 (19.660%) 014: dt: 0.2500, sse=808867.0, rms=1.682 (10.012%) rms = 1.66, time step reduction 2 of 3 to 0.125... 015: dt: 0.2500, sse=807874.1, rms=1.662 (1.196%) 016: dt: 0.1250, sse=796332.3, rms=1.564 (5.890%) rms = 1.54, time step reduction 3 of 3 to 0.062... 017: dt: 0.1250, sse=794732.0, rms=1.542 (1.362%) positioning took 0.6 minutes inhibiting deformation at non-cortical midline structures... deleting segment 0 with 73 points - only 0.00% unknown removing 2 vertex label from ripped group deleting segment 4 with 10 points - only 0.00% unknown deleting segment 5 with 172 points - only 0.00% unknown deleting segment 6 with 6 points - only 0.00% unknown removing 2 vertex label from ripped group deleting segment 7 with 2 points - only 0.00% unknown deleting segment 8 with 69 points - only 0.00% unknown deleting segment 9 with 43 points - only 11.63% unknown deleting segment 10 with 5 points - only 0.00% unknown removing 1 vertex label from ripped group deleting segment 11 with 1 points - only 0.00% unknown mean border=81.3, 119 (16) missing vertices, mean dist -0.1 [0.2 (%71.5)->0.2 (%28.5))] %92 local maxima, % 4 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=0.5, host=shenk, nav=1, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 smoothing T1 volume with sigma = 0.250 vertex spacing 0.91 +- 0.26 (0.09-->4.33) (max @ vno 49396 --> 50819) face area 0.35 +- 0.17 (0.00-->3.79) mean absolute distance = 0.17 +- 0.28 3033 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... 000: dt: 0.0000, sse=926677.9, rms=2.881 rms = 3.29, time step reduction 1 of 3 to 0.250... 018: dt: 0.2500, sse=799731.4, rms=1.869 (35.106%) 019: dt: 0.2500, sse=759314.6, rms=1.350 (27.782%) rms = 1.31, time step reduction 2 of 3 to 0.125... 020: dt: 0.2500, sse=755597.2, rms=1.311 (2.916%) 021: dt: 0.1250, sse=746953.8, rms=1.219 (6.995%) rms = 1.21, time step reduction 3 of 3 to 0.062... 022: dt: 0.1250, sse=746439.8, rms=1.215 (0.353%) positioning took 0.4 minutes inhibiting deformation at non-cortical midline structures... deleting segment 0 with 61 points - only 0.00% unknown deleting segment 1 with 10 points - only 0.00% unknown deleting segment 2 with 178 points - only 0.00% unknown deleting segment 3 with 7 points - only 0.00% unknown removing 2 vertex label from ripped group deleting segment 4 with 2 points - only 0.00% unknown deleting segment 5 with 74 points - only 0.00% unknown deleting segment 6 with 43 points - only 11.63% unknown deleting segment 7 with 5 points - only 0.00% unknown removing 2 vertex label from ripped group deleting segment 8 with 2 points - only 0.00% unknown mean border=82.0, 101 (9) missing vertices, mean dist -0.0 [0.2 (%55.9)->0.2 (%44.1))] %93 local maxima, % 3 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=0.2, host=shenk, nav=0, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 writing white matter surface to /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white... writing smoothed curvature to lh.curv 000: dt: 0.0000, sse=752955.9, rms=1.423 rms = 1.95, time step reduction 1 of 3 to 0.250... 023: dt: 0.2500, sse=725887.6, rms=0.996 (29.959%) 024: dt: 0.2500, sse=720540.6, rms=0.903 (9.356%) rms = 0.92, time step reduction 2 of 3 to 0.125... rms = 0.90, time step reduction 3 of 3 to 0.062... 025: dt: 0.1250, sse=719631.6, rms=0.899 (0.476%) positioning took 0.3 minutes generating cortex label... 6 non-cortical segments detected only using segment with 6837 vertices erasing segment 0 (vno[0] = 30309) erasing segment 2 (vno[0] = 77823) erasing segment 3 (vno[0] = 88648) erasing segment 4 (vno[0] = 90163) erasing segment 5 (vno[0] = 94058) writing cortex label to /home/shenkang/Desktop/T1/RESULTS/sub057/label/lh.cortex.label... writing curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.curv writing smoothed area to lh.area writing curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.area vertex spacing 0.91 +- 0.26 (0.03-->4.67) (max @ vno 52026 --> 52044) face area 0.35 +- 0.17 (0.00-->3.77) repositioning cortical surface to gray/csf boundary. smoothing T1 volume with sigma = 2.000 averaging target values for 5 iterations... inhibiting deformation at non-cortical midline structures... deleting segment 0 with 43 points - only 0.00% unknown smoothing surface for 5 iterations... reading initial pial vertex positions from white.preaparc... mean border=51.9, 90 (90) missing vertices, mean dist 1.5 [1.9 (%0.0)->3.2 (%100.0))] % 9 local maxima, %35 large gradients and %52 min vals, 378 gradients ignored perforing initial smooth deformation to move away from white surface tol=1.0e-04, sigma=2.0, host=shenk, nav=16, nbrs=2, l_surf_repulse=1.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.05 000: dt: 0.0000, sse=25886190.0, rms=30.829 001: dt: 0.0500, sse=22262376.0, rms=28.526 (7.469%) 002: dt: 0.0500, sse=19692098.0, rms=26.773 (6.146%) 003: dt: 0.0500, sse=17755198.0, rms=25.372 (5.234%) 004: dt: 0.0500, sse=16221035.0, rms=24.204 (4.602%) 005: dt: 0.0500, sse=14959611.0, rms=23.200 (4.148%) 006: dt: 0.0500, sse=13891370.0, rms=22.315 (3.817%) 007: dt: 0.0500, sse=12968597.0, rms=21.520 (3.560%) 008: dt: 0.0500, sse=12158650.0, rms=20.798 (3.357%) 009: dt: 0.0500, sse=11439213.0, rms=20.134 (3.190%) 010: dt: 0.0500, sse=10795690.0, rms=19.522 (3.043%) positioning took 0.8 minutes mean border=51.7, 97 (46) missing vertices, mean dist 1.3 [0.7 (%0.0)->2.8 (%100.0))] %10 local maxima, %35 large gradients and %51 min vals, 346 gradients ignored tol=1.0e-04, sigma=2.0, host=shenk, nav=16, nbrs=2, l_surf_repulse=1.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.05 000: dt: 0.0000, sse=11542373.0, rms=20.233 011: dt: 0.0500, sse=10959644.0, rms=19.682 (2.723%) 012: dt: 0.0500, sse=10431574.0, rms=19.169 (2.607%) 013: dt: 0.0500, sse=9951117.0, rms=18.690 (2.500%) 014: dt: 0.0500, sse=9513289.0, rms=18.242 (2.395%) 015: dt: 0.0500, sse=9113547.0, rms=17.824 (2.295%) 016: dt: 0.0500, sse=8747561.0, rms=17.431 (2.200%) 017: dt: 0.0500, sse=8412505.0, rms=17.064 (2.106%) 018: dt: 0.0500, sse=8105375.5, rms=16.721 (2.014%) 019: dt: 0.0500, sse=7823277.5, rms=16.399 (1.926%) 020: dt: 0.0500, sse=7564213.5, rms=16.097 (1.839%) positioning took 0.7 minutes mean border=51.6, 100 (35) missing vertices, mean dist 1.2 [0.1 (%0.6)->2.5 (%99.4))] %11 local maxima, %35 large gradients and %50 min vals, 339 gradients ignored tol=1.0e-04, sigma=2.0, host=shenk, nav=16, nbrs=2, l_surf_repulse=1.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.05 000: dt: 0.0000, sse=7695898.5, rms=16.260 021: dt: 0.0500, sse=7452975.0, rms=15.974 (1.754%) 022: dt: 0.0500, sse=7228999.0, rms=15.707 (1.675%) 023: dt: 0.0500, sse=7021670.0, rms=15.455 (1.604%) 024: dt: 0.0500, sse=6829686.0, rms=15.218 (1.534%) 025: dt: 0.0500, sse=6651418.0, rms=14.994 (1.470%) 026: dt: 0.0500, sse=6485367.5, rms=14.783 (1.411%) 027: dt: 0.0500, sse=6329694.5, rms=14.581 (1.361%) 028: dt: 0.0500, sse=6182847.0, rms=14.389 (1.320%) 029: dt: 0.0500, sse=6043974.0, rms=14.204 (1.282%) 030: dt: 0.0500, sse=5912156.5, rms=14.027 (1.250%) positioning took 0.8 minutes mean border=51.5, 127 (33) missing vertices, mean dist 1.1 [0.1 (%5.3)->2.3 (%94.7))] %11 local maxima, %35 large gradients and %50 min vals, 326 gradients ignored tol=1.0e-04, sigma=2.0, host=shenk, nav=16, nbrs=2, l_surf_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 smoothing T1 volume with sigma = 1.000 averaging target values for 5 iterations... 000: dt: 0.0000, sse=6007568.0, rms=14.159 031: dt: 0.5000, sse=5041304.5, rms=12.795 (9.630%) 032: dt: 0.5000, sse=4369064.0, rms=11.746 (8.201%) 033: dt: 0.5000, sse=3858931.8, rms=10.880 (7.375%) 034: dt: 0.5000, sse=3466333.5, rms=10.157 (6.646%) 035: dt: 0.5000, sse=3146426.2, rms=9.526 (6.212%) 036: dt: 0.5000, sse=2871035.8, rms=8.944 (6.103%) 037: dt: 0.5000, sse=2622008.0, rms=8.387 (6.229%) 038: dt: 0.5000, sse=2404666.5, rms=7.868 (6.192%) 039: dt: 0.5000, sse=2200026.5, rms=7.350 (6.577%) 040: dt: 0.5000, sse=2020135.1, rms=6.864 (6.622%) 041: dt: 0.5000, sse=1861726.8, rms=6.408 (6.634%) 042: dt: 0.5000, sse=1741927.1, rms=6.038 (5.780%) 043: dt: 0.5000, sse=1637038.8, rms=5.698 (5.622%) 044: dt: 0.5000, sse=1559821.8, rms=5.434 (4.647%) 045: dt: 0.5000, sse=1498713.5, rms=5.216 (4.006%) 046: dt: 0.5000, sse=1462664.6, rms=5.082 (2.566%) 047: dt: 0.5000, sse=1433780.8, rms=4.974 (2.133%) 048: dt: 0.5000, sse=1418031.9, rms=4.913 (1.215%) 049: dt: 0.5000, sse=1403750.4, rms=4.859 (1.104%) rms = 4.84, time step reduction 1 of 3 to 0.250... 050: dt: 0.5000, sse=1399165.2, rms=4.840 (0.387%) 051: dt: 0.2500, sse=1335245.6, rms=4.541 (6.173%) 052: dt: 0.2500, sse=1314506.2, rms=4.454 (1.932%) rms = 4.46, time step reduction 2 of 3 to 0.125... rms = 4.43, time step reduction 3 of 3 to 0.062... 053: dt: 0.1250, sse=1309806.6, rms=4.431 (0.508%) positioning took 2.5 minutes mean border=50.7, 2604 (7) missing vertices, mean dist 0.1 [0.2 (%48.1)->0.6 (%51.9))] %20 local maxima, %29 large gradients and %46 min vals, 196 gradients ignored tol=1.0e-04, sigma=1.0, host=shenk, nav=8, nbrs=2, l_surf_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 smoothing T1 volume with sigma = 0.500 averaging target values for 5 iterations... 000: dt: 0.0000, sse=1625094.1, rms=4.593 054: dt: 0.5000, sse=1546011.8, rms=4.261 (7.221%) 055: dt: 0.5000, sse=1509168.1, rms=4.125 (3.197%) rms = 4.17, time step reduction 1 of 3 to 0.250... 056: dt: 0.2500, sse=1440016.8, rms=3.750 (9.095%) 057: dt: 0.2500, sse=1420439.4, rms=3.632 (3.149%) rms = 3.62, time step reduction 2 of 3 to 0.125... 058: dt: 0.2500, sse=1417311.2, rms=3.617 (0.394%) 059: dt: 0.1250, sse=1400620.4, rms=3.519 (2.721%) rms = 3.50, time step reduction 3 of 3 to 0.062... 060: dt: 0.1250, sse=1396822.1, rms=3.500 (0.526%) positioning took 1.0 minutes mean border=50.1, 3130 (7) missing vertices, mean dist 0.1 [0.2 (%43.3)->0.4 (%56.7))] %30 local maxima, %19 large gradients and %45 min vals, 219 gradients ignored tol=1.0e-04, sigma=0.5, host=shenk, nav=4, nbrs=2, l_surf_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 smoothing T1 volume with sigma = 0.250 averaging target values for 5 iterations... 000: dt: 0.0000, sse=1436642.0, rms=3.675 rms = 3.88, time step reduction 1 of 3 to 0.250... 061: dt: 0.2500, sse=1415241.6, rms=3.555 (3.263%) rms = 3.51, time step reduction 2 of 3 to 0.125... 062: dt: 0.2500, sse=1406582.9, rms=3.512 (1.210%) 063: dt: 0.1250, sse=1397287.2, rms=3.456 (1.586%) rms = 3.44, time step reduction 3 of 3 to 0.062... 064: dt: 0.1250, sse=1393192.6, rms=3.437 (0.548%) positioning took 0.6 minutes mean border=49.5, 7115 (6) missing vertices, mean dist 0.1 [0.2 (%44.3)->0.3 (%55.7))] %33 local maxima, %15 large gradients and %43 min vals, 242 gradients ignored tol=1.0e-04, sigma=0.2, host=shenk, nav=2, nbrs=2, l_surf_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 writing pial surface to /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.pial... writing smoothed curvature to lh.curv.pial 000: dt: 0.0000, sse=1407353.2, rms=3.509 rms = 3.65, time step reduction 1 of 3 to 0.250... 065: dt: 0.2500, sse=1393003.2, rms=3.431 (2.243%) 066: dt: 0.2500, sse=1377989.5, rms=3.368 (1.817%) rms = 3.34, time step reduction 2 of 3 to 0.125... 067: dt: 0.2500, sse=1371985.5, rms=3.345 (0.690%) 068: dt: 0.1250, sse=1355500.5, rms=3.247 (2.925%) rms = 3.22, time step reduction 3 of 3 to 0.062... 069: dt: 0.1250, sse=1349413.1, rms=3.217 (0.924%) positioning took 0.8 minutes writing curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.curv.pial writing smoothed area to lh.area.pial writing curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.area.pial vertex spacing 1.08 +- 0.50 (0.05-->8.53) (max @ vno 77935 --> 76385) face area 0.45 +- 0.38 (0.00-->4.59) measuring cortical thickness... writing cortical thickness estimate to 'thickness' file. 0 of 137924 vertices processed 25000 of 137924 vertices processed 50000 of 137924 vertices processed 75000 of 137924 vertices processed 100000 of 137924 vertices processed 125000 of 137924 vertices processed 0 of 137924 vertices processed 25000 of 137924 vertices processed 50000 of 137924 vertices processed 75000 of 137924 vertices processed 100000 of 137924 vertices processed 125000 of 137924 vertices processed thickness calculation complete, 2069:5153 truncations. 24047 vertices at 0 distance 79467 vertices at 1 distance 84639 vertices at 2 distance 46275 vertices at 3 distance 18861 vertices at 4 distance 6925 vertices at 5 distance 2545 vertices at 6 distance 1045 vertices at 7 distance 442 vertices at 8 distance 229 vertices at 9 distance 146 vertices at 10 distance 132 vertices at 11 distance 129 vertices at 12 distance 99 vertices at 13 distance 92 vertices at 14 distance 63 vertices at 15 distance 45 vertices at 16 distance 39 vertices at 17 distance 40 vertices at 18 distance 33 vertices at 19 distance 37 vertices at 20 distance writing curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.thickness positioning took 12.8 minutes #-------------------------------------------- #@# Make Pial Surf rh Thu 17 Nov 2022 08:31:19 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_make_surfaces -orig_white white.preaparc -orig_pial white.preaparc -aseg ../mri/aseg.presurf -mgz -T1 brain.finalsurfs sub057 rh using white.preaparc starting white location... using white.preaparc starting pial locations... using aseg volume ../mri/aseg.presurf to prevent surfaces crossing the midline INFO: assuming MGZ format for volumes. using brain.finalsurfs as T1 volume... $Id: mris_make_surfaces.c,v 1.164.2.4 2016/12/13 22:26:32 zkaufman Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading volume /home/shenkang/Desktop/T1/RESULTS/sub057/mri/filled.mgz... reading volume /home/shenkang/Desktop/T1/RESULTS/sub057/mri/brain.finalsurfs.mgz... reading volume /home/shenkang/Desktop/T1/RESULTS/sub057/mri/../mri/aseg.presurf.mgz... reading volume /home/shenkang/Desktop/T1/RESULTS/sub057/mri/wm.mgz... 20232 bright wm thresholded. 605 bright non-wm voxels segmented. reading original surface position from /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.orig... computing class statistics... border white: 233197 voxels (1.39%) border gray 296683 voxels (1.77%) WM (98.0): 97.8 +- 9.5 [70.0 --> 110.0] GM (67.0) : 67.2 +- 9.6 [30.0 --> 110.0] setting MIN_GRAY_AT_WHITE_BORDER to 54.4 (was 70) setting MAX_BORDER_WHITE to 113.5 (was 105) setting MIN_BORDER_WHITE to 64.0 (was 85) setting MAX_CSF to 44.7 (was 40) setting MAX_GRAY to 94.5 (was 95) setting MAX_GRAY_AT_CSF_BORDER to 54.4 (was 75) setting MIN_GRAY_AT_CSF_BORDER to 35.1 (was 40) using class modes intead of means, discounting robust sigmas.... intensity peaks found at WM=104+-7.0, GM=64+-6.1 mean inside = 92.8, mean outside = 71.3 smoothing surface for 5 iterations... reading initial white vertex positions from white.preaparc... reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) repositioning cortical surface to gray/white boundary smoothing T1 volume with sigma = 2.000 vertex spacing 0.90 +- 0.25 (0.02-->5.75) (max @ vno 45420 --> 45437) face area 0.34 +- 0.16 (0.00-->4.60) mean absolute distance = 0.46 +- 0.64 2811 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... inhibiting deformation at non-cortical midline structures... deleting segment 0 with 34 points - only 0.00% unknown deleting segment 1 with 21 points - only 0.00% unknown deleting segment 5 with 338 points - only 0.00% unknown deleting segment 7 with 71 points - only 0.00% unknown deleting segment 8 with 24 points - only 0.00% unknown deleting segment 9 with 7 points - only 0.00% unknown deleting segment 10 with 6 points - only 0.00% unknown deleting segment 11 with 6 points - only 0.00% unknown removing 4 vertex label from ripped group deleting segment 12 with 4 points - only 0.00% unknown mean border=76.2, 83 (82) missing vertices, mean dist 0.3 [0.5 (%12.5)->0.5 (%87.5))] %75 local maxima, %21 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=2.0, host=shenk, nav=4, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 complete_dist_mat 0 rms 0 smooth_averages 0 remove_neg 0 ico_order 0 which_surface 0 target_radius 0.000000 nfields 0 scale 0.000000 desired_rms_height 0.000000 momentum 0.000000 nbhd_size 0 max_nbrs 0 niterations 25 nsurfaces 0 SURFACES 3 flags 0 (0) use curv 0 no sulc 0 no rigid align 0 mris->nsize 2 mris->hemisphere 1 randomSeed 0 smoothing T1 volume with sigma = 1.000 vertex spacing 0.93 +- 0.26 (0.08-->6.08) (max @ vno 45420 --> 45437) face area 0.34 +- 0.16 (0.00-->4.18) mean absolute distance = 0.28 +- 0.46 2041 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... 000: dt: 0.0000, sse=2374377.8, rms=8.010 001: dt: 0.5000, sse=1237869.6, rms=4.616 (42.380%) 002: dt: 0.5000, sse=1066320.9, rms=3.866 (16.238%) rms = 3.92, time step reduction 1 of 3 to 0.250... 003: dt: 0.2500, sse=893872.8, rms=2.881 (25.491%) 004: dt: 0.2500, sse=831052.2, rms=2.404 (16.542%) 005: dt: 0.2500, sse=801326.9, rms=2.164 (10.002%) 006: dt: 0.2500, sse=793562.3, rms=2.081 (3.824%) 007: dt: 0.2500, sse=786629.2, rms=2.010 (3.399%) rms = 1.97, time step reduction 2 of 3 to 0.125... 008: dt: 0.2500, sse=783369.4, rms=1.970 (2.019%) 009: dt: 0.1250, sse=777022.6, rms=1.902 (3.435%) rms = 1.89, time step reduction 3 of 3 to 0.062... 010: dt: 0.1250, sse=775596.6, rms=1.889 (0.695%) positioning took 0.8 minutes inhibiting deformation at non-cortical midline structures... deleting segment 0 with 70 points - only 0.00% unknown deleting segment 1 with 23 points - only 0.00% unknown removing 3 vertex label from ripped group deleting segment 3 with 151 points - only 0.00% unknown removing 3 vertex label from ripped group deleting segment 4 with 3 points - only 0.00% unknown deleting segment 5 with 33 points - only 0.00% unknown deleting segment 6 with 19 points - only 0.00% unknown deleting segment 7 with 27 points - only 0.00% unknown deleting segment 8 with 6 points - only 0.00% unknown removing 2 vertex label from ripped group deleting segment 9 with 2 points - only 0.00% unknown deleting segment 10 with 7 points - only 0.00% unknown removing 2 vertex label from ripped group deleting segment 11 with 2 points - only 0.00% unknown removing 3 vertex label from ripped group deleting segment 12 with 3 points - only 0.00% unknown mean border=79.9, 116 (33) missing vertices, mean dist -0.2 [0.3 (%80.4)->0.3 (%19.6))] %87 local maxima, % 9 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=1.0, host=shenk, nav=2, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 smoothing T1 volume with sigma = 0.500 vertex spacing 0.92 +- 0.26 (0.04-->6.17) (max @ vno 45420 --> 45437) face area 0.36 +- 0.17 (0.00-->4.81) mean absolute distance = 0.20 +- 0.35 2442 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... 000: dt: 0.0000, sse=1301702.9, rms=4.713 011: dt: 0.5000, sse=985829.7, rms=3.177 (32.594%) rms = 3.72, time step reduction 1 of 3 to 0.250... 012: dt: 0.2500, sse=843553.0, rms=2.183 (31.273%) 013: dt: 0.2500, sse=804311.4, rms=1.810 (17.099%) 014: dt: 0.2500, sse=791329.4, rms=1.670 (7.705%) rms = 1.67, time step reduction 2 of 3 to 0.125... rms = 1.63, time step reduction 3 of 3 to 0.062... 015: dt: 0.1250, sse=788113.1, rms=1.634 (2.185%) positioning took 0.4 minutes inhibiting deformation at non-cortical midline structures... deleting segment 0 with 79 points - only 0.00% unknown deleting segment 1 with 23 points - only 0.00% unknown deleting segment 2 with 185 points - only 0.00% unknown deleting segment 4 with 117 points - only 0.00% unknown deleting segment 5 with 23 points - only 0.00% unknown deleting segment 6 with 50 points - only 0.00% unknown deleting segment 7 with 11 points - only 0.00% unknown removing 2 vertex label from ripped group deleting segment 8 with 2 points - only 0.00% unknown deleting segment 9 with 7 points - only 0.00% unknown removing 4 vertex label from ripped group deleting segment 10 with 4 points - only 0.00% unknown removing 3 vertex label from ripped group deleting segment 11 with 3 points - only 0.00% unknown removing 3 vertex label from ripped group deleting segment 12 with 3 points - only 0.00% unknown mean border=81.9, 152 (23) missing vertices, mean dist -0.1 [0.2 (%68.2)->0.2 (%31.8))] %90 local maxima, % 6 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=0.5, host=shenk, nav=1, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 smoothing T1 volume with sigma = 0.250 vertex spacing 0.91 +- 0.26 (0.10-->6.21) (max @ vno 45420 --> 45437) face area 0.35 +- 0.17 (0.00-->4.77) mean absolute distance = 0.18 +- 0.30 2563 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... 000: dt: 0.0000, sse=894709.7, rms=2.712 rms = 3.11, time step reduction 1 of 3 to 0.250... 016: dt: 0.2500, sse=791958.5, rms=1.848 (31.881%) 017: dt: 0.2500, sse=757212.7, rms=1.431 (22.545%) rms = 1.40, time step reduction 2 of 3 to 0.125... 018: dt: 0.2500, sse=755542.1, rms=1.400 (2.149%) 019: dt: 0.1250, sse=748341.8, rms=1.310 (6.459%) rms = 1.30, time step reduction 3 of 3 to 0.062... 020: dt: 0.1250, sse=747220.8, rms=1.300 (0.781%) positioning took 0.3 minutes inhibiting deformation at non-cortical midline structures... deleting segment 0 with 65 points - only 0.00% unknown deleting segment 1 with 23 points - only 0.00% unknown deleting segment 2 with 189 points - only 0.00% unknown deleting segment 4 with 123 points - only 0.00% unknown deleting segment 5 with 22 points - only 0.00% unknown deleting segment 6 with 72 points - only 0.00% unknown removing 2 vertex label from ripped group deleting segment 7 with 2 points - only 0.00% unknown deleting segment 8 with 7 points - only 0.00% unknown deleting segment 9 with 5 points - only 0.00% unknown removing 3 vertex label from ripped group deleting segment 10 with 3 points - only 0.00% unknown removing 4 vertex label from ripped group deleting segment 11 with 4 points - only 0.00% unknown mean border=82.6, 175 (19) missing vertices, mean dist -0.0 [0.2 (%55.5)->0.2 (%44.5))] %91 local maxima, % 5 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=0.2, host=shenk, nav=0, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 writing white matter surface to /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white... writing smoothed curvature to rh.curv 000: dt: 0.0000, sse=748794.6, rms=1.436 rms = 1.93, time step reduction 1 of 3 to 0.250... 021: dt: 0.2500, sse=721794.6, rms=1.029 (28.315%) 022: dt: 0.2500, sse=718040.8, rms=0.922 (10.380%) rms = 0.93, time step reduction 2 of 3 to 0.125... rms = 0.92, time step reduction 3 of 3 to 0.062... 023: dt: 0.1250, sse=715717.1, rms=0.918 (0.465%) positioning took 0.2 minutes generating cortex label... 20 non-cortical segments detected only using segment with 6905 vertices erasing segment 0 (vno[0] = 34328) erasing segment 1 (vno[0] = 35473) erasing segment 2 (vno[0] = 41163) erasing segment 4 (vno[0] = 69594) erasing segment 5 (vno[0] = 71038) erasing segment 6 (vno[0] = 74035) erasing segment 7 (vno[0] = 77970) erasing segment 8 (vno[0] = 80749) erasing segment 9 (vno[0] = 82026) erasing segment 10 (vno[0] = 83393) erasing segment 11 (vno[0] = 84875) erasing segment 12 (vno[0] = 87534) erasing segment 13 (vno[0] = 87568) erasing segment 14 (vno[0] = 87580) erasing segment 15 (vno[0] = 92589) erasing segment 16 (vno[0] = 92639) erasing segment 17 (vno[0] = 94863) erasing segment 18 (vno[0] = 96119) erasing segment 19 (vno[0] = 101636) writing cortex label to /home/shenkang/Desktop/T1/RESULTS/sub057/label/rh.cortex.label... writing curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.curv writing smoothed area to rh.area writing curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.area vertex spacing 0.91 +- 0.26 (0.02-->6.23) (max @ vno 45420 --> 45437) face area 0.35 +- 0.17 (0.00-->4.79) repositioning cortical surface to gray/csf boundary. smoothing T1 volume with sigma = 2.000 averaging target values for 5 iterations... inhibiting deformation at non-cortical midline structures... deleting segment 0 with 68 points - only 0.00% unknown removing 4 vertex label from ripped group removing 2 vertex label from ripped group deleting segment 5 with 2 points - only 0.00% unknown smoothing surface for 5 iterations... reading initial pial vertex positions from white.preaparc... mean border=53.8, 89 (89) missing vertices, mean dist 1.5 [0.6 (%0.0)->3.2 (%100.0))] %10 local maxima, %34 large gradients and %52 min vals, 946 gradients ignored perforing initial smooth deformation to move away from white surface tol=1.0e-04, sigma=2.0, host=shenk, nav=16, nbrs=2, l_surf_repulse=1.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.05 000: dt: 0.0000, sse=23437766.0, rms=29.431 001: dt: 0.0500, sse=20094342.0, rms=27.183 (7.638%) 002: dt: 0.0500, sse=17725358.0, rms=25.470 (6.301%) 003: dt: 0.0500, sse=15942755.0, rms=24.101 (5.375%) 004: dt: 0.0500, sse=14529981.0, rms=22.958 (4.743%) 005: dt: 0.0500, sse=13369678.0, rms=21.975 (4.283%) 006: dt: 0.0500, sse=12389504.0, rms=21.109 (3.943%) 007: dt: 0.0500, sse=11544870.0, rms=20.332 (3.677%) 008: dt: 0.0500, sse=10805403.0, rms=19.628 (3.467%) 009: dt: 0.0500, sse=10149865.0, rms=18.981 (3.296%) 010: dt: 0.0500, sse=9563728.0, rms=18.383 (3.149%) positioning took 0.5 minutes mean border=53.6, 76 (46) missing vertices, mean dist 1.3 [0.1 (%0.0)->2.8 (%100.0))] %11 local maxima, %34 large gradients and %51 min vals, 877 gradients ignored tol=1.0e-04, sigma=2.0, host=shenk, nav=16, nbrs=2, l_surf_repulse=1.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.05 000: dt: 0.0000, sse=10295676.0, rms=19.130 011: dt: 0.0500, sse=9766976.0, rms=18.596 (2.791%) 012: dt: 0.0500, sse=9288797.0, rms=18.100 (2.670%) 013: dt: 0.0500, sse=8855036.0, rms=17.637 (2.556%) 014: dt: 0.0500, sse=8460833.0, rms=17.206 (2.445%) 015: dt: 0.0500, sse=8101954.0, rms=16.804 (2.338%) 016: dt: 0.0500, sse=7774519.0, rms=16.428 (2.236%) 017: dt: 0.0500, sse=7475171.5, rms=16.076 (2.139%) 018: dt: 0.0500, sse=7201220.0, rms=15.748 (2.043%) 019: dt: 0.0500, sse=6950643.0, rms=15.441 (1.948%) 020: dt: 0.0500, sse=6720778.0, rms=15.154 (1.858%) positioning took 0.5 minutes mean border=53.5, 99 (32) missing vertices, mean dist 1.2 [0.1 (%0.7)->2.5 (%99.3))] %11 local maxima, %34 large gradients and %51 min vals, 893 gradients ignored tol=1.0e-04, sigma=2.0, host=shenk, nav=16, nbrs=2, l_surf_repulse=1.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.05 000: dt: 0.0000, sse=6839760.0, rms=15.313 021: dt: 0.0500, sse=6624488.5, rms=15.042 (1.769%) 022: dt: 0.0500, sse=6426826.5, rms=14.788 (1.684%) 023: dt: 0.0500, sse=6243870.5, rms=14.550 (1.612%) 024: dt: 0.0500, sse=6075075.0, rms=14.326 (1.537%) 025: dt: 0.0500, sse=5918665.5, rms=14.116 (1.469%) 026: dt: 0.0500, sse=5773312.0, rms=13.917 (1.407%) 027: dt: 0.0500, sse=5637461.5, rms=13.729 (1.353%) 028: dt: 0.0500, sse=5509728.0, rms=13.550 (1.308%) 029: dt: 0.0500, sse=5389086.0, rms=13.378 (1.269%) 030: dt: 0.0500, sse=5274559.0, rms=13.212 (1.236%) positioning took 0.5 minutes mean border=53.5, 119 (28) missing vertices, mean dist 1.1 [0.1 (%6.7)->2.4 (%93.3))] %12 local maxima, %34 large gradients and %50 min vals, 877 gradients ignored tol=1.0e-04, sigma=2.0, host=shenk, nav=16, nbrs=2, l_surf_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 smoothing T1 volume with sigma = 1.000 averaging target values for 5 iterations... 000: dt: 0.0000, sse=5344985.5, rms=13.317 031: dt: 0.5000, sse=4480958.0, rms=12.007 (9.838%) 032: dt: 0.5000, sse=3892841.0, rms=11.018 (8.236%) 033: dt: 0.5000, sse=3448543.5, rms=10.205 (7.384%) 034: dt: 0.5000, sse=3107525.5, rms=9.527 (6.641%) 035: dt: 0.5000, sse=2829366.2, rms=8.934 (6.219%) 036: dt: 0.5000, sse=2597209.5, rms=8.406 (5.916%) 037: dt: 0.5000, sse=2395463.8, rms=7.919 (5.788%) 038: dt: 0.5000, sse=2222154.8, rms=7.475 (5.609%) 039: dt: 0.5000, sse=2061978.5, rms=7.044 (5.768%) 040: dt: 0.5000, sse=1916667.6, rms=6.629 (5.889%) 041: dt: 0.5000, sse=1783157.8, rms=6.228 (6.048%) 042: dt: 0.5000, sse=1677200.5, rms=5.887 (5.484%) 043: dt: 0.5000, sse=1588935.9, rms=5.591 (5.029%) 044: dt: 0.5000, sse=1526256.8, rms=5.367 (4.007%) 045: dt: 0.5000, sse=1473809.9, rms=5.175 (3.571%) 046: dt: 0.5000, sse=1439195.5, rms=5.042 (2.570%) 047: dt: 0.5000, sse=1404372.4, rms=4.908 (2.662%) 048: dt: 0.5000, sse=1385136.9, rms=4.830 (1.578%) 049: dt: 0.5000, sse=1366421.2, rms=4.757 (1.518%) rms = 4.72, time step reduction 1 of 3 to 0.250... 050: dt: 0.5000, sse=1359108.1, rms=4.725 (0.680%) 051: dt: 0.2500, sse=1310348.0, rms=4.487 (5.033%) 052: dt: 0.2500, sse=1294491.9, rms=4.417 (1.548%) rms = 4.42, time step reduction 2 of 3 to 0.125... rms = 4.40, time step reduction 3 of 3 to 0.062... 053: dt: 0.1250, sse=1290603.6, rms=4.398 (0.431%) positioning took 1.6 minutes mean border=52.6, 2724 (4) missing vertices, mean dist 0.2 [0.2 (%46.0)->0.8 (%54.0))] %21 local maxima, %27 large gradients and %46 min vals, 409 gradients ignored tol=1.0e-04, sigma=1.0, host=shenk, nav=8, nbrs=2, l_surf_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 smoothing T1 volume with sigma = 0.500 averaging target values for 5 iterations... 000: dt: 0.0000, sse=1587143.5, rms=4.507 054: dt: 0.5000, sse=1502295.6, rms=4.133 (8.296%) 055: dt: 0.5000, sse=1448988.4, rms=3.907 (5.481%) rms = 3.95, time step reduction 1 of 3 to 0.250... 056: dt: 0.2500, sse=1397853.2, rms=3.608 (7.649%) 057: dt: 0.2500, sse=1383099.5, rms=3.512 (2.661%) rms = 3.48, time step reduction 2 of 3 to 0.125... 058: dt: 0.2500, sse=1377173.4, rms=3.480 (0.914%) 059: dt: 0.1250, sse=1363251.9, rms=3.393 (2.494%) rms = 3.37, time step reduction 3 of 3 to 0.062... 060: dt: 0.1250, sse=1358865.2, rms=3.370 (0.686%) positioning took 0.8 minutes mean border=52.0, 3145 (3) missing vertices, mean dist 0.1 [0.2 (%42.8)->0.5 (%57.2))] %31 local maxima, %17 large gradients and %45 min vals, 455 gradients ignored tol=1.0e-04, sigma=0.5, host=shenk, nav=4, nbrs=2, l_surf_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 smoothing T1 volume with sigma = 0.250 averaging target values for 5 iterations... 000: dt: 0.0000, sse=1408379.4, rms=3.582 rms = 3.71, time step reduction 1 of 3 to 0.250... 061: dt: 0.2500, sse=1389487.5, rms=3.473 (3.046%) 062: dt: 0.2500, sse=1378090.5, rms=3.414 (1.689%) rms = 3.40, time step reduction 2 of 3 to 0.125... 063: dt: 0.2500, sse=1373787.6, rms=3.398 (0.475%) 064: dt: 0.1250, sse=1361587.2, rms=3.323 (2.200%) rms = 3.30, time step reduction 3 of 3 to 0.062... 065: dt: 0.1250, sse=1356688.6, rms=3.299 (0.732%) positioning took 0.8 minutes mean border=51.6, 6977 (2) missing vertices, mean dist 0.1 [0.2 (%43.8)->0.4 (%56.2))] %34 local maxima, %14 large gradients and %43 min vals, 448 gradients ignored tol=1.0e-04, sigma=0.2, host=shenk, nav=2, nbrs=2, l_surf_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 writing pial surface to /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.pial... writing smoothed curvature to rh.curv.pial 000: dt: 0.0000, sse=1377592.4, rms=3.382 rms = 3.47, time step reduction 1 of 3 to 0.250... 066: dt: 0.2500, sse=1364517.8, rms=3.306 (2.235%) 067: dt: 0.2500, sse=1350384.1, rms=3.243 (1.914%) rms = 3.22, time step reduction 2 of 3 to 0.125... 068: dt: 0.2500, sse=1343940.8, rms=3.217 (0.809%) 069: dt: 0.1250, sse=1330623.9, rms=3.133 (2.600%) rms = 3.10, time step reduction 3 of 3 to 0.062... 070: dt: 0.1250, sse=1325038.0, rms=3.105 (0.902%) positioning took 0.8 minutes writing curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.curv.pial writing smoothed area to rh.area.pial writing curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.area.pial vertex spacing 1.08 +- 0.51 (0.03-->7.92) (max @ vno 75368 --> 73841) face area 0.45 +- 0.39 (0.00-->5.70) measuring cortical thickness... writing cortical thickness estimate to 'thickness' file. 0 of 136762 vertices processed 25000 of 136762 vertices processed 50000 of 136762 vertices processed 75000 of 136762 vertices processed 100000 of 136762 vertices processed 125000 of 136762 vertices processed 0 of 136762 vertices processed 25000 of 136762 vertices processed 50000 of 136762 vertices processed 75000 of 136762 vertices processed 100000 of 136762 vertices processed 125000 of 136762 vertices processed thickness calculation complete, 1694:4944 truncations. 21894 vertices at 0 distance 74581 vertices at 1 distance 86764 vertices at 2 distance 48774 vertices at 3 distance 19356 vertices at 4 distance 6708 vertices at 5 distance 2328 vertices at 6 distance 933 vertices at 7 distance 464 vertices at 8 distance 255 vertices at 9 distance 156 vertices at 10 distance 121 vertices at 11 distance 100 vertices at 12 distance 85 vertices at 13 distance 95 vertices at 14 distance 79 vertices at 15 distance 54 vertices at 16 distance 46 vertices at 17 distance 39 vertices at 18 distance 43 vertices at 19 distance 41 vertices at 20 distance writing curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.thickness positioning took 9.9 minutes #-------------------------------------------- #@# Surf Volume lh Thu 17 Nov 2022 08:41:13 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/surf /home/shenkang/Desktop/T1/RESULTS/sub057/surf mris_calc -o lh.area.mid lh.area add lh.area.pial Saving result to 'lh.area.mid' (type = MRI_CURV_FILE) [ ok ] mris_calc -o lh.area.mid lh.area.mid div 2 Saving result to 'lh.area.mid' (type = MRI_CURV_FILE) [ ok ] mris_convert --volume sub057 lh /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.volume masking with /home/shenkang/Desktop/T1/RESULTS/sub057/label/lh.cortex.label Total face volume 320019 Total vertex volume 315722 (mask=0) #@# sub057 lh 315722 vertexvol Done #-------------------------------------------- #@# Surf Volume rh Thu 17 Nov 2022 08:41:16 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/surf /home/shenkang/Desktop/T1/RESULTS/sub057/surf mris_calc -o rh.area.mid rh.area add rh.area.pial Saving result to 'rh.area.mid' (type = MRI_CURV_FILE) [ ok ] mris_calc -o rh.area.mid rh.area.mid div 2 Saving result to 'rh.area.mid' (type = MRI_CURV_FILE) [ ok ] mris_convert --volume sub057 rh /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.volume masking with /home/shenkang/Desktop/T1/RESULTS/sub057/label/rh.cortex.label Total face volume 318049 Total vertex volume 313899 (mask=0) #@# sub057 rh 313899 vertexvol Done #-------------------------------------------- #@# Cortical ribbon mask Thu 17 Nov 2022 08:41:18 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/mri mris_volmask --aseg_name aseg.presurf --label_left_white 2 --label_left_ribbon 3 --label_right_white 41 --label_right_ribbon 42 --save_ribbon sub057 SUBJECTS_DIR is /home/shenkang/Desktop/T1/RESULTS loading input data... computing distance to left white surface computing distance to left pial surface computing distance to right white surface computing distance to right pial surface hemi masks overlap voxels = 144 writing volume /home/shenkang/Desktop/T1/RESULTS/sub057/mri/ribbon.mgz mris_volmask took 19.64 minutes writing ribbon files #----------------------------------------- #@# Parcellation Stats lh Thu 17 Nov 2022 09:00:57 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_anatomical_stats -th3 -mgz -cortex ../label/lh.cortex.label -f ../stats/lh.aparc.stats -b -a ../label/lh.aparc.annot -c ../label/aparc.annot.ctab sub057 lh white computing statistics for each annotation in ../label/lh.aparc.annot. reading volume /home/shenkang/Desktop/T1/RESULTS/sub057/mri/wm.mgz... reading input surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white... reading input pial surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.pial... reading input white surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white... INFO: using TH3 volume calc INFO: assuming MGZ format for volumes. INFO: using ../label/lh.cortex.label as mask to calc cortex NumVert, SurfArea and MeanThickness. Using TH3 vertex volume calc Total face volume 320019 Total vertex volume 315722 (mask=0) reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Saving annotation colortable ../label/aparc.annot.ctab table columns are: number of vertices total surface area (mm^2) total gray matter volume (mm^3) average cortical thickness +- standard deviation (mm) integrated rectified mean curvature integrated rectified Gaussian curvature folding index intrinsic curvature index structure name atlas_icv (eTIV) = 1451720 mm^3 (det: 1.341929 ) lhCtxGM: 314458.849 314212.000 diff= 246.8 pctdiff= 0.078 rhCtxGM: 311706.989 311551.000 diff= 156.0 pctdiff= 0.050 lhCtxWM: 184609.376 185288.000 diff= -678.6 pctdiff=-0.368 rhCtxWM: 184172.173 183864.000 diff= 308.2 pctdiff= 0.167 SubCortGMVol 60685.000 SupraTentVol 1067623.387 (1065380.000) diff=2243.387 pctdiff=0.210 SupraTentVolNotVent 1057871.387 (1055628.000) diff=2243.387 pctdiff=0.212 BrainSegVol 1200395.000 (1198539.000) diff=1856.000 pctdiff=0.155 BrainSegVolNotVent 1188121.000 (1187977.387) diff=143.613 pctdiff=0.012 BrainSegVolNotVent 1188121.000 CerebellumVol 132317.000 VentChorVol 9752.000 3rd4th5thCSF 2522.000 CSFVol 666.000, OptChiasmVol 176.000 MaskVol 1528690.000 943 696 2660 3.353 0.569 0.113 0.020 8 0.7 bankssts 910 594 2637 3.814 0.826 0.134 0.030 15 1.2 caudalanteriorcingulate 3268 2180 7862 3.039 0.641 0.112 0.022 34 3.1 caudalmiddlefrontal 3332 2386 6510 2.344 0.673 0.144 0.035 56 4.8 cuneus 567 407 2196 4.064 0.627 0.120 0.030 5 0.8 entorhinal 4378 3023 11634 3.211 0.631 0.139 0.031 76 6.1 fusiform 5741 3997 14163 2.931 0.635 0.125 0.026 89 6.0 inferiorparietal 4885 3344 12318 3.004 0.738 0.123 0.031 73 6.6 inferiortemporal 1826 1215 4258 2.913 1.120 0.121 0.031 27 1.9 isthmuscingulate 8573 5840 15831 2.378 0.642 0.143 0.031 132 11.6 lateraloccipital 3542 2453 9233 3.259 0.660 0.129 0.028 56 4.3 lateralorbitofrontal 5418 3779 9864 2.474 0.663 0.143 0.033 85 8.0 lingual 2714 1876 7545 3.327 0.856 0.120 0.029 34 2.8 medialorbitofrontal 5001 3484 15297 3.388 0.651 0.125 0.028 81 5.6 middletemporal 967 658 2652 3.397 0.734 0.092 0.017 6 0.5 parahippocampal 2148 1479 4537 2.771 0.568 0.114 0.020 23 1.6 paracentral 2619 1779 6761 3.166 0.504 0.124 0.026 41 2.7 parsopercularis 1038 738 3312 3.202 0.641 0.167 0.050 32 2.1 parsorbitalis 1990 1400 5483 3.295 0.598 0.126 0.026 26 2.2 parstriangularis 2814 1971 3552 2.042 0.532 0.130 0.031 44 4.0 pericalcarine 6581 4500 12902 2.426 0.761 0.121 0.024 87 6.6 postcentral 1733 1208 4404 3.027 0.962 0.124 0.024 23 1.7 posteriorcingulate 7904 5360 16802 2.798 0.563 0.114 0.022 83 6.7 precentral 5774 4031 12824 2.802 0.618 0.121 0.028 84 6.9 precuneus 1259 866 4214 3.749 0.697 0.143 0.030 27 1.5 rostralanteriorcingulate 7208 5039 18287 3.021 0.636 0.132 0.031 122 8.9 rostralmiddlefrontal 10102 7050 27677 3.233 0.695 0.123 0.027 135 10.2 superiorfrontal 9361 6471 19691 2.524 0.596 0.126 0.026 143 9.4 superiorparietal 6583 4474 17974 3.405 0.670 0.115 0.022 79 6.0 superiortemporal 6294 4481 16053 3.023 0.640 0.136 0.031 99 8.1 supramarginal 369 258 1467 3.902 0.528 0.174 0.052 11 0.8 frontalpole 751 521 3477 4.013 0.773 0.137 0.037 16 1.3 temporalpole 868 558 1961 3.053 0.570 0.120 0.023 12 0.7 transversetemporal 3219 2192 9587 3.981 0.804 0.109 0.029 25 3.8 insula mris_anatomical_stats -th3 -mgz -cortex ../label/lh.cortex.label -f ../stats/lh.aparc.pial.stats -b -a ../label/lh.aparc.annot -c ../label/aparc.annot.ctab sub057 lh pial computing statistics for each annotation in ../label/lh.aparc.annot. reading volume /home/shenkang/Desktop/T1/RESULTS/sub057/mri/wm.mgz... reading input surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.pial... reading input pial surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.pial... reading input white surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white... INFO: using TH3 volume calc INFO: assuming MGZ format for volumes. INFO: using ../label/lh.cortex.label as mask to calc cortex NumVert, SurfArea and MeanThickness. Using TH3 vertex volume calc Total face volume 320019 Total vertex volume 315722 (mask=0) reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Saving annotation colortable ../label/aparc.annot.ctab table columns are: number of vertices total surface area (mm^2) total gray matter volume (mm^3) average cortical thickness +- standard deviation (mm) integrated rectified mean curvature integrated rectified Gaussian curvature folding index intrinsic curvature index structure name atlas_icv (eTIV) = 1451720 mm^3 (det: 1.341929 ) lhCtxGM: 314458.849 314212.000 diff= 246.8 pctdiff= 0.078 rhCtxGM: 311706.989 311551.000 diff= 156.0 pctdiff= 0.050 lhCtxWM: 184609.376 185288.000 diff= -678.6 pctdiff=-0.368 rhCtxWM: 184172.173 183864.000 diff= 308.2 pctdiff= 0.167 SubCortGMVol 60685.000 SupraTentVol 1067623.387 (1065380.000) diff=2243.387 pctdiff=0.210 SupraTentVolNotVent 1057871.387 (1055628.000) diff=2243.387 pctdiff=0.212 BrainSegVol 1200395.000 (1198539.000) diff=1856.000 pctdiff=0.155 BrainSegVolNotVent 1188121.000 (1187977.387) diff=143.613 pctdiff=0.012 BrainSegVolNotVent 1188121.000 CerebellumVol 132317.000 VentChorVol 9752.000 3rd4th5thCSF 2522.000 CSFVol 666.000, OptChiasmVol 176.000 MaskVol 1528690.000 943 856 2660 3.353 0.569 0.136 0.027 16 1.1 bankssts 910 834 2637 3.814 0.826 0.200 0.063 51 2.6 caudalanteriorcingulate 3268 2850 7862 3.039 0.641 0.150 0.034 48 5.2 caudalmiddlefrontal 3332 3256 6510 2.344 0.673 0.170 0.040 54 6.8 cuneus 567 703 2196 4.064 0.627 0.198 0.052 12 1.2 entorhinal 4378 4216 11634 3.211 0.631 0.171 0.042 80 8.7 fusiform 5741 5409 14163 2.931 0.635 0.166 0.037 102 9.6 inferiorparietal 4885 4627 12318 3.004 0.738 0.156 0.034 74 7.6 inferiortemporal 1826 1654 4258 2.913 1.120 0.172 0.043 38 3.2 isthmuscingulate 8573 7450 15831 2.378 0.642 0.158 0.038 121 14.8 lateraloccipital 3542 3236 9233 3.259 0.660 0.161 0.038 67 6.4 lateralorbitofrontal 5418 4549 9864 2.474 0.663 0.148 0.039 66 9.5 lingual 2714 2501 7545 3.327 0.856 0.155 0.041 48 5.1 medialorbitofrontal 5001 5294 15297 3.388 0.651 0.167 0.038 68 8.5 middletemporal 967 868 2652 3.397 0.734 0.136 0.034 10 1.4 parahippocampal 2148 1808 4537 2.771 0.568 0.149 0.031 31 3.2 paracentral 2619 2468 6761 3.166 0.504 0.160 0.037 34 4.3 parsopercularis 1038 1312 3312 3.202 0.641 0.224 0.054 18 3.1 parsorbitalis 1990 1908 5483 3.295 0.598 0.163 0.035 26 3.4 parstriangularis 2814 1681 3552 2.042 0.532 0.134 0.042 66 6.1 pericalcarine 6581 6033 12902 2.426 0.761 0.152 0.033 73 9.7 postcentral 1733 1611 4404 3.027 0.962 0.172 0.054 40 5.1 posteriorcingulate 7904 6425 16802 2.798 0.563 0.135 0.032 92 10.9 precentral 5774 5064 12824 2.802 0.618 0.158 0.036 91 9.7 precuneus 1259 1389 4214 3.749 0.697 0.192 0.046 20 2.6 rostralanteriorcingulate 7208 6747 18287 3.021 0.636 0.168 0.036 111 11.9 rostralmiddlefrontal 10102 9524 27677 3.233 0.695 0.158 0.049 182 26.2 superiorfrontal 9361 8728 19691 2.524 0.596 0.164 0.036 125 15.0 superiorparietal 6583 5811 17974 3.405 0.670 0.159 0.038 125 11.5 superiortemporal 6294 5920 16053 3.023 0.640 0.170 0.040 114 11.9 supramarginal 369 527 1467 3.902 0.528 0.248 0.051 5 1.1 frontalpole 751 1186 3477 4.013 0.773 0.230 0.047 10 1.7 temporalpole 868 842 1961 3.053 0.570 0.162 0.043 10 1.6 transversetemporal 3219 2179 9587 3.981 0.804 0.143 0.043 60 6.1 insula #----------------------------------------- #@# Parcellation Stats rh Thu 17 Nov 2022 09:02:05 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_anatomical_stats -th3 -mgz -cortex ../label/rh.cortex.label -f ../stats/rh.aparc.stats -b -a ../label/rh.aparc.annot -c ../label/aparc.annot.ctab sub057 rh white computing statistics for each annotation in ../label/rh.aparc.annot. reading volume /home/shenkang/Desktop/T1/RESULTS/sub057/mri/wm.mgz... reading input surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white... reading input pial surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.pial... reading input white surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white... INFO: using TH3 volume calc INFO: assuming MGZ format for volumes. INFO: using ../label/rh.cortex.label as mask to calc cortex NumVert, SurfArea and MeanThickness. Using TH3 vertex volume calc Total face volume 318049 Total vertex volume 313899 (mask=0) reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Saving annotation colortable ../label/aparc.annot.ctab table columns are: number of vertices total surface area (mm^2) total gray matter volume (mm^3) average cortical thickness +- standard deviation (mm) integrated rectified mean curvature integrated rectified Gaussian curvature folding index intrinsic curvature index structure name atlas_icv (eTIV) = 1451720 mm^3 (det: 1.341929 ) lhCtxGM: 314458.849 314212.000 diff= 246.8 pctdiff= 0.078 rhCtxGM: 311706.989 311551.000 diff= 156.0 pctdiff= 0.050 lhCtxWM: 184609.376 185288.000 diff= -678.6 pctdiff=-0.368 rhCtxWM: 184172.173 183864.000 diff= 308.2 pctdiff= 0.167 SubCortGMVol 60685.000 SupraTentVol 1067623.387 (1065380.000) diff=2243.387 pctdiff=0.210 SupraTentVolNotVent 1057871.387 (1055628.000) diff=2243.387 pctdiff=0.212 BrainSegVol 1200395.000 (1198539.000) diff=1856.000 pctdiff=0.155 BrainSegVolNotVent 1188121.000 (1187977.387) diff=143.613 pctdiff=0.012 BrainSegVolNotVent 1188121.000 CerebellumVol 132317.000 VentChorVol 9752.000 3rd4th5thCSF 2522.000 CSFVol 666.000, OptChiasmVol 176.000 MaskVol 1528690.000 1052 716 2080 3.202 0.588 0.096 0.019 8 0.7 bankssts 1015 655 2731 3.208 0.887 0.131 0.027 18 1.2 caudalanteriorcingulate 3134 2197 8142 3.051 0.664 0.112 0.022 32 2.8 caudalmiddlefrontal 3748 2535 7907 2.468 0.577 0.142 0.035 61 5.6 cuneus 643 419 2556 3.356 1.085 0.146 0.063 13 1.5 entorhinal 4733 3252 12507 3.077 0.663 0.131 0.033 74 6.3 fusiform 7661 5387 20705 3.155 0.618 0.127 0.031 112 9.4 inferiorparietal 3691 2604 10123 3.198 0.776 0.136 0.037 59 5.4 inferiortemporal 1568 1045 3712 2.839 1.046 0.121 0.026 21 1.4 isthmuscingulate 9045 5996 18127 2.651 0.758 0.131 0.029 137 10.8 lateraloccipital 3516 2403 8730 3.238 0.724 0.123 0.033 57 4.7 lateralorbitofrontal 5325 3686 9881 2.506 0.678 0.139 0.034 79 7.5 lingual 2593 1819 7571 3.311 0.833 0.134 0.040 55 4.1 medialorbitofrontal 4547 3223 13121 3.260 0.756 0.132 0.034 81 6.2 middletemporal 1053 692 2451 2.983 0.616 0.098 0.019 8 0.6 parahippocampal 2497 1690 5402 2.792 0.516 0.121 0.021 28 2.1 paracentral 1737 1223 4557 3.045 0.512 0.114 0.026 24 1.6 parsopercularis 1136 794 3960 3.370 0.665 0.151 0.040 22 1.7 parsorbitalis 2200 1554 6089 3.122 0.633 0.129 0.029 35 2.5 parstriangularis 3087 2220 4480 2.121 0.528 0.137 0.034 46 4.3 pericalcarine 5741 3905 10283 2.288 0.700 0.114 0.023 74 5.3 postcentral 1883 1270 4740 3.065 0.963 0.125 0.027 28 2.1 posteriorcingulate 7851 5314 16073 2.689 0.575 0.105 0.018 75 6.0 precentral 6102 4235 14110 2.909 0.727 0.116 0.024 80 6.4 precuneus 657 429 1892 3.699 0.599 0.099 0.027 7 0.6 rostralanteriorcingulate 8519 5890 21177 2.824 0.684 0.139 0.036 162 12.6 rostralmiddlefrontal 9821 6804 28221 3.324 0.765 0.128 0.033 156 14.2 superiorfrontal 9542 6667 19830 2.500 0.631 0.131 0.028 155 10.7 superiorparietal 5371 3775 14571 3.274 0.743 0.109 0.023 66 4.9 superiortemporal 4718 3297 11498 3.009 0.663 0.132 0.030 82 5.8 supramarginal 426 296 1785 3.802 0.581 0.177 0.074 10 1.3 frontalpole 669 506 3381 4.076 0.567 0.148 0.050 18 1.2 temporalpole 531 356 1233 3.135 0.498 0.139 0.029 9 0.5 transversetemporal 3693 2510 10223 3.679 0.911 0.111 0.031 32 4.8 insula mris_anatomical_stats -th3 -mgz -cortex ../label/rh.cortex.label -f ../stats/rh.aparc.pial.stats -b -a ../label/rh.aparc.annot -c ../label/aparc.annot.ctab sub057 rh pial computing statistics for each annotation in ../label/rh.aparc.annot. reading volume /home/shenkang/Desktop/T1/RESULTS/sub057/mri/wm.mgz... reading input surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.pial... reading input pial surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.pial... reading input white surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white... INFO: using TH3 volume calc INFO: assuming MGZ format for volumes. INFO: using ../label/rh.cortex.label as mask to calc cortex NumVert, SurfArea and MeanThickness. Using TH3 vertex volume calc Total face volume 318049 Total vertex volume 313899 (mask=0) reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Saving annotation colortable ../label/aparc.annot.ctab table columns are: number of vertices total surface area (mm^2) total gray matter volume (mm^3) average cortical thickness +- standard deviation (mm) integrated rectified mean curvature integrated rectified Gaussian curvature folding index intrinsic curvature index structure name atlas_icv (eTIV) = 1451720 mm^3 (det: 1.341929 ) lhCtxGM: 314458.849 314212.000 diff= 246.8 pctdiff= 0.078 rhCtxGM: 311706.989 311551.000 diff= 156.0 pctdiff= 0.050 lhCtxWM: 184609.376 185288.000 diff= -678.6 pctdiff=-0.368 rhCtxWM: 184172.173 183864.000 diff= 308.2 pctdiff= 0.167 SubCortGMVol 60685.000 SupraTentVol 1067623.387 (1065380.000) diff=2243.387 pctdiff=0.210 SupraTentVolNotVent 1057871.387 (1055628.000) diff=2243.387 pctdiff=0.212 BrainSegVol 1200395.000 (1198539.000) diff=1856.000 pctdiff=0.155 BrainSegVolNotVent 1188121.000 (1187977.387) diff=143.613 pctdiff=0.012 BrainSegVolNotVent 1188121.000 CerebellumVol 132317.000 VentChorVol 9752.000 3rd4th5thCSF 2522.000 CSFVol 666.000, OptChiasmVol 176.000 MaskVol 1528690.000 1052 573 2080 3.202 0.588 0.112 0.032 20 1.4 bankssts 1015 939 2731 3.208 0.887 0.174 0.044 32 1.8 caudalanteriorcingulate 3134 2935 8142 3.051 0.664 0.151 0.031 36 4.7 caudalmiddlefrontal 3748 3752 7907 2.468 0.577 0.175 0.041 51 7.2 cuneus 643 935 2556 3.356 1.085 0.228 0.058 13 1.7 entorhinal 4733 4726 12507 3.077 0.663 0.168 0.038 91 8.5 fusiform 7661 7515 20705 3.155 0.618 0.169 0.036 116 13.3 inferiorparietal 3691 3378 10123 3.198 0.776 0.155 0.038 77 6.2 inferiortemporal 1568 1407 3712 2.839 1.046 0.160 0.040 23 3.0 isthmuscingulate 9045 7546 18127 2.651 0.758 0.139 0.034 135 13.7 lateraloccipital 3516 2959 8730 3.238 0.724 0.146 0.038 56 5.8 lateralorbitofrontal 5325 4426 9881 2.506 0.678 0.151 0.039 85 9.1 lingual 2593 2576 7571 3.311 0.833 0.160 0.039 34 4.7 medialorbitofrontal 4547 4562 13121 3.260 0.756 0.163 0.037 74 7.5 middletemporal 1053 934 2451 2.983 0.616 0.129 0.031 8 1.4 parahippocampal 2497 2111 5402 2.792 0.516 0.149 0.034 35 3.9 paracentral 1737 1709 4557 3.045 0.512 0.159 0.031 22 2.4 parsopercularis 1136 1532 3960 3.370 0.665 0.218 0.040 16 2.2 parsorbitalis 2200 2227 6089 3.122 0.633 0.174 0.037 29 3.8 parstriangularis 3087 2165 4480 2.121 0.528 0.139 0.034 52 4.6 pericalcarine 5741 5175 10283 2.288 0.700 0.151 0.032 62 8.9 postcentral 1883 1739 4740 3.065 0.963 0.167 0.040 32 3.6 posteriorcingulate 7851 6455 16073 2.689 0.575 0.132 0.029 90 10.2 precentral 6102 5344 14110 2.909 0.727 0.164 0.051 149 17.1 precuneus 657 581 1892 3.699 0.599 0.165 0.045 18 1.1 rostralanteriorcingulate 8519 8508 21177 2.824 0.684 0.185 0.041 153 17.5 rostralmiddlefrontal 9821 9441 28221 3.324 0.765 0.165 0.039 148 17.9 superiorfrontal 9542 8956 19830 2.500 0.631 0.167 0.037 148 16.6 superiorparietal 5371 5102 14571 3.274 0.743 0.160 0.037 76 9.1 superiortemporal 4718 4246 11498 3.009 0.663 0.157 0.037 71 8.0 supramarginal 426 604 1785 3.802 0.581 0.218 0.039 6 0.7 frontalpole 669 1063 3381 4.076 0.567 0.244 0.043 10 1.6 temporalpole 531 471 1233 3.135 0.498 0.165 0.048 6 1.1 transversetemporal 3693 2603 10223 3.679 0.911 0.154 0.049 85 8.2 insula #----------------------------------------- #@# Cortical Parc 2 lh Thu 17 Nov 2022 09:04:02 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_ca_label -l ../label/lh.cortex.label -aseg ../mri/aseg.presurf.mgz -seed 1234 sub057 lh ../surf/lh.sphere.reg /opt/freesurfer/average/lh.CDaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs ../label/lh.aparc.a2009s.annot setting seed for random number generator to 1234 using ../mri/aseg.presurf.mgz aseg volume to correct midline $Id: mris_ca_label.c,v 1.37 2014/02/04 17:46:42 fischl Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading atlas from /opt/freesurfer/average/lh.CDaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs... reading color table from GCSA file.... average std = 2.9 using min determinant for regularization = 0.086 0 singular and 762 ill-conditioned covariance matrices regularized input 0: MEAN CURVATURE, flags 0, avgs 5, name mean_curvature labeling surface... 38 labels changed using aseg relabeling using gibbs priors... 000: 9102 changed, 137924 examined... 001: 2139 changed, 35478 examined... 002: 612 changed, 11160 examined... 003: 258 changed, 3459 examined... 004: 124 changed, 1469 examined... 005: 68 changed, 677 examined... 006: 35 changed, 368 examined... 007: 15 changed, 190 examined... 008: 6 changed, 79 examined... 009: 1 changed, 32 examined... 010: 3 changed, 7 examined... 011: 1 changed, 12 examined... 012: 0 changed, 5 examined... 0 labels changed using aseg 000: 237 total segments, 152 labels (2023 vertices) changed 001: 100 total segments, 15 labels (64 vertices) changed 002: 87 total segments, 2 labels (11 vertices) changed 003: 85 total segments, 0 labels (0 vertices) changed 10 filter iterations complete (10 requested, 37 changed) rationalizing unknown annotations with cortex label relabeling Medial_wall label... 1327 vertices marked for relabeling... 1327 labels changed in reclassification. writing output to ../label/lh.aparc.a2009s.annot... classification took 0 minutes and 14 seconds. #----------------------------------------- #@# Cortical Parc 2 rh Thu 17 Nov 2022 09:04:16 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_ca_label -l ../label/rh.cortex.label -aseg ../mri/aseg.presurf.mgz -seed 1234 sub057 rh ../surf/rh.sphere.reg /opt/freesurfer/average/rh.CDaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs ../label/rh.aparc.a2009s.annot setting seed for random number generator to 1234 using ../mri/aseg.presurf.mgz aseg volume to correct midline $Id: mris_ca_label.c,v 1.37 2014/02/04 17:46:42 fischl Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading atlas from /opt/freesurfer/average/rh.CDaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs... reading color table from GCSA file.... average std = 1.4 using min determinant for regularization = 0.020 0 singular and 719 ill-conditioned covariance matrices regularized input 0: MEAN CURVATURE, flags 0, avgs 5, name mean_curvature labeling surface... 5 labels changed using aseg relabeling using gibbs priors... 000: 9116 changed, 136762 examined... 001: 2060 changed, 35313 examined... 002: 635 changed, 10907 examined... 003: 272 changed, 3567 examined... 004: 107 changed, 1540 examined... 005: 50 changed, 607 examined... 006: 16 changed, 272 examined... 007: 11 changed, 100 examined... 008: 3 changed, 43 examined... 009: 2 changed, 18 examined... 010: 0 changed, 10 examined... 0 labels changed using aseg 000: 259 total segments, 177 labels (2345 vertices) changed 001: 94 total segments, 12 labels (61 vertices) changed 002: 83 total segments, 1 labels (4 vertices) changed 003: 82 total segments, 0 labels (0 vertices) changed 10 filter iterations complete (10 requested, 42 changed) rationalizing unknown annotations with cortex label relabeling Medial_wall label... 1426 vertices marked for relabeling... 1426 labels changed in reclassification. writing output to ../label/rh.aparc.a2009s.annot... classification took 0 minutes and 14 seconds. #----------------------------------------- #@# Parcellation Stats 2 lh Thu 17 Nov 2022 09:04:30 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_anatomical_stats -th3 -mgz -cortex ../label/lh.cortex.label -f ../stats/lh.aparc.a2009s.stats -b -a ../label/lh.aparc.a2009s.annot -c ../label/aparc.annot.a2009s.ctab sub057 lh white computing statistics for each annotation in ../label/lh.aparc.a2009s.annot. reading volume /home/shenkang/Desktop/T1/RESULTS/sub057/mri/wm.mgz... reading input surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white... reading input pial surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.pial... reading input white surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white... INFO: using TH3 volume calc INFO: assuming MGZ format for volumes. INFO: using ../label/lh.cortex.label as mask to calc cortex NumVert, SurfArea and MeanThickness. Using TH3 vertex volume calc Total face volume 320019 Total vertex volume 315722 (mask=0) reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Saving annotation colortable ../label/aparc.annot.a2009s.ctab table columns are: number of vertices total surface area (mm^2) total gray matter volume (mm^3) average cortical thickness +- standard deviation (mm) integrated rectified mean curvature integrated rectified Gaussian curvature folding index intrinsic curvature index structure name atlas_icv (eTIV) = 1451720 mm^3 (det: 1.341929 ) lhCtxGM: 314458.849 314212.000 diff= 246.8 pctdiff= 0.078 rhCtxGM: 311706.989 311551.000 diff= 156.0 pctdiff= 0.050 lhCtxWM: 184609.376 185288.000 diff= -678.6 pctdiff=-0.368 rhCtxWM: 184172.173 183864.000 diff= 308.2 pctdiff= 0.167 SubCortGMVol 60685.000 SupraTentVol 1067623.387 (1065380.000) diff=2243.387 pctdiff=0.210 SupraTentVolNotVent 1057871.387 (1055628.000) diff=2243.387 pctdiff=0.212 BrainSegVol 1200395.000 (1198539.000) diff=1856.000 pctdiff=0.155 BrainSegVolNotVent 1188121.000 (1187977.387) diff=143.613 pctdiff=0.012 BrainSegVolNotVent 1188121.000 CerebellumVol 132317.000 VentChorVol 9752.000 3rd4th5thCSF 2522.000 CSFVol 666.000, OptChiasmVol 176.000 MaskVol 1528690.000 836 589 2063 3.180 0.676 0.127 0.027 8 1.0 G&S_frontomargin 1850 1261 4408 2.727 0.649 0.132 0.025 28 2.0 G&S_occipital_inf 1722 1163 3551 2.513 0.564 0.131 0.025 25 1.7 G&S_paracentral 1763 1233 5153 3.346 0.617 0.143 0.027 30 2.1 G&S_subcentral 714 512 2819 3.715 0.719 0.168 0.048 16 1.4 G&S_transv_frontopol 2051 1471 5794 3.442 0.683 0.133 0.028 32 2.2 G&S_cingul-Ant 1146 801 2945 3.257 0.765 0.117 0.026 13 1.3 G&S_cingul-Mid-Ant 1305 918 3141 3.146 0.646 0.116 0.023 14 1.2 G&S_cingul-Mid-Post 666 451 2591 3.727 0.663 0.151 0.048 15 1.2 G_cingul-Post-dorsal 398 268 1309 3.435 0.632 0.148 0.049 9 0.6 G_cingul-Post-ventral 3288 2361 6389 2.303 0.768 0.157 0.043 72 6.5 G_cuneus 1380 942 3984 3.151 0.497 0.134 0.028 30 1.5 G_front_inf-Opercular 518 344 1959 3.555 0.379 0.142 0.032 12 0.7 G_front_inf-Orbital 1386 920 4498 3.395 0.567 0.138 0.032 25 1.9 G_front_inf-Triangul 3867 2688 13372 3.353 0.616 0.151 0.038 97 6.2 G_front_middle 6947 4817 21887 3.425 0.668 0.136 0.031 118 8.0 G_front_sup 625 438 2187 4.250 0.760 0.133 0.046 8 1.3 G_Ins_lg&S_cent_ins 620 390 3015 4.689 0.408 0.108 0.035 6 0.8 G_insular_short 2383 1601 6135 2.732 0.711 0.154 0.039 51 4.0 G_occipital_middle 1691 1172 3679 2.502 0.563 0.141 0.036 32 2.3 G_occipital_sup 1978 1309 5924 3.342 0.658 0.147 0.036 42 3.2 G_oc-temp_lat-fusifor 3524 2446 6745 2.368 0.650 0.159 0.040 68 6.2 G_oc-temp_med-Lingual 1225 843 4337 3.776 0.735 0.118 0.029 15 1.2 G_oc-temp_med-Parahip 2440 1696 7700 3.319 0.633 0.155 0.043 62 4.2 G_orbital 2069 1500 6732 3.150 0.670 0.153 0.035 55 3.0 G_pariet_inf-Angular 3494 2527 10861 3.218 0.657 0.154 0.039 73 5.7 G_pariet_inf-Supramar 3330 2324 8556 2.668 0.602 0.140 0.029 70 3.9 G_parietal_sup 2456 1633 5341 2.502 0.648 0.140 0.032 43 3.4 G_postcentral 2998 2000 7787 2.920 0.521 0.120 0.024 42 2.7 G_precentral 2477 1822 7488 2.931 0.652 0.153 0.045 63 4.5 G_precuneus 843 578 3317 3.585 0.616 0.135 0.030 17 1.0 G_rectus 586 362 1036 2.911 0.985 0.111 0.050 8 0.9 G_subcallosal 656 410 1797 3.222 0.565 0.129 0.027 12 0.7 G_temp_sup-G_T_transv 2089 1411 7920 3.667 0.627 0.142 0.031 43 2.5 G_temp_sup-Lateral 833 570 2826 4.087 0.599 0.095 0.017 5 0.6 G_temp_sup-Plan_polar 1099 790 2728 3.056 0.611 0.114 0.026 12 1.1 G_temp_sup-Plan_tempo 2489 1680 7732 3.109 0.872 0.141 0.042 57 4.5 G_temporal_inf 2722 1871 9830 3.512 0.660 0.138 0.032 58 3.4 G_temporal_middle 314 222 551 2.904 0.461 0.106 0.024 2 0.2 Lat_Fis-ant-Horizont 255 187 508 3.405 0.747 0.116 0.022 1 0.2 Lat_Fis-ant-Vertical 1248 846 2114 3.109 0.537 0.121 0.023 12 1.1 Lat_Fis-post 2490 1706 3698 2.002 0.539 0.150 0.035 46 3.8 Pole_occipital 1749 1245 7459 3.669 0.772 0.143 0.040 36 3.0 Pole_temporal 3485 2396 5027 2.373 0.666 0.110 0.021 29 3.0 S_calcarine 3443 2324 4465 2.134 0.563 0.099 0.017 23 2.3 S_central 1171 787 1910 2.709 0.537 0.084 0.010 4 0.5 S_cingul-Marginalis 579 395 1190 3.673 0.644 0.077 0.012 2 0.3 S_circular_insula_ant 1574 1070 3095 3.366 0.711 0.086 0.011 5 0.9 S_circular_insula_inf 1753 1213 3485 3.314 0.660 0.097 0.017 7 1.3 S_circular_insula_sup 1104 784 1939 2.875 0.381 0.093 0.011 5 0.7 S_collat_transv_ant 628 417 751 2.458 0.524 0.132 0.023 6 0.7 S_collat_transv_post 2495 1710 4639 2.793 0.556 0.105 0.021 20 2.1 S_front_inf 1218 839 2105 2.706 0.474 0.109 0.020 10 1.0 S_front_middle 2947 2054 5699 2.753 0.485 0.100 0.018 24 1.9 S_front_sup 252 187 561 2.785 0.519 0.115 0.016 2 0.2 S_interm_prim-Jensen 3749 2589 5985 2.525 0.488 0.103 0.018 28 2.6 S_intrapariet&P_trans 984 668 1332 2.084 0.382 0.119 0.023 6 1.0 S_oc_middle&Lunatus 1505 1003 2244 2.418 0.489 0.126 0.026 18 1.8 S_oc_sup&transversal 725 502 1111 2.751 0.519 0.123 0.025 5 0.8 S_occipital_ant 606 444 1133 2.800 0.423 0.131 0.029 6 0.6 S_oc-temp_lat 2386 1662 4219 2.887 0.661 0.119 0.022 25 2.5 S_oc-temp_med&Lingual 295 223 605 2.838 0.443 0.156 0.031 3 0.5 S_orbital_lateral 420 298 1184 3.793 0.866 0.135 0.028 10 0.4 S_orbital_med-olfact 1138 816 2543 2.945 0.650 0.126 0.027 12 1.3 S_orbital-H_Shaped 2672 1863 4848 2.541 0.526 0.103 0.019 26 2.1 S_parieto_occipital 1579 984 2035 2.397 1.218 0.103 0.014 17 0.7 S_pericallosal 2955 2042 5183 2.407 0.586 0.105 0.016 24 2.0 S_postcentral 1614 1142 3272 2.980 0.475 0.099 0.016 10 1.0 S_precentral-inf-part 1545 1053 2451 2.697 0.493 0.105 0.017 10 1.2 S_precentral-sup-part 920 632 2034 3.174 0.812 0.110 0.017 7 0.7 S_suborbital 970 660 1783 3.154 0.612 0.107 0.020 5 0.8 S_subparietal 1605 1129 2732 2.798 0.471 0.098 0.013 7 1.0 S_temporal_inf 5320 3729 11598 3.175 0.605 0.106 0.019 45 4.0 S_temporal_sup 492 346 696 2.372 0.364 0.101 0.012 3 0.2 S_temporal_transverse #----------------------------------------- #@# Parcellation Stats 2 rh Thu 17 Nov 2022 09:05:11 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_anatomical_stats -th3 -mgz -cortex ../label/rh.cortex.label -f ../stats/rh.aparc.a2009s.stats -b -a ../label/rh.aparc.a2009s.annot -c ../label/aparc.annot.a2009s.ctab sub057 rh white computing statistics for each annotation in ../label/rh.aparc.a2009s.annot. reading volume /home/shenkang/Desktop/T1/RESULTS/sub057/mri/wm.mgz... reading input surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white... reading input pial surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.pial... reading input white surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white... INFO: using TH3 volume calc INFO: assuming MGZ format for volumes. INFO: using ../label/rh.cortex.label as mask to calc cortex NumVert, SurfArea and MeanThickness. Using TH3 vertex volume calc Total face volume 318049 Total vertex volume 313899 (mask=0) reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Saving annotation colortable ../label/aparc.annot.a2009s.ctab table columns are: number of vertices total surface area (mm^2) total gray matter volume (mm^3) average cortical thickness +- standard deviation (mm) integrated rectified mean curvature integrated rectified Gaussian curvature folding index intrinsic curvature index structure name atlas_icv (eTIV) = 1451720 mm^3 (det: 1.341929 ) lhCtxGM: 314458.849 314212.000 diff= 246.8 pctdiff= 0.078 rhCtxGM: 311706.989 311551.000 diff= 156.0 pctdiff= 0.050 lhCtxWM: 184609.376 185288.000 diff= -678.6 pctdiff=-0.368 rhCtxWM: 184172.173 183864.000 diff= 308.2 pctdiff= 0.167 SubCortGMVol 60685.000 SupraTentVol 1067623.387 (1065380.000) diff=2243.387 pctdiff=0.210 SupraTentVolNotVent 1057871.387 (1055628.000) diff=2243.387 pctdiff=0.212 BrainSegVol 1200395.000 (1198539.000) diff=1856.000 pctdiff=0.155 BrainSegVolNotVent 1188121.000 (1187977.387) diff=143.613 pctdiff=0.012 BrainSegVolNotVent 1188121.000 CerebellumVol 132317.000 VentChorVol 9752.000 3rd4th5thCSF 2522.000 CSFVol 666.000, OptChiasmVol 176.000 MaskVol 1528690.000 860 573 2028 2.850 0.699 0.144 0.040 21 1.5 G&S_frontomargin 1774 1168 4864 3.203 0.733 0.136 0.028 30 2.0 G&S_occipital_inf 1564 1035 3374 2.615 0.575 0.130 0.023 23 1.4 G&S_paracentral 1103 787 2674 2.811 0.744 0.139 0.031 19 1.4 G&S_subcentral 1122 795 4110 3.503 0.726 0.176 0.060 32 2.8 G&S_transv_frontopol 2795 1912 7373 3.468 0.631 0.117 0.028 33 3.3 G&S_cingul-Ant 1234 855 3370 3.358 0.673 0.127 0.027 15 1.3 G&S_cingul-Mid-Ant 1489 1004 3341 3.028 0.676 0.121 0.026 19 1.5 G&S_cingul-Mid-Post 690 431 2662 3.928 0.817 0.147 0.041 15 1.2 G_cingul-Post-dorsal 414 278 1284 3.218 0.716 0.148 0.033 9 0.5 G_cingul-Post-ventral 3570 2415 7351 2.382 0.589 0.147 0.038 64 5.7 G_cuneus 1203 844 4068 3.251 0.539 0.131 0.035 25 1.6 G_front_inf-Opercular 403 265 1455 3.390 0.481 0.129 0.027 7 0.3 G_front_inf-Orbital 915 675 3220 3.368 0.654 0.149 0.038 20 1.5 G_front_inf-Triangul 4011 2807 14337 3.270 0.684 0.155 0.044 105 6.9 G_front_middle 6842 4700 22778 3.469 0.747 0.139 0.039 143 11.8 G_front_sup 552 407 2360 4.486 0.641 0.116 0.025 4 0.6 G_Ins_lg&S_cent_ins 516 344 2691 4.443 0.721 0.126 0.043 6 1.1 G_insular_short 2191 1470 6352 3.129 0.704 0.142 0.035 43 2.9 G_occipital_middle 2349 1617 4782 2.469 0.524 0.147 0.041 42 3.6 G_occipital_sup 2317 1525 7007 3.288 0.598 0.135 0.033 42 3.0 G_oc-temp_lat-fusifor 3209 2223 6997 2.553 0.724 0.153 0.039 61 5.2 G_oc-temp_med-Lingual 1825 1234 5195 3.362 0.972 0.144 0.055 31 3.9 G_oc-temp_med-Parahip 2570 1748 8541 3.298 0.800 0.151 0.054 69 5.8 G_orbital 3264 2357 11692 3.418 0.656 0.153 0.045 79 5.4 G_pariet_inf-Angular 2186 1538 5718 3.038 0.665 0.140 0.036 45 3.2 G_pariet_inf-Supramar 3006 2053 8271 2.819 0.705 0.148 0.036 69 4.2 G_parietal_sup 2168 1436 4560 2.420 0.666 0.134 0.033 40 3.1 G_postcentral 3077 2070 8037 2.842 0.574 0.114 0.020 43 2.3 G_precentral 2249 1586 7106 3.206 0.745 0.145 0.036 55 3.5 G_precuneus 721 534 2721 3.293 0.998 0.164 0.065 27 1.5 G_rectus 421 280 837 2.943 0.952 0.078 0.029 3 0.3 G_subcallosal 497 328 1240 3.157 0.550 0.142 0.028 9 0.5 G_temp_sup-G_T_transv 1885 1373 6693 3.314 0.798 0.146 0.039 43 2.8 G_temp_sup-Lateral 1047 702 3091 3.957 0.610 0.096 0.024 10 0.9 G_temp_sup-Plan_polar 785 578 1889 2.624 0.586 0.109 0.019 15 0.7 G_temp_sup-Plan_tempo 1661 1175 6003 3.418 0.859 0.151 0.044 37 3.2 G_temporal_inf 2583 1808 8872 3.309 0.829 0.144 0.044 65 4.5 G_temporal_middle 374 260 705 2.875 0.550 0.094 0.015 2 0.2 Lat_Fis-ant-Horizont 208 160 385 2.626 0.356 0.086 0.014 1 0.1 Lat_Fis-ant-Vertical 1285 867 2313 3.337 0.516 0.108 0.019 8 1.0 Lat_Fis-post 4028 2628 6064 2.114 0.645 0.138 0.034 68 5.3 Pole_occipital 1632 1229 7223 3.484 0.793 0.153 0.048 40 3.2 Pole_temporal 3506 2500 5540 2.454 0.627 0.125 0.029 39 4.2 S_calcarine 3108 2089 3854 2.100 0.488 0.091 0.015 17 1.8 S_central 1434 986 2599 2.796 0.501 0.088 0.014 6 0.8 S_cingul-Marginalis 570 377 1058 3.340 0.440 0.080 0.015 2 0.3 S_circular_insula_ant 1015 682 1797 3.242 0.571 0.076 0.008 3 0.4 S_circular_insula_inf 1350 911 2509 3.142 0.596 0.096 0.017 6 1.0 S_circular_insula_sup 930 682 1697 2.535 0.597 0.114 0.023 8 0.9 S_collat_transv_ant 571 380 881 2.819 0.483 0.118 0.022 4 0.6 S_collat_transv_post 1887 1322 3543 2.837 0.521 0.117 0.021 18 1.4 S_front_inf 2284 1588 3983 2.495 0.559 0.121 0.025 20 2.5 S_front_middle 2525 1765 4627 2.580 0.512 0.100 0.015 17 1.7 S_front_sup 346 246 660 2.899 0.504 0.106 0.013 2 0.3 S_interm_prim-Jensen 3796 2644 6425 2.522 0.602 0.114 0.022 36 3.4 S_intrapariet&P_trans 1164 785 1788 2.608 0.552 0.111 0.018 8 1.0 S_oc_middle&Lunatus 1305 906 2144 2.547 0.515 0.125 0.019 16 1.1 S_oc_sup&transversal 967 659 1613 2.597 0.442 0.108 0.020 8 0.9 S_occipital_ant 816 586 1642 3.120 0.641 0.126 0.031 8 1.0 S_oc-temp_lat 2330 1580 3996 2.794 0.482 0.101 0.019 15 1.8 S_oc-temp_med&Lingual 485 348 813 2.603 0.460 0.115 0.019 3 0.4 S_orbital_lateral 647 449 1023 2.664 0.498 0.098 0.012 4 0.3 S_orbital_med-olfact 1323 916 2965 3.282 0.738 0.119 0.027 12 1.4 S_orbital-H_Shaped 3173 2218 5866 2.567 0.628 0.111 0.021 35 3.2 S_parieto_occipital 1460 937 1624 2.117 0.783 0.104 0.013 15 0.6 S_pericallosal 2528 1778 3848 2.279 0.505 0.101 0.016 17 1.6 S_postcentral 1511 1034 2709 2.916 0.448 0.080 0.011 5 0.7 S_precentral-inf-part 1764 1223 2709 2.497 0.462 0.103 0.017 11 1.4 S_precentral-sup-part 183 129 398 3.638 0.706 0.142 0.016 2 0.2 S_suborbital 1088 754 2216 2.863 0.701 0.092 0.015 5 0.6 S_subparietal 1202 826 2070 2.988 0.565 0.110 0.022 8 1.0 S_temporal_inf 5409 3801 11311 3.178 0.554 0.098 0.017 36 3.5 S_temporal_sup 236 182 358 2.338 0.553 0.142 0.016 3 0.2 S_temporal_transverse #----------------------------------------- #@# Cortical Parc 3 lh Thu 17 Nov 2022 09:05:38 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_ca_label -l ../label/lh.cortex.label -aseg ../mri/aseg.presurf.mgz -seed 1234 sub057 lh ../surf/lh.sphere.reg /opt/freesurfer/average/lh.DKTaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs ../label/lh.aparc.DKTatlas.annot setting seed for random number generator to 1234 using ../mri/aseg.presurf.mgz aseg volume to correct midline $Id: mris_ca_label.c,v 1.37 2014/02/04 17:46:42 fischl Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading atlas from /opt/freesurfer/average/lh.DKTaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs... reading color table from GCSA file.... average std = 1.4 using min determinant for regularization = 0.020 0 singular and 383 ill-conditioned covariance matrices regularized input 0: MEAN CURVATURE, flags 0, avgs 5, name mean_curvature labeling surface... 1356 labels changed using aseg relabeling using gibbs priors... 000: 1926 changed, 137924 examined... 001: 436 changed, 9116 examined... 002: 110 changed, 2459 examined... 003: 43 changed, 660 examined... 004: 18 changed, 252 examined... 005: 12 changed, 104 examined... 006: 8 changed, 60 examined... 007: 6 changed, 45 examined... 008: 4 changed, 34 examined... 009: 6 changed, 27 examined... 010: 5 changed, 30 examined... 011: 3 changed, 26 examined... 012: 1 changed, 21 examined... 013: 1 changed, 8 examined... 014: 1 changed, 7 examined... 015: 1 changed, 9 examined... 016: 1 changed, 7 examined... 017: 0 changed, 5 examined... 205 labels changed using aseg 000: 58 total segments, 25 labels (131 vertices) changed 001: 34 total segments, 1 labels (1 vertices) changed 002: 33 total segments, 0 labels (0 vertices) changed 10 filter iterations complete (10 requested, 13 changed) rationalizing unknown annotations with cortex label relabeling unknown label... relabeling corpuscallosum label... 1045 vertices marked for relabeling... 1045 labels changed in reclassification. writing output to ../label/lh.aparc.DKTatlas.annot... classification took 0 minutes and 12 seconds. #----------------------------------------- #@# Cortical Parc 3 rh Thu 17 Nov 2022 09:05:50 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_ca_label -l ../label/rh.cortex.label -aseg ../mri/aseg.presurf.mgz -seed 1234 sub057 rh ../surf/rh.sphere.reg /opt/freesurfer/average/rh.DKTaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs ../label/rh.aparc.DKTatlas.annot setting seed for random number generator to 1234 using ../mri/aseg.presurf.mgz aseg volume to correct midline $Id: mris_ca_label.c,v 1.37 2014/02/04 17:46:42 fischl Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading atlas from /opt/freesurfer/average/rh.DKTaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs... reading color table from GCSA file.... average std = 0.9 using min determinant for regularization = 0.009 0 singular and 325 ill-conditioned covariance matrices regularized input 0: MEAN CURVATURE, flags 0, avgs 5, name mean_curvature labeling surface... 1362 labels changed using aseg relabeling using gibbs priors... 000: 1927 changed, 136762 examined... 001: 433 changed, 9122 examined... 002: 107 changed, 2534 examined... 003: 38 changed, 651 examined... 004: 14 changed, 246 examined... 005: 10 changed, 88 examined... 006: 11 changed, 53 examined... 007: 7 changed, 47 examined... 008: 7 changed, 36 examined... 009: 4 changed, 38 examined... 010: 2 changed, 24 examined... 011: 3 changed, 14 examined... 012: 1 changed, 15 examined... 013: 0 changed, 5 examined... 135 labels changed using aseg 000: 69 total segments, 36 labels (212 vertices) changed 001: 34 total segments, 1 labels (2 vertices) changed 002: 33 total segments, 0 labels (0 vertices) changed 10 filter iterations complete (10 requested, 6 changed) rationalizing unknown annotations with cortex label relabeling unknown label... relabeling corpuscallosum label... 1170 vertices marked for relabeling... 1170 labels changed in reclassification. writing output to ../label/rh.aparc.DKTatlas.annot... classification took 0 minutes and 14 seconds. #----------------------------------------- #@# Parcellation Stats 3 lh Thu 17 Nov 2022 09:06:04 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_anatomical_stats -th3 -mgz -cortex ../label/lh.cortex.label -f ../stats/lh.aparc.DKTatlas.stats -b -a ../label/lh.aparc.DKTatlas.annot -c ../label/aparc.annot.DKTatlas.ctab sub057 lh white computing statistics for each annotation in ../label/lh.aparc.DKTatlas.annot. reading volume /home/shenkang/Desktop/T1/RESULTS/sub057/mri/wm.mgz... reading input surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white... reading input pial surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.pial... reading input white surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white... INFO: using TH3 volume calc INFO: assuming MGZ format for volumes. INFO: using ../label/lh.cortex.label as mask to calc cortex NumVert, SurfArea and MeanThickness. Using TH3 vertex volume calc Total face volume 320019 Total vertex volume 315722 (mask=0) reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Saving annotation colortable ../label/aparc.annot.DKTatlas.ctab table columns are: number of vertices total surface area (mm^2) total gray matter volume (mm^3) average cortical thickness +- standard deviation (mm) integrated rectified mean curvature integrated rectified Gaussian curvature folding index intrinsic curvature index structure name atlas_icv (eTIV) = 1451720 mm^3 (det: 1.341929 ) lhCtxGM: 314458.849 314212.000 diff= 246.8 pctdiff= 0.078 rhCtxGM: 311706.989 311551.000 diff= 156.0 pctdiff= 0.050 lhCtxWM: 184609.376 185288.000 diff= -678.6 pctdiff=-0.368 rhCtxWM: 184172.173 183864.000 diff= 308.2 pctdiff= 0.167 SubCortGMVol 60685.000 SupraTentVol 1067623.387 (1065380.000) diff=2243.387 pctdiff=0.210 SupraTentVolNotVent 1057871.387 (1055628.000) diff=2243.387 pctdiff=0.212 BrainSegVol 1200395.000 (1198539.000) diff=1856.000 pctdiff=0.155 BrainSegVolNotVent 1188121.000 (1187977.387) diff=143.613 pctdiff=0.012 BrainSegVolNotVent 1188121.000 CerebellumVol 132317.000 VentChorVol 9752.000 3rd4th5thCSF 2522.000 CSFVol 666.000, OptChiasmVol 176.000 MaskVol 1528690.000 1419 947 3604 3.516 0.851 0.118 0.026 18 1.4 caudalanteriorcingulate 3482 2331 8439 3.046 0.627 0.111 0.022 36 3.1 caudalmiddlefrontal 4578 3235 9120 2.425 0.675 0.135 0.034 79 6.7 cuneus 509 362 1919 4.045 0.589 0.117 0.030 5 0.7 entorhinal 4275 2898 10355 3.128 0.594 0.136 0.030 71 5.7 fusiform 5787 4032 14159 2.926 0.639 0.126 0.026 91 6.3 inferiorparietal 4842 3360 13346 3.087 0.793 0.130 0.033 78 6.9 inferiortemporal 1770 1174 4212 2.989 1.092 0.124 0.031 27 1.9 isthmuscingulate 8531 5803 15971 2.385 0.646 0.143 0.032 134 11.6 lateraloccipital 3854 2661 10101 3.301 0.723 0.140 0.036 68 6.0 lateralorbitofrontal 5519 3865 9972 2.455 0.663 0.144 0.033 86 8.2 lingual 2090 1427 6406 3.453 0.836 0.117 0.029 30 2.1 medialorbitofrontal 6053 4231 17469 3.309 0.654 0.122 0.027 89 6.4 middletemporal 1015 689 2757 3.379 0.756 0.094 0.017 7 0.6 parahippocampal 2488 1715 5298 2.799 0.564 0.114 0.021 28 1.8 paracentral 2316 1585 5805 3.138 0.491 0.124 0.026 36 2.3 parsopercularis 1085 744 3200 3.399 0.554 0.119 0.024 19 1.0 parsorbitalis 2492 1723 6687 3.287 0.575 0.128 0.027 33 2.8 parstriangularis 2728 1909 3426 2.043 0.534 0.126 0.027 32 3.3 pericalcarine 7348 5018 14288 2.448 0.760 0.124 0.024 97 7.6 postcentral 1931 1340 4688 2.982 0.952 0.120 0.024 24 1.8 posteriorcingulate 7736 5247 16426 2.802 0.562 0.114 0.021 80 6.5 precentral 5586 3921 13130 2.828 0.629 0.127 0.030 90 6.8 precuneus 1798 1239 5184 3.492 0.792 0.138 0.029 31 2.1 rostralanteriorcingulate 5330 3730 13464 2.939 0.605 0.134 0.033 103 6.9 rostralmiddlefrontal 11072 7744 31441 3.246 0.714 0.129 0.028 159 12.5 superiorfrontal 7433 5150 15136 2.490 0.569 0.123 0.024 113 7.0 superiorparietal 8098 5566 23556 3.461 0.706 0.116 0.023 101 7.9 superiortemporal 6014 4276 15709 3.047 0.647 0.135 0.031 94 7.7 supramarginal 848 542 1928 3.067 0.561 0.119 0.023 12 0.7 transversetemporal 2622 1812 8524 4.067 0.765 0.101 0.024 17 2.6 insula #----------------------------------------- #@# Parcellation Stats 3 rh Thu 17 Nov 2022 09:07:27 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts mris_anatomical_stats -th3 -mgz -cortex ../label/rh.cortex.label -f ../stats/rh.aparc.DKTatlas.stats -b -a ../label/rh.aparc.DKTatlas.annot -c ../label/aparc.annot.DKTatlas.ctab sub057 rh white computing statistics for each annotation in ../label/rh.aparc.DKTatlas.annot. reading volume /home/shenkang/Desktop/T1/RESULTS/sub057/mri/wm.mgz... reading input surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white... reading input pial surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.pial... reading input white surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white... INFO: using TH3 volume calc INFO: assuming MGZ format for volumes. INFO: using ../label/rh.cortex.label as mask to calc cortex NumVert, SurfArea and MeanThickness. Using TH3 vertex volume calc Total face volume 318049 Total vertex volume 313899 (mask=0) reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Saving annotation colortable ../label/aparc.annot.DKTatlas.ctab table columns are: number of vertices total surface area (mm^2) total gray matter volume (mm^3) average cortical thickness +- standard deviation (mm) integrated rectified mean curvature integrated rectified Gaussian curvature folding index intrinsic curvature index structure name atlas_icv (eTIV) = 1451720 mm^3 (det: 1.341929 ) lhCtxGM: 314458.849 314212.000 diff= 246.8 pctdiff= 0.078 rhCtxGM: 311706.989 311551.000 diff= 156.0 pctdiff= 0.050 lhCtxWM: 184609.376 185288.000 diff= -678.6 pctdiff=-0.368 rhCtxWM: 184172.173 183864.000 diff= 308.2 pctdiff= 0.167 SubCortGMVol 60685.000 SupraTentVol 1067623.387 (1065380.000) diff=2243.387 pctdiff=0.210 SupraTentVolNotVent 1057871.387 (1055628.000) diff=2243.387 pctdiff=0.212 BrainSegVol 1200395.000 (1198539.000) diff=1856.000 pctdiff=0.155 BrainSegVolNotVent 1188121.000 (1187977.387) diff=143.613 pctdiff=0.012 BrainSegVolNotVent 1188121.000 CerebellumVol 132317.000 VentChorVol 9752.000 3rd4th5thCSF 2522.000 CSFVol 666.000, OptChiasmVol 176.000 MaskVol 1528690.000 1095 704 2896 3.175 0.883 0.128 0.022 16 1.0 caudalanteriorcingulate 3364 2347 8688 3.061 0.669 0.115 0.024 34 3.2 caudalmiddlefrontal 4527 3103 9273 2.439 0.586 0.136 0.033 70 6.5 cuneus 627 412 2147 3.221 1.111 0.145 0.060 11 1.4 entorhinal 4388 3003 11298 3.095 0.621 0.129 0.031 65 5.5 fusiform 7509 5302 20558 3.178 0.618 0.129 0.031 112 9.2 inferiorparietal 4065 2886 11612 3.194 0.801 0.137 0.038 69 6.2 inferiortemporal 1568 1044 3688 2.846 1.029 0.122 0.027 21 1.5 isthmuscingulate 9254 6155 18353 2.621 0.748 0.132 0.030 139 11.2 lateraloccipital 4312 2934 11298 3.267 0.789 0.136 0.042 84 7.7 lateralorbitofrontal 5228 3622 9748 2.514 0.677 0.139 0.033 77 7.2 lingual 2219 1557 6625 3.327 0.935 0.134 0.046 50 3.9 medialorbitofrontal 5434 3825 15060 3.257 0.746 0.127 0.033 91 7.1 middletemporal 1102 731 2560 2.984 0.608 0.098 0.019 9 0.6 parahippocampal 2580 1755 5675 2.825 0.552 0.121 0.021 31 2.2 paracentral 1993 1408 5368 3.048 0.505 0.113 0.027 28 1.9 parsopercularis 953 662 2677 3.148 0.551 0.131 0.029 13 1.1 parsorbitalis 2198 1556 5795 3.098 0.643 0.134 0.030 34 2.7 parstriangularis 3017 2167 4437 2.121 0.527 0.140 0.035 47 4.4 pericalcarine 6383 4328 11402 2.305 0.692 0.117 0.024 83 6.1 postcentral 1934 1309 4798 3.050 0.964 0.125 0.027 29 2.1 posteriorcingulate 7384 4985 15335 2.701 0.585 0.105 0.018 72 5.4 precentral 6381 4395 14797 2.891 0.731 0.117 0.024 86 6.5 precuneus 910 602 2524 3.552 0.720 0.098 0.029 11 1.1 rostralanteriorcingulate 6389 4421 16401 2.861 0.705 0.142 0.037 123 9.6 rostralmiddlefrontal 12486 8641 34559 3.216 0.772 0.127 0.033 194 17.5 superiorfrontal 7793 5433 16557 2.525 0.630 0.132 0.029 129 8.9 superiorparietal 6861 4829 19787 3.351 0.769 0.114 0.027 94 7.2 superiortemporal 4441 3107 10731 3.018 0.656 0.130 0.029 76 5.3 supramarginal 526 352 1237 3.153 0.483 0.138 0.029 9 0.5 transversetemporal 2587 1785 8013 3.840 0.783 0.104 0.021 16 2.2 insula #----------------------------------------- #@# WM/GM Contrast lh Thu 17 Nov 2022 09:08:21 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts pctsurfcon --s sub057 --lh-only Log file is /home/shenkang/Desktop/T1/RESULTS/sub057/scripts/pctsurfcon.log Thu 17 Nov 2022 09:08:21 AM CST setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/scripts /opt/freesurfer/bin/pctsurfcon $Id: pctsurfcon,v 1.15 2016/02/12 21:43:15 zkaufman Exp $ Linux shenkang-B560M-AORUS-ELITE 5.15.0-46-generic #49~20.04.1-Ubuntu SMP Thu Aug 4 19:15:44 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux FREESURFER_HOME /opt/freesurfer mri_vol2surf --mov /home/shenkang/Desktop/T1/RESULTS/sub057/mri/rawavg.mgz --hemi lh --noreshape --interp trilinear --projdist -1 --o /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp.pctsurfcon.464716/lh.wm.mgh --regheader sub057 --cortex srcvol = /home/shenkang/Desktop/T1/RESULTS/sub057/mri/rawavg.mgz srcreg unspecified srcregold = 0 srcwarp unspecified surf = white hemi = lh ProjDist = -1 reshape = 0 interp = trilinear float2int = round GetProjMax = 0 INFO: float2int code = 0 Done loading volume Computing registration from header. Using /home/shenkang/Desktop/T1/RESULTS/sub057/mri/orig.mgz as target reference. -------- original matrix ----------- -0.99843 0.04223 -0.03682 0.00000; -0.03237 0.10167 0.99429 -0.00002; -0.04573 -0.99392 0.10014 0.00002; 0.00000 0.00000 0.00000 1.00000; -------- original matrix ----------- Loading label /home/shenkang/Desktop/T1/RESULTS/sub057/label/lh.cortex.label Reading surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Done reading source surface Mapping Source Volume onto Source Subject Surface 1 -1 -1 -1 using old Done mapping volume to surface Number of source voxels hit = 96195 Masking with /home/shenkang/Desktop/T1/RESULTS/sub057/label/lh.cortex.label Writing to /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp.pctsurfcon.464716/lh.wm.mgh Dim: 137924 1 1 mri_vol2surf --mov /home/shenkang/Desktop/T1/RESULTS/sub057/mri/rawavg.mgz --hemi lh --noreshape --interp trilinear --o /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp.pctsurfcon.464716/lh.gm.mgh --projfrac 0.3 --regheader sub057 --cortex srcvol = /home/shenkang/Desktop/T1/RESULTS/sub057/mri/rawavg.mgz srcreg unspecified srcregold = 0 srcwarp unspecified surf = white hemi = lh ProjFrac = 0.3 thickness = thickness reshape = 0 interp = trilinear float2int = round GetProjMax = 0 INFO: float2int code = 0 Done loading volume Computing registration from header. Using /home/shenkang/Desktop/T1/RESULTS/sub057/mri/orig.mgz as target reference. -------- original matrix ----------- -0.99843 0.04223 -0.03682 0.00000; -0.03237 0.10167 0.99429 -0.00002; -0.04573 -0.99392 0.10014 0.00002; 0.00000 0.00000 0.00000 1.00000; -------- original matrix ----------- Loading label /home/shenkang/Desktop/T1/RESULTS/sub057/label/lh.cortex.label Reading surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Done reading source surface Reading thickness /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.thickness Done Mapping Source Volume onto Source Subject Surface 1 0.3 0.3 0.3 using old Done mapping volume to surface Number of source voxels hit = 113202 Masking with /home/shenkang/Desktop/T1/RESULTS/sub057/label/lh.cortex.label Writing to /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp.pctsurfcon.464716/lh.gm.mgh Dim: 137924 1 1 mri_concat /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp.pctsurfcon.464716/lh.wm.mgh /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp.pctsurfcon.464716/lh.gm.mgh --paired-diff-norm --mul 100 --o /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.w-g.pct.mgh ninputs = 2 Checking inputs nframestot = 2 Allocing output Done allocing Combining pairs nframes = 1 Multiplying by 100.000000 Writing to /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.w-g.pct.mgh mri_segstats --in /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.w-g.pct.mgh --annot sub057 lh aparc --sum /home/shenkang/Desktop/T1/RESULTS/sub057/stats/lh.w-g.pct.stats --snr $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $ cwd cmdline mri_segstats --in /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.w-g.pct.mgh --annot sub057 lh aparc --sum /home/shenkang/Desktop/T1/RESULTS/sub057/stats/lh.w-g.pct.stats --snr sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang UseRobust 0 Constructing seg from annotation Reading annotation /home/shenkang/Desktop/T1/RESULTS/sub057/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 1000 Loading /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.w-g.pct.mgh Vertex Area is 0.688699 mm^3 Generating list of segmentation ids Found 36 segmentations Computing statistics for each segmentation Reporting on 35 segmentations Using PrintSegStat mri_segstats done Cleaning up #----------------------------------------- #@# WM/GM Contrast rh Thu 17 Nov 2022 09:08:27 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/scripts pctsurfcon --s sub057 --rh-only Log file is /home/shenkang/Desktop/T1/RESULTS/sub057/scripts/pctsurfcon.log Thu 17 Nov 2022 09:08:27 AM CST setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/scripts /opt/freesurfer/bin/pctsurfcon $Id: pctsurfcon,v 1.15 2016/02/12 21:43:15 zkaufman Exp $ Linux shenkang-B560M-AORUS-ELITE 5.15.0-46-generic #49~20.04.1-Ubuntu SMP Thu Aug 4 19:15:44 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux FREESURFER_HOME /opt/freesurfer mri_vol2surf --mov /home/shenkang/Desktop/T1/RESULTS/sub057/mri/rawavg.mgz --hemi rh --noreshape --interp trilinear --projdist -1 --o /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp.pctsurfcon.464880/rh.wm.mgh --regheader sub057 --cortex srcvol = /home/shenkang/Desktop/T1/RESULTS/sub057/mri/rawavg.mgz srcreg unspecified srcregold = 0 srcwarp unspecified surf = white hemi = rh ProjDist = -1 reshape = 0 interp = trilinear float2int = round GetProjMax = 0 INFO: float2int code = 0 Done loading volume Computing registration from header. Using /home/shenkang/Desktop/T1/RESULTS/sub057/mri/orig.mgz as target reference. -------- original matrix ----------- -0.99843 0.04223 -0.03682 0.00000; -0.03237 0.10167 0.99429 -0.00002; -0.04573 -0.99392 0.10014 0.00002; 0.00000 0.00000 0.00000 1.00000; -------- original matrix ----------- Loading label /home/shenkang/Desktop/T1/RESULTS/sub057/label/rh.cortex.label Reading surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Done reading source surface Mapping Source Volume onto Source Subject Surface 1 -1 -1 -1 using old Done mapping volume to surface Number of source voxels hit = 95678 Masking with /home/shenkang/Desktop/T1/RESULTS/sub057/label/rh.cortex.label Writing to /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp.pctsurfcon.464880/rh.wm.mgh Dim: 136762 1 1 mri_vol2surf --mov /home/shenkang/Desktop/T1/RESULTS/sub057/mri/rawavg.mgz --hemi rh --noreshape --interp trilinear --o /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp.pctsurfcon.464880/rh.gm.mgh --projfrac 0.3 --regheader sub057 --cortex srcvol = /home/shenkang/Desktop/T1/RESULTS/sub057/mri/rawavg.mgz srcreg unspecified srcregold = 0 srcwarp unspecified surf = white hemi = rh ProjFrac = 0.3 thickness = thickness reshape = 0 interp = trilinear float2int = round GetProjMax = 0 INFO: float2int code = 0 Done loading volume Computing registration from header. Using /home/shenkang/Desktop/T1/RESULTS/sub057/mri/orig.mgz as target reference. -------- original matrix ----------- -0.99843 0.04223 -0.03682 0.00000; -0.03237 0.10167 0.99429 -0.00002; -0.04573 -0.99392 0.10014 0.00002; 0.00000 0.00000 0.00000 1.00000; -------- original matrix ----------- Loading label /home/shenkang/Desktop/T1/RESULTS/sub057/label/rh.cortex.label Reading surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Done reading source surface Reading thickness /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.thickness Done Mapping Source Volume onto Source Subject Surface 1 0.3 0.3 0.3 using old Done mapping volume to surface Number of source voxels hit = 112053 Masking with /home/shenkang/Desktop/T1/RESULTS/sub057/label/rh.cortex.label Writing to /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp.pctsurfcon.464880/rh.gm.mgh Dim: 136762 1 1 mri_concat /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp.pctsurfcon.464880/rh.wm.mgh /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp.pctsurfcon.464880/rh.gm.mgh --paired-diff-norm --mul 100 --o /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.w-g.pct.mgh ninputs = 2 Checking inputs nframestot = 2 Allocing output Done allocing Combining pairs nframes = 1 Multiplying by 100.000000 Writing to /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.w-g.pct.mgh mri_segstats --in /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.w-g.pct.mgh --annot sub057 rh aparc --sum /home/shenkang/Desktop/T1/RESULTS/sub057/stats/rh.w-g.pct.stats --snr $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $ cwd cmdline mri_segstats --in /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.w-g.pct.mgh --annot sub057 rh aparc --sum /home/shenkang/Desktop/T1/RESULTS/sub057/stats/rh.w-g.pct.stats --snr sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang UseRobust 0 Constructing seg from annotation Reading annotation /home/shenkang/Desktop/T1/RESULTS/sub057/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 2000 Loading /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.w-g.pct.mgh Vertex Area is 0.68853 mm^3 Generating list of segmentation ids Found 36 segmentations Computing statistics for each segmentation Reporting on 35 segmentations Using PrintSegStat mri_segstats done Cleaning up #----------------------------------------- #@# Relabel Hypointensities Thu 17 Nov 2022 09:08:32 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/mri mri_relabel_hypointensities aseg.presurf.mgz ../surf aseg.presurf.hypos.mgz reading input surface ../surf/lh.white... relabeling lh hypointensities... 1030 voxels changed to hypointensity... reading input surface ../surf/rh.white... relabeling rh hypointensities... 916 voxels changed to hypointensity... 1980 hypointense voxels neighboring cortex changed #----------------------------------------- #@# AParc-to-ASeg aparc Thu 17 Nov 2022 09:09:00 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057 mri_aparc2aseg --s sub057 --volmask --aseg aseg.presurf.hypos --relabel mri/norm.mgz mri/transforms/talairach.m3z /opt/freesurfer/average/RB_all_2016-05-10.vc700.gca mri/aseg.auto_noCCseg.label_intensities.txt relabeling unlikely voxels interior to white matter surface: norm: mri/norm.mgz XFORM: mri/transforms/talairach.m3z GCA: /opt/freesurfer/average/RB_all_2016-05-10.vc700.gca label intensities: mri/aseg.auto_noCCseg.label_intensities.txt SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS subject sub057 outvol /home/shenkang/Desktop/T1/RESULTS/sub057/mri/aparc+aseg.mgz useribbon 0 baseoffset 0 RipUnknown 0 Reading lh white surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading lh pial surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.pial Loading lh annotations from /home/shenkang/Desktop/T1/RESULTS/sub057/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Reading rh white surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading rh pial surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.pial Loading rh annotations from /home/shenkang/Desktop/T1/RESULTS/sub057/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Have color table for lh white annotation Have color table for rh white annotation Loading ribbon segmentation from /home/shenkang/Desktop/T1/RESULTS/sub057/mri/ribbon.mgz Building hash of lh white Building hash of lh pial Building hash of rh white Building hash of rh pial Loading aseg from /home/shenkang/Desktop/T1/RESULTS/sub057/mri/aseg.presurf.hypos.mgz ASeg Vox2RAS: ----------- -1.00000 0.00000 0.00000 128.00000; 0.00000 0.00000 1.00000 -128.00000; 0.00000 -1.00000 0.00000 128.00000; 0.00000 0.00000 0.00000 1.00000; ------------------------- Labeling Slice relabeling unlikely voxels in interior of white matter setting orig areas to linear transform determinant scaled 6.13 reading 47 labels from mri/aseg.auto_noCCseg.label_intensities.txt rescaling Left_Cerebral_White_Matter from 107 --> 106 rescaling Left_Cerebral_Cortex from 61 --> 57 rescaling Left_Lateral_Ventricle from 13 --> 7 rescaling Left_Inf_Lat_Vent from 34 --> 33 rescaling Left_Cerebellum_White_Matter from 86 --> 90 rescaling Left_Cerebellum_Cortex from 60 --> 60 rescaling Left_Thalamus from 94 --> 95 rescaling Left_Thalamus_Proper from 84 --> 87 rescaling Left_Caudate from 75 --> 73 rescaling Left_Putamen from 80 --> 79 rescaling Left_Pallidum from 98 --> 88 rescaling Third_Ventricle from 25 --> 11 rescaling Fourth_Ventricle from 22 --> 6 rescaling Brain_Stem from 81 --> 85 rescaling Left_Hippocampus from 57 --> 57 rescaling Left_Amygdala from 56 --> 57 rescaling CSF from 32 --> 17 rescaling Left_Accumbens_area from 62 --> 58 rescaling Left_VentralDC from 87 --> 88 rescaling Right_Cerebral_White_Matter from 105 --> 104 rescaling Right_Cerebral_Cortex from 58 --> 56 rescaling Right_Lateral_Ventricle from 13 --> 7 rescaling Right_Inf_Lat_Vent from 25 --> 24 rescaling Right_Cerebellum_White_Matter from 87 --> 89 rescaling Right_Cerebellum_Cortex from 59 --> 59 rescaling Right_Thalamus_Proper from 85 --> 83 rescaling Right_Caudate from 62 --> 69 rescaling Right_Putamen from 80 --> 73 rescaling Right_Pallidum from 97 --> 86 rescaling Right_Hippocampus from 53 --> 59 rescaling Right_Amygdala from 55 --> 60 rescaling Right_Accumbens_area from 65 --> 68 rescaling Right_VentralDC from 86 --> 92 rescaling Fifth_Ventricle from 40 --> 15 rescaling WM_hypointensities from 78 --> 78 rescaling non_WM_hypointensities from 40 --> 44 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 nctx = 625075 Used brute-force search on 0 voxels relabeling unlikely voxels in interior of white matter average std[0] = 7.3 pass 1: 142 changed. pass 2: 11 changed. pass 3: 2 changed. pass 4: 0 changed. nchanged = 0 Writing output aseg to /home/shenkang/Desktop/T1/RESULTS/sub057/mri/aparc+aseg.mgz #----------------------------------------- #@# AParc-to-ASeg a2009s Thu 17 Nov 2022 09:14:37 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057 mri_aparc2aseg --s sub057 --volmask --aseg aseg.presurf.hypos --relabel mri/norm.mgz mri/transforms/talairach.m3z /opt/freesurfer/average/RB_all_2016-05-10.vc700.gca mri/aseg.auto_noCCseg.label_intensities.txt --a2009s relabeling unlikely voxels interior to white matter surface: norm: mri/norm.mgz XFORM: mri/transforms/talairach.m3z GCA: /opt/freesurfer/average/RB_all_2016-05-10.vc700.gca label intensities: mri/aseg.auto_noCCseg.label_intensities.txt SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS subject sub057 outvol /home/shenkang/Desktop/T1/RESULTS/sub057/mri/aparc.a2009s+aseg.mgz useribbon 0 baseoffset 10100 RipUnknown 0 Reading lh white surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading lh pial surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.pial Loading lh annotations from /home/shenkang/Desktop/T1/RESULTS/sub057/label/lh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Reading rh white surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading rh pial surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.pial Loading rh annotations from /home/shenkang/Desktop/T1/RESULTS/sub057/label/rh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Have color table for lh white annotation Have color table for rh white annotation Loading ribbon segmentation from /home/shenkang/Desktop/T1/RESULTS/sub057/mri/ribbon.mgz Building hash of lh white Building hash of lh pial Building hash of rh white Building hash of rh pial Loading aseg from /home/shenkang/Desktop/T1/RESULTS/sub057/mri/aseg.presurf.hypos.mgz ASeg Vox2RAS: ----------- -1.00000 0.00000 0.00000 128.00000; 0.00000 0.00000 1.00000 -128.00000; 0.00000 -1.00000 0.00000 128.00000; 0.00000 0.00000 0.00000 1.00000; ------------------------- Labeling Slice relabeling unlikely voxels in interior of white matter setting orig areas to linear transform determinant scaled 6.13 reading 47 labels from mri/aseg.auto_noCCseg.label_intensities.txt rescaling Left_Cerebral_White_Matter from 107 --> 106 rescaling Left_Cerebral_Cortex from 61 --> 57 rescaling Left_Lateral_Ventricle from 13 --> 7 rescaling Left_Inf_Lat_Vent from 34 --> 33 rescaling Left_Cerebellum_White_Matter from 86 --> 90 rescaling Left_Cerebellum_Cortex from 60 --> 60 rescaling Left_Thalamus from 94 --> 95 rescaling Left_Thalamus_Proper from 84 --> 87 rescaling Left_Caudate from 75 --> 73 rescaling Left_Putamen from 80 --> 79 rescaling Left_Pallidum from 98 --> 88 rescaling Third_Ventricle from 25 --> 11 rescaling Fourth_Ventricle from 22 --> 6 rescaling Brain_Stem from 81 --> 85 rescaling Left_Hippocampus from 57 --> 57 rescaling Left_Amygdala from 56 --> 57 rescaling CSF from 32 --> 17 rescaling Left_Accumbens_area from 62 --> 58 rescaling Left_VentralDC from 87 --> 88 rescaling Right_Cerebral_White_Matter from 105 --> 104 rescaling Right_Cerebral_Cortex from 58 --> 56 rescaling Right_Lateral_Ventricle from 13 --> 7 rescaling Right_Inf_Lat_Vent from 25 --> 24 rescaling Right_Cerebellum_White_Matter from 87 --> 89 rescaling Right_Cerebellum_Cortex from 59 --> 59 rescaling Right_Thalamus_Proper from 85 --> 83 rescaling Right_Caudate from 62 --> 69 rescaling Right_Putamen from 80 --> 73 rescaling Right_Pallidum from 97 --> 86 rescaling Right_Hippocampus from 53 --> 59 rescaling Right_Amygdala from 55 --> 60 rescaling Right_Accumbens_area from 65 --> 68 rescaling Right_VentralDC from 86 --> 92 rescaling Fifth_Ventricle from 40 --> 15 rescaling WM_hypointensities from 78 --> 78 rescaling non_WM_hypointensities from 40 --> 44 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 nctx = 625009 Used brute-force search on 0 voxels relabeling unlikely voxels in interior of white matter average std[0] = 7.3 pass 1: 142 changed. pass 2: 11 changed. pass 3: 2 changed. pass 4: 0 changed. nchanged = 0 Writing output aseg to /home/shenkang/Desktop/T1/RESULTS/sub057/mri/aparc.a2009s+aseg.mgz #----------------------------------------- #@# AParc-to-ASeg DKTatlas Thu 17 Nov 2022 09:20:56 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057 mri_aparc2aseg --s sub057 --volmask --aseg aseg.presurf.hypos --relabel mri/norm.mgz mri/transforms/talairach.m3z /opt/freesurfer/average/RB_all_2016-05-10.vc700.gca mri/aseg.auto_noCCseg.label_intensities.txt --annot aparc.DKTatlas --o mri/aparc.DKTatlas+aseg.mgz relabeling unlikely voxels interior to white matter surface: norm: mri/norm.mgz XFORM: mri/transforms/talairach.m3z GCA: /opt/freesurfer/average/RB_all_2016-05-10.vc700.gca label intensities: mri/aseg.auto_noCCseg.label_intensities.txt SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS subject sub057 outvol mri/aparc.DKTatlas+aseg.mgz useribbon 0 baseoffset 0 RipUnknown 0 Reading lh white surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading lh pial surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.pial Loading lh annotations from /home/shenkang/Desktop/T1/RESULTS/sub057/label/lh.aparc.DKTatlas.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Reading rh white surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading rh pial surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.pial Loading rh annotations from /home/shenkang/Desktop/T1/RESULTS/sub057/label/rh.aparc.DKTatlas.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Have color table for lh white annotation Have color table for rh white annotation Loading ribbon segmentation from /home/shenkang/Desktop/T1/RESULTS/sub057/mri/ribbon.mgz Building hash of lh white Building hash of lh pial Building hash of rh white Building hash of rh pial Loading aseg from /home/shenkang/Desktop/T1/RESULTS/sub057/mri/aseg.presurf.hypos.mgz ASeg Vox2RAS: ----------- -1.00000 0.00000 0.00000 128.00000; 0.00000 0.00000 1.00000 -128.00000; 0.00000 -1.00000 0.00000 128.00000; 0.00000 0.00000 0.00000 1.00000; ------------------------- Labeling Slice relabeling unlikely voxels in interior of white matter setting orig areas to linear transform determinant scaled 6.13 reading 47 labels from mri/aseg.auto_noCCseg.label_intensities.txt rescaling Left_Cerebral_White_Matter from 107 --> 106 rescaling Left_Cerebral_Cortex from 61 --> 57 rescaling Left_Lateral_Ventricle from 13 --> 7 rescaling Left_Inf_Lat_Vent from 34 --> 33 rescaling Left_Cerebellum_White_Matter from 86 --> 90 rescaling Left_Cerebellum_Cortex from 60 --> 60 rescaling Left_Thalamus from 94 --> 95 rescaling Left_Thalamus_Proper from 84 --> 87 rescaling Left_Caudate from 75 --> 73 rescaling Left_Putamen from 80 --> 79 rescaling Left_Pallidum from 98 --> 88 rescaling Third_Ventricle from 25 --> 11 rescaling Fourth_Ventricle from 22 --> 6 rescaling Brain_Stem from 81 --> 85 rescaling Left_Hippocampus from 57 --> 57 rescaling Left_Amygdala from 56 --> 57 rescaling CSF from 32 --> 17 rescaling Left_Accumbens_area from 62 --> 58 rescaling Left_VentralDC from 87 --> 88 rescaling Right_Cerebral_White_Matter from 105 --> 104 rescaling Right_Cerebral_Cortex from 58 --> 56 rescaling Right_Lateral_Ventricle from 13 --> 7 rescaling Right_Inf_Lat_Vent from 25 --> 24 rescaling Right_Cerebellum_White_Matter from 87 --> 89 rescaling Right_Cerebellum_Cortex from 59 --> 59 rescaling Right_Thalamus_Proper from 85 --> 83 rescaling Right_Caudate from 62 --> 69 rescaling Right_Putamen from 80 --> 73 rescaling Right_Pallidum from 97 --> 86 rescaling Right_Hippocampus from 53 --> 59 rescaling Right_Amygdala from 55 --> 60 rescaling Right_Accumbens_area from 65 --> 68 rescaling Right_VentralDC from 86 --> 92 rescaling Fifth_Ventricle from 40 --> 15 rescaling WM_hypointensities from 78 --> 78 rescaling non_WM_hypointensities from 40 --> 44 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 nctx = 625009 Used brute-force search on 0 voxels relabeling unlikely voxels in interior of white matter average std[0] = 7.3 pass 1: 142 changed. pass 2: 11 changed. pass 3: 2 changed. pass 4: 0 changed. nchanged = 0 Writing output aseg to mri/aparc.DKTatlas+aseg.mgz #----------------------------------------- #@# APas-to-ASeg Thu 17 Nov 2022 09:24:55 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/mri apas2aseg --i aparc+aseg.mgz --o aseg.mgz Thu 17 Nov 2022 09:24:55 AM CST setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/mri /opt/freesurfer/bin/apas2aseg --i aparc+aseg.mgz --o aseg.mgz freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c $Id: apas2aseg,v 1.2 2016/02/12 21:43:14 zkaufman Exp $ Linux shenkang-B560M-AORUS-ELITE 5.15.0-46-generic #49~20.04.1-Ubuntu SMP Thu Aug 4 19:15:44 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux mri_binarize --i aparc+aseg.mgz --o aseg.mgz --replace 1000 3 --replace 2000 42 --replace 1001 3 --replace 2001 42 --replace 1002 3 --replace 2002 42 --replace 1003 3 --replace 2003 42 --replace 1004 3 --replace 2004 42 --replace 1005 3 --replace 2005 42 --replace 1006 3 --replace 2006 42 --replace 1007 3 --replace 2007 42 --replace 1008 3 --replace 2008 42 --replace 1009 3 --replace 2009 42 --replace 1010 3 --replace 2010 42 --replace 1011 3 --replace 2011 42 --replace 1012 3 --replace 2012 42 --replace 1013 3 --replace 2013 42 --replace 1014 3 --replace 2014 42 --replace 1015 3 --replace 2015 42 --replace 1016 3 --replace 2016 42 --replace 1017 3 --replace 2017 42 --replace 1018 3 --replace 2018 42 --replace 1019 3 --replace 2019 42 --replace 1020 3 --replace 2020 42 --replace 1021 3 --replace 2021 42 --replace 1022 3 --replace 2022 42 --replace 1023 3 --replace 2023 42 --replace 1024 3 --replace 2024 42 --replace 1025 3 --replace 2025 42 --replace 1026 3 --replace 2026 42 --replace 1027 3 --replace 2027 42 --replace 1028 3 --replace 2028 42 --replace 1029 3 --replace 2029 42 --replace 1030 3 --replace 2030 42 --replace 1031 3 --replace 2031 42 --replace 1032 3 --replace 2032 42 --replace 1033 3 --replace 2033 42 --replace 1034 3 --replace 2034 42 --replace 1035 3 --replace 2035 42 $Id: mri_binarize.c,v 1.43 2016/06/09 20:46:21 greve Exp $ cwd /home/shenkang/Desktop/T1/RESULTS/sub057/mri cmdline mri_binarize.bin --i aparc+aseg.mgz --o aseg.mgz --replace 1000 3 --replace 2000 42 --replace 1001 3 --replace 2001 42 --replace 1002 3 --replace 2002 42 --replace 1003 3 --replace 2003 42 --replace 1004 3 --replace 2004 42 --replace 1005 3 --replace 2005 42 --replace 1006 3 --replace 2006 42 --replace 1007 3 --replace 2007 42 --replace 1008 3 --replace 2008 42 --replace 1009 3 --replace 2009 42 --replace 1010 3 --replace 2010 42 --replace 1011 3 --replace 2011 42 --replace 1012 3 --replace 2012 42 --replace 1013 3 --replace 2013 42 --replace 1014 3 --replace 2014 42 --replace 1015 3 --replace 2015 42 --replace 1016 3 --replace 2016 42 --replace 1017 3 --replace 2017 42 --replace 1018 3 --replace 2018 42 --replace 1019 3 --replace 2019 42 --replace 1020 3 --replace 2020 42 --replace 1021 3 --replace 2021 42 --replace 1022 3 --replace 2022 42 --replace 1023 3 --replace 2023 42 --replace 1024 3 --replace 2024 42 --replace 1025 3 --replace 2025 42 --replace 1026 3 --replace 2026 42 --replace 1027 3 --replace 2027 42 --replace 1028 3 --replace 2028 42 --replace 1029 3 --replace 2029 42 --replace 1030 3 --replace 2030 42 --replace 1031 3 --replace 2031 42 --replace 1032 3 --replace 2032 42 --replace 1033 3 --replace 2033 42 --replace 1034 3 --replace 2034 42 --replace 1035 3 --replace 2035 42 sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang input aparc+aseg.mgz frame 0 nErode3d 0 nErode2d 0 output aseg.mgz Binarizing based on threshold min -infinity max +infinity binval 1 binvalnot 0 fstart = 0, fend = 0, nframes = 1 Replacing 72 1: 1000 3 2: 2000 42 3: 1001 3 4: 2001 42 5: 1002 3 6: 2002 42 7: 1003 3 8: 2003 42 9: 1004 3 10: 2004 42 11: 1005 3 12: 2005 42 13: 1006 3 14: 2006 42 15: 1007 3 16: 2007 42 17: 1008 3 18: 2008 42 19: 1009 3 20: 2009 42 21: 1010 3 22: 2010 42 23: 1011 3 24: 2011 42 25: 1012 3 26: 2012 42 27: 1013 3 28: 2013 42 29: 1014 3 30: 2014 42 31: 1015 3 32: 2015 42 33: 1016 3 34: 2016 42 35: 1017 3 36: 2017 42 37: 1018 3 38: 2018 42 39: 1019 3 40: 2019 42 41: 1020 3 42: 2020 42 43: 1021 3 44: 2021 42 45: 1022 3 46: 2022 42 47: 1023 3 48: 2023 42 49: 1024 3 50: 2024 42 51: 1025 3 52: 2025 42 53: 1026 3 54: 2026 42 55: 1027 3 56: 2027 42 57: 1028 3 58: 2028 42 59: 1029 3 60: 2029 42 61: 1030 3 62: 2030 42 63: 1031 3 64: 2031 42 65: 1032 3 66: 2032 42 67: 1033 3 68: 2033 42 69: 1034 3 70: 2034 42 71: 1035 3 72: 2035 42 Found 0 values in range Counting number of voxels in first frame Found 0 voxels in final mask Count: 0 0.000000 16777216 0.000000 mri_binarize done Started at Thu 17 Nov 2022 09:24:55 AM CST Ended at Thu 17 Nov 2022 09:25:00 AM CST Apas2aseg-Run-Time-Sec 5 apas2aseg Done #-------------------------------------------- #@# ASeg Stats Thu 17 Nov 2022 09:25:00 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057 mri_segstats --seg mri/aseg.mgz --sum stats/aseg.stats --pv mri/norm.mgz --empty --brainmask mri/brainmask.mgz --brain-vol-from-seg --excludeid 0 --excl-ctxgmwm --supratent --subcortgray --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --etiv --surf-wm-vol --surf-ctx-vol --totalgray --euler --ctab /opt/freesurfer/ASegStatsLUT.txt --subject sub057 $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $ cwd cmdline mri_segstats --seg mri/aseg.mgz --sum stats/aseg.stats --pv mri/norm.mgz --empty --brainmask mri/brainmask.mgz --brain-vol-from-seg --excludeid 0 --excl-ctxgmwm --supratent --subcortgray --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --etiv --surf-wm-vol --surf-ctx-vol --totalgray --euler --ctab /opt/freesurfer/ASegStatsLUT.txt --subject sub057 sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang UseRobust 0 atlas_icv (eTIV) = 1451720 mm^3 (det: 1.341929 ) Computing euler number orig.nofix lheno = -46, rheno = -58 orig.nofix lhholes = 24, rhholes = 30 Loading mri/aseg.mgz Getting Brain Volume Statistics lhCtxGM: 314458.849 314212.000 diff= 246.8 pctdiff= 0.078 rhCtxGM: 311706.989 311551.000 diff= 156.0 pctdiff= 0.050 lhCtxWM: 184609.376 185288.000 diff= -678.6 pctdiff=-0.368 rhCtxWM: 184172.173 183864.000 diff= 308.2 pctdiff= 0.167 SubCortGMVol 60685.000 SupraTentVol 1067623.387 (1065380.000) diff=2243.387 pctdiff=0.210 SupraTentVolNotVent 1057871.387 (1055628.000) diff=2243.387 pctdiff=0.212 BrainSegVol 1200395.000 (1198539.000) diff=1856.000 pctdiff=0.155 BrainSegVolNotVent 1188121.000 (1187977.387) diff=143.613 pctdiff=0.012 BrainSegVolNotVent 1188121.000 CerebellumVol 132317.000 VentChorVol 9752.000 3rd4th5thCSF 2522.000 CSFVol 666.000, OptChiasmVol 176.000 MaskVol 1528690.000 Loading mri/norm.mgz Loading mri/norm.mgz Voxel Volume is 1 mm^3 Generating list of segmentation ids Found 50 segmentations Computing statistics for each segmentation Reporting on 45 segmentations Using PrintSegStat mri_segstats done #----------------------------------------- #@# WMParc Thu 17 Nov 2022 09:29:03 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057 mri_aparc2aseg --s sub057 --labelwm --hypo-as-wm --rip-unknown --volmask --o mri/wmparc.mgz --ctxseg aparc+aseg.mgz SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS subject sub057 outvol mri/wmparc.mgz useribbon 0 baseoffset 0 labeling wm labeling hypo-intensities as wm dmaxctx 5.000000 RipUnknown 1 CtxSeg /home/shenkang/Desktop/T1/RESULTS/sub057/mri/aparc+aseg.mgz Reading lh white surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading lh pial surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.pial Loading lh annotations from /home/shenkang/Desktop/T1/RESULTS/sub057/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Reading rh white surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading rh pial surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.pial Loading rh annotations from /home/shenkang/Desktop/T1/RESULTS/sub057/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Have color table for lh white annotation Have color table for rh white annotation Loading ribbon segmentation from /home/shenkang/Desktop/T1/RESULTS/sub057/mri/ribbon.mgz Loading filled from /home/shenkang/Desktop/T1/RESULTS/sub057/mri/ribbon.mgz Ripping vertices labeled as unkown Ripped 7244 vertices from left hemi Ripped 7257 vertices from right hemi Building hash of lh white Building hash of lh pial Building hash of rh white Building hash of rh pial Loading aseg from /home/shenkang/Desktop/T1/RESULTS/sub057/mri/aseg.mgz Loading Ctx Seg File /home/shenkang/Desktop/T1/RESULTS/sub057/mri/aparc+aseg.mgz ASeg Vox2RAS: ----------- -1.00000 0.00000 0.00000 128.00000; 0.00000 0.00000 1.00000 -128.00000; 0.00000 -1.00000 0.00000 128.00000; 0.00000 0.00000 0.00000 1.00000; ------------------------- Labeling Slice 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 nctx = 992287 Used brute-force search on 37 voxels Fixing Parahip LH WM Found 2 clusters 0 k 1.000000 1 k 1173.000000 Fixing Parahip RH WM Found 14 clusters 0 k 1.000000 1 k 1.000000 2 k 1.000000 3 k 1.000000 4 k 1202.000000 5 k 1.000000 6 k 1.000000 7 k 2.000000 8 k 1.000000 9 k 1.000000 10 k 1.000000 11 k 1.000000 12 k 8.000000 13 k 1.000000 Writing output aseg to mri/wmparc.mgz mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject sub057 --surf-wm-vol --ctab /opt/freesurfer/WMParcStatsLUT.txt --etiv $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $ cwd cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject sub057 --surf-wm-vol --ctab /opt/freesurfer/WMParcStatsLUT.txt --etiv sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang UseRobust 0 atlas_icv (eTIV) = 1451720 mm^3 (det: 1.341929 ) Loading mri/wmparc.mgz Getting Brain Volume Statistics lhCtxGM: 314458.849 314212.000 diff= 246.8 pctdiff= 0.078 rhCtxGM: 311706.989 311551.000 diff= 156.0 pctdiff= 0.050 lhCtxWM: 184609.376 185288.000 diff= -678.6 pctdiff=-0.368 rhCtxWM: 184172.173 183864.000 diff= 308.2 pctdiff= 0.167 SubCortGMVol 60685.000 SupraTentVol 1067623.387 (1065380.000) diff=2243.387 pctdiff=0.210 SupraTentVolNotVent 1057871.387 (1055628.000) diff=2243.387 pctdiff=0.212 BrainSegVol 1200395.000 (1198539.000) diff=1856.000 pctdiff=0.155 BrainSegVolNotVent 1188121.000 (1187977.387) diff=143.613 pctdiff=0.012 BrainSegVolNotVent 1188121.000 CerebellumVol 132317.000 VentChorVol 9752.000 3rd4th5thCSF 2522.000 CSFVol 666.000, OptChiasmVol 176.000 MaskVol 1528690.000 Loading mri/norm.mgz Loading mri/norm.mgz Voxel Volume is 1 mm^3 Generating list of segmentation ids Found 390 segmentations Computing statistics for each segmentation Reporting on 70 segmentations Using PrintSegStat mri_segstats done /home/shenkang/Desktop/T1/RESULTS/sub057/label #-------------------------------------------- #@# BA_exvivo Labels lh Thu 17 Nov 2022 09:40:26 AM CST mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA1_exvivo.label --trgsubject sub057 --trglabel ./lh.BA1_exvivo.label --hemi lh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA1_exvivo.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./lh.BA1_exvivo.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 4129 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 4129 nlabel points Performing mapping from target back to the source label 137924 Number of reverse mapping hits = 281 Checking for and removing duplicates Writing label file ./lh.BA1_exvivo.label 4410 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA2_exvivo.label --trgsubject sub057 --trglabel ./lh.BA2_exvivo.label --hemi lh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA2_exvivo.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./lh.BA2_exvivo.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 7909 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 7909 nlabel points Performing mapping from target back to the source label 137924 Number of reverse mapping hits = 449 Checking for and removing duplicates Writing label file ./lh.BA2_exvivo.label 8358 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA3a_exvivo.label --trgsubject sub057 --trglabel ./lh.BA3a_exvivo.label --hemi lh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA3a_exvivo.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./lh.BA3a_exvivo.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 4077 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 4077 nlabel points Performing mapping from target back to the source label 137924 Number of reverse mapping hits = 166 Checking for and removing duplicates Writing label file ./lh.BA3a_exvivo.label 4243 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA3b_exvivo.label --trgsubject sub057 --trglabel ./lh.BA3b_exvivo.label --hemi lh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA3b_exvivo.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./lh.BA3b_exvivo.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 5983 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 5983 nlabel points Performing mapping from target back to the source label 137924 Number of reverse mapping hits = 378 Checking for and removing duplicates Writing label file ./lh.BA3b_exvivo.label 6361 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA4a_exvivo.label --trgsubject sub057 --trglabel ./lh.BA4a_exvivo.label --hemi lh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA4a_exvivo.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./lh.BA4a_exvivo.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 5784 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 5784 nlabel points Performing mapping from target back to the source label 137924 Number of reverse mapping hits = 299 Checking for and removing duplicates Writing label file ./lh.BA4a_exvivo.label 6083 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA4p_exvivo.label --trgsubject sub057 --trglabel ./lh.BA4p_exvivo.label --hemi lh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA4p_exvivo.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./lh.BA4p_exvivo.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 4070 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 4070 nlabel points Performing mapping from target back to the source label 137924 Number of reverse mapping hits = 158 Checking for and removing duplicates Writing label file ./lh.BA4p_exvivo.label 4228 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA6_exvivo.label --trgsubject sub057 --trglabel ./lh.BA6_exvivo.label --hemi lh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA6_exvivo.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./lh.BA6_exvivo.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 13589 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 13589 nlabel points Performing mapping from target back to the source label 137924 Number of reverse mapping hits = 1295 Checking for and removing duplicates Writing label file ./lh.BA6_exvivo.label 14884 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA44_exvivo.label --trgsubject sub057 --trglabel ./lh.BA44_exvivo.label --hemi lh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA44_exvivo.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./lh.BA44_exvivo.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 4181 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 4181 nlabel points Performing mapping from target back to the source label 137924 Number of reverse mapping hits = 444 Checking for and removing duplicates Writing label file ./lh.BA44_exvivo.label 4625 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA45_exvivo.label --trgsubject sub057 --trglabel ./lh.BA45_exvivo.label --hemi lh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA45_exvivo.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./lh.BA45_exvivo.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 3422 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 3422 nlabel points Performing mapping from target back to the source label 137924 Number of reverse mapping hits = 709 Checking for and removing duplicates Writing label file ./lh.BA45_exvivo.label 4131 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.V1_exvivo.label --trgsubject sub057 --trglabel ./lh.V1_exvivo.label --hemi lh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.V1_exvivo.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./lh.V1_exvivo.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 4641 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 4641 nlabel points Performing mapping from target back to the source label 137924 Number of reverse mapping hits = 2396 Checking for and removing duplicates Writing label file ./lh.V1_exvivo.label 7037 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.V2_exvivo.label --trgsubject sub057 --trglabel ./lh.V2_exvivo.label --hemi lh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.V2_exvivo.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./lh.V2_exvivo.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 8114 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 8114 nlabel points Performing mapping from target back to the source label 137924 Number of reverse mapping hits = 4350 Checking for and removing duplicates Writing label file ./lh.V2_exvivo.label 12464 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.MT_exvivo.label --trgsubject sub057 --trglabel ./lh.MT_exvivo.label --hemi lh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.MT_exvivo.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./lh.MT_exvivo.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 2018 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 2018 nlabel points Performing mapping from target back to the source label 137924 Number of reverse mapping hits = 477 Checking for and removing duplicates Writing label file ./lh.MT_exvivo.label 2495 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.entorhinal_exvivo.label --trgsubject sub057 --trglabel ./lh.entorhinal_exvivo.label --hemi lh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.entorhinal_exvivo.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./lh.entorhinal_exvivo.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 1290 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 1290 nlabel points Performing mapping from target back to the source label 137924 Number of reverse mapping hits = 75 Checking for and removing duplicates Writing label file ./lh.entorhinal_exvivo.label 1365 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.perirhinal_exvivo.label --trgsubject sub057 --trglabel ./lh.perirhinal_exvivo.label --hemi lh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.perirhinal_exvivo.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./lh.perirhinal_exvivo.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 1199 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 1199 nlabel points Performing mapping from target back to the source label 137924 Number of reverse mapping hits = 96 Checking for and removing duplicates Writing label file ./lh.perirhinal_exvivo.label 1295 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA1_exvivo.thresh.label --trgsubject sub057 --trglabel ./lh.BA1_exvivo.thresh.label --hemi lh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA1_exvivo.thresh.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./lh.BA1_exvivo.thresh.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 1014 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 1014 nlabel points Performing mapping from target back to the source label 137924 Number of reverse mapping hits = 96 Checking for and removing duplicates Writing label file ./lh.BA1_exvivo.thresh.label 1110 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA2_exvivo.thresh.label --trgsubject sub057 --trglabel ./lh.BA2_exvivo.thresh.label --hemi lh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA2_exvivo.thresh.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./lh.BA2_exvivo.thresh.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 2092 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 2092 nlabel points Performing mapping from target back to the source label 137924 Number of reverse mapping hits = 124 Checking for and removing duplicates Writing label file ./lh.BA2_exvivo.thresh.label 2216 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA3a_exvivo.thresh.label --trgsubject sub057 --trglabel ./lh.BA3a_exvivo.thresh.label --hemi lh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA3a_exvivo.thresh.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./lh.BA3a_exvivo.thresh.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 1504 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 1504 nlabel points Performing mapping from target back to the source label 137924 Number of reverse mapping hits = 49 Checking for and removing duplicates Writing label file ./lh.BA3a_exvivo.thresh.label 1553 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA3b_exvivo.thresh.label --trgsubject sub057 --trglabel ./lh.BA3b_exvivo.thresh.label --hemi lh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA3b_exvivo.thresh.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./lh.BA3b_exvivo.thresh.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 1996 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 1996 nlabel points Performing mapping from target back to the source label 137924 Number of reverse mapping hits = 139 Checking for and removing duplicates Writing label file ./lh.BA3b_exvivo.thresh.label 2135 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA4a_exvivo.thresh.label --trgsubject sub057 --trglabel ./lh.BA4a_exvivo.thresh.label --hemi lh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA4a_exvivo.thresh.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./lh.BA4a_exvivo.thresh.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 2319 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 2319 nlabel points Performing mapping from target back to the source label 137924 Number of reverse mapping hits = 101 Checking for and removing duplicates Writing label file ./lh.BA4a_exvivo.thresh.label 2420 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA4p_exvivo.thresh.label --trgsubject sub057 --trglabel ./lh.BA4p_exvivo.thresh.label --hemi lh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA4p_exvivo.thresh.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./lh.BA4p_exvivo.thresh.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 1549 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 1549 nlabel points Performing mapping from target back to the source label 137924 Number of reverse mapping hits = 41 Checking for and removing duplicates Writing label file ./lh.BA4p_exvivo.thresh.label 1590 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA6_exvivo.thresh.label --trgsubject sub057 --trglabel ./lh.BA6_exvivo.thresh.label --hemi lh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA6_exvivo.thresh.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./lh.BA6_exvivo.thresh.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 7035 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 7035 nlabel points Performing mapping from target back to the source label 137924 Number of reverse mapping hits = 576 Checking for and removing duplicates Writing label file ./lh.BA6_exvivo.thresh.label 7611 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA44_exvivo.thresh.label --trgsubject sub057 --trglabel ./lh.BA44_exvivo.thresh.label --hemi lh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA44_exvivo.thresh.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./lh.BA44_exvivo.thresh.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 1912 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 1912 nlabel points Performing mapping from target back to the source label 137924 Number of reverse mapping hits = 161 Checking for and removing duplicates Writing label file ./lh.BA44_exvivo.thresh.label 2073 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA45_exvivo.thresh.label --trgsubject sub057 --trglabel ./lh.BA45_exvivo.thresh.label --hemi lh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.BA45_exvivo.thresh.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./lh.BA45_exvivo.thresh.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 1151 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 1151 nlabel points Performing mapping from target back to the source label 137924 Number of reverse mapping hits = 342 Checking for and removing duplicates Writing label file ./lh.BA45_exvivo.thresh.label 1493 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.V1_exvivo.thresh.label --trgsubject sub057 --trglabel ./lh.V1_exvivo.thresh.label --hemi lh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.V1_exvivo.thresh.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./lh.V1_exvivo.thresh.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 3405 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 3405 nlabel points Performing mapping from target back to the source label 137924 Number of reverse mapping hits = 1746 Checking for and removing duplicates Writing label file ./lh.V1_exvivo.thresh.label 5151 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.V2_exvivo.thresh.label --trgsubject sub057 --trglabel ./lh.V2_exvivo.thresh.label --hemi lh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.V2_exvivo.thresh.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./lh.V2_exvivo.thresh.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 3334 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 3334 nlabel points Performing mapping from target back to the source label 137924 Number of reverse mapping hits = 2010 Checking for and removing duplicates Writing label file ./lh.V2_exvivo.thresh.label 5344 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.MT_exvivo.thresh.label --trgsubject sub057 --trglabel ./lh.MT_exvivo.thresh.label --hemi lh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.MT_exvivo.thresh.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./lh.MT_exvivo.thresh.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 513 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 513 nlabel points Performing mapping from target back to the source label 137924 Number of reverse mapping hits = 132 Checking for and removing duplicates Writing label file ./lh.MT_exvivo.thresh.label 645 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.entorhinal_exvivo.thresh.label --trgsubject sub057 --trglabel ./lh.entorhinal_exvivo.thresh.label --hemi lh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.entorhinal_exvivo.thresh.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./lh.entorhinal_exvivo.thresh.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 470 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 470 nlabel points Performing mapping from target back to the source label 137924 Number of reverse mapping hits = 30 Checking for and removing duplicates Writing label file ./lh.entorhinal_exvivo.thresh.label 500 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.perirhinal_exvivo.thresh.label --trgsubject sub057 --trglabel ./lh.perirhinal_exvivo.thresh.label --hemi lh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/lh.perirhinal_exvivo.thresh.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./lh.perirhinal_exvivo.thresh.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 450 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 450 nlabel points Performing mapping from target back to the source label 137924 Number of reverse mapping hits = 41 Checking for and removing duplicates Writing label file ./lh.perirhinal_exvivo.thresh.label 491 mri_label2label: Done mris_label2annot --s sub057 --hemi lh --ctab /opt/freesurfer/average/colortable_BA.txt --l lh.BA1_exvivo.label --l lh.BA2_exvivo.label --l lh.BA3a_exvivo.label --l lh.BA3b_exvivo.label --l lh.BA4a_exvivo.label --l lh.BA4p_exvivo.label --l lh.BA6_exvivo.label --l lh.BA44_exvivo.label --l lh.BA45_exvivo.label --l lh.V1_exvivo.label --l lh.V2_exvivo.label --l lh.MT_exvivo.label --l lh.entorhinal_exvivo.label --l lh.perirhinal_exvivo.label --a BA_exvivo --maxstatwinner --noverbose Reading ctab /opt/freesurfer/average/colortable_BA.txt Number of ctab entries 15 $Id: mris_label2annot.c,v 1.20 2016/01/07 23:28:11 greve Exp $ cwd /home/shenkang/Desktop/T1/RESULTS/sub057/label cmdline mris_label2annot --s sub057 --hemi lh --ctab /opt/freesurfer/average/colortable_BA.txt --l lh.BA1_exvivo.label --l lh.BA2_exvivo.label --l lh.BA3a_exvivo.label --l lh.BA3b_exvivo.label --l lh.BA4a_exvivo.label --l lh.BA4p_exvivo.label --l lh.BA6_exvivo.label --l lh.BA44_exvivo.label --l lh.BA45_exvivo.label --l lh.V1_exvivo.label --l lh.V2_exvivo.label --l lh.MT_exvivo.label --l lh.entorhinal_exvivo.label --l lh.perirhinal_exvivo.label --a BA_exvivo --maxstatwinner --noverbose sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang subject sub057 hemi lh SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS ColorTable /opt/freesurfer/average/colortable_BA.txt AnnotName BA_exvivo nlables 14 LabelThresh 0 0.000000 Loading /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.orig 1 1530880 BA1_exvivo 2 16749699 BA2_exvivo 3 16711680 BA3a_exvivo 4 3368703 BA3b_exvivo 5 1376196 BA4a_exvivo 6 13382655 BA4p_exvivo 7 10036737 BA6_exvivo 8 2490521 BA44_exvivo 9 39283 BA45_exvivo 10 3993 V1_exvivo 11 8508928 V2_exvivo 12 10027163 MT_exvivo 13 16422433 perirhinal_exvivo 14 16392598 entorhinal_exvivo Mapping unhit to unknown Found 92687 unhit vertices Writing annot to /home/shenkang/Desktop/T1/RESULTS/sub057/label/lh.BA_exvivo.annot mris_label2annot --s sub057 --hemi lh --ctab /opt/freesurfer/average/colortable_BA.txt --l lh.BA1_exvivo.thresh.label --l lh.BA2_exvivo.thresh.label --l lh.BA3a_exvivo.thresh.label --l lh.BA3b_exvivo.thresh.label --l lh.BA4a_exvivo.thresh.label --l lh.BA4p_exvivo.thresh.label --l lh.BA6_exvivo.thresh.label --l lh.BA44_exvivo.thresh.label --l lh.BA45_exvivo.thresh.label --l lh.V1_exvivo.thresh.label --l lh.V2_exvivo.thresh.label --l lh.MT_exvivo.thresh.label --l lh.entorhinal_exvivo.thresh.label --l lh.perirhinal_exvivo.thresh.label --a BA_exvivo.thresh --maxstatwinner --noverbose Reading ctab /opt/freesurfer/average/colortable_BA.txt Number of ctab entries 15 $Id: mris_label2annot.c,v 1.20 2016/01/07 23:28:11 greve Exp $ cwd /home/shenkang/Desktop/T1/RESULTS/sub057/label cmdline mris_label2annot --s sub057 --hemi lh --ctab /opt/freesurfer/average/colortable_BA.txt --l lh.BA1_exvivo.thresh.label --l lh.BA2_exvivo.thresh.label --l lh.BA3a_exvivo.thresh.label --l lh.BA3b_exvivo.thresh.label --l lh.BA4a_exvivo.thresh.label --l lh.BA4p_exvivo.thresh.label --l lh.BA6_exvivo.thresh.label --l lh.BA44_exvivo.thresh.label --l lh.BA45_exvivo.thresh.label --l lh.V1_exvivo.thresh.label --l lh.V2_exvivo.thresh.label --l lh.MT_exvivo.thresh.label --l lh.entorhinal_exvivo.thresh.label --l lh.perirhinal_exvivo.thresh.label --a BA_exvivo.thresh --maxstatwinner --noverbose sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang subject sub057 hemi lh SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS ColorTable /opt/freesurfer/average/colortable_BA.txt AnnotName BA_exvivo.thresh nlables 14 LabelThresh 0 0.000000 Loading /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.orig 1 1530880 BA1_exvivo 2 16749699 BA2_exvivo 3 16711680 BA3a_exvivo 4 3368703 BA3b_exvivo 5 1376196 BA4a_exvivo 6 13382655 BA4p_exvivo 7 10036737 BA6_exvivo 8 2490521 BA44_exvivo 9 39283 BA45_exvivo 10 3993 V1_exvivo 11 8508928 V2_exvivo 12 10027163 MT_exvivo 13 16422433 perirhinal_exvivo 14 16392598 entorhinal_exvivo Mapping unhit to unknown Found 111006 unhit vertices Writing annot to /home/shenkang/Desktop/T1/RESULTS/sub057/label/lh.BA_exvivo.thresh.annot mris_anatomical_stats -th3 -mgz -f ../stats/lh.BA_exvivo.stats -b -a ./lh.BA_exvivo.annot -c ./BA_exvivo.ctab sub057 lh white computing statistics for each annotation in ./lh.BA_exvivo.annot. reading volume /home/shenkang/Desktop/T1/RESULTS/sub057/mri/wm.mgz... reading input surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white... reading input pial surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.pial... reading input white surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white... INFO: using TH3 volume calc INFO: assuming MGZ format for volumes. Using TH3 vertex volume calc Total face volume 320019 Total vertex volume 315722 (mask=0) reading colortable from annotation file... colortable with 15 entries read (originally /opt/freesurfer/average/colortable_BA.txt) Saving annotation colortable ./BA_exvivo.ctab table columns are: number of vertices total surface area (mm^2) total gray matter volume (mm^3) average cortical thickness +- standard deviation (mm) integrated rectified mean curvature integrated rectified Gaussian curvature folding index intrinsic curvature index structure name atlas_icv (eTIV) = 1451720 mm^3 (det: 1.341929 ) lhCtxGM: 314458.849 314212.000 diff= 246.8 pctdiff= 0.078 rhCtxGM: 311706.989 311551.000 diff= 156.0 pctdiff= 0.050 lhCtxWM: 184609.376 185288.000 diff= -678.6 pctdiff=-0.368 rhCtxWM: 184172.173 183864.000 diff= 308.2 pctdiff= 0.167 SubCortGMVol 60685.000 SupraTentVol 1067623.387 (1065380.000) diff=2243.387 pctdiff=0.210 SupraTentVolNotVent 1057871.387 (1055628.000) diff=2243.387 pctdiff=0.212 BrainSegVol 1200395.000 (1198539.000) diff=1856.000 pctdiff=0.155 BrainSegVolNotVent 1188121.000 (1187977.387) diff=143.613 pctdiff=0.012 BrainSegVolNotVent 1188121.000 CerebellumVol 132317.000 VentChorVol 9752.000 3rd4th5thCSF 2522.000 CSFVol 666.000, OptChiasmVol 176.000 MaskVol 1528690.000 1150 767 2781 2.624 0.597 0.156 0.036 26 1.8 BA1_exvivo 3956 2715 7706 2.520 0.614 0.117 0.022 44 3.6 BA2_exvivo 1129 760 1254 2.055 0.483 0.125 0.025 10 1.1 BA3a_exvivo 2610 1744 4685 2.279 0.824 0.111 0.020 31 2.2 BA3b_exvivo 1642 1116 3685 2.806 0.475 0.118 0.021 21 1.2 BA4a_exvivo 1285 875 2262 2.591 0.417 0.099 0.015 8 0.7 BA4p_exvivo 9829 6734 25417 3.052 0.648 0.125 0.026 139 9.7 BA6_exvivo 2405 1663 5902 3.070 0.532 0.114 0.021 30 2.1 BA44_exvivo 3128 2183 8066 3.109 0.651 0.129 0.027 49 3.5 BA45_exvivo 4673 3302 6420 1.987 0.561 0.140 0.032 70 6.5 V1_exvivo 10022 6958 18716 2.402 0.650 0.145 0.036 172 15.2 V2_exvivo 2134 1454 4831 2.836 0.638 0.140 0.031 33 2.7 MT_exvivo 590 389 2215 3.938 0.629 0.098 0.030 5 0.8 perirhinal_exvivo 684 503 2298 3.715 0.760 0.146 0.042 14 1.3 entorhinal_exvivo mris_anatomical_stats -th3 -mgz -f ../stats/lh.BA_exvivo.thresh.stats -b -a ./lh.BA_exvivo.thresh.annot -c ./BA_exvivo.thresh.ctab sub057 lh white computing statistics for each annotation in ./lh.BA_exvivo.thresh.annot. reading volume /home/shenkang/Desktop/T1/RESULTS/sub057/mri/wm.mgz... reading input surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white... reading input pial surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.pial... reading input white surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white... INFO: using TH3 volume calc INFO: assuming MGZ format for volumes. Using TH3 vertex volume calc Total face volume 320019 Total vertex volume 315722 (mask=0) reading colortable from annotation file... colortable with 15 entries read (originally /opt/freesurfer/average/colortable_BA.txt) Saving annotation colortable ./BA_exvivo.thresh.ctab table columns are: number of vertices total surface area (mm^2) total gray matter volume (mm^3) average cortical thickness +- standard deviation (mm) integrated rectified mean curvature integrated rectified Gaussian curvature folding index intrinsic curvature index structure name atlas_icv (eTIV) = 1451720 mm^3 (det: 1.341929 ) lhCtxGM: 314458.849 314212.000 diff= 246.8 pctdiff= 0.078 rhCtxGM: 311706.989 311551.000 diff= 156.0 pctdiff= 0.050 lhCtxWM: 184609.376 185288.000 diff= -678.6 pctdiff=-0.368 rhCtxWM: 184172.173 183864.000 diff= 308.2 pctdiff= 0.167 SubCortGMVol 60685.000 SupraTentVol 1067623.387 (1065380.000) diff=2243.387 pctdiff=0.210 SupraTentVolNotVent 1057871.387 (1055628.000) diff=2243.387 pctdiff=0.212 BrainSegVol 1200395.000 (1198539.000) diff=1856.000 pctdiff=0.155 BrainSegVolNotVent 1188121.000 (1187977.387) diff=143.613 pctdiff=0.012 BrainSegVolNotVent 1188121.000 CerebellumVol 132317.000 VentChorVol 9752.000 3rd4th5thCSF 2522.000 CSFVol 666.000, OptChiasmVol 176.000 MaskVol 1528690.000 742 475 1725 2.543 0.645 0.151 0.033 15 1.1 BA1_exvivo 1530 1045 3044 2.458 0.588 0.115 0.023 18 1.6 BA2_exvivo 944 645 982 1.987 0.434 0.134 0.029 9 1.1 BA3a_exvivo 1584 1080 2172 1.868 0.525 0.095 0.015 13 0.9 BA3b_exvivo 1541 1071 3273 2.703 0.439 0.101 0.015 12 1.0 BA4a_exvivo 1052 711 1811 2.573 0.437 0.101 0.016 7 0.6 BA4p_exvivo 5416 3711 13250 2.912 0.597 0.128 0.027 82 5.4 BA6_exvivo 1486 1041 3733 3.090 0.446 0.121 0.023 22 1.3 BA44_exvivo 1362 927 3937 3.210 0.593 0.144 0.033 24 2.0 BA45_exvivo 4919 3474 6927 1.987 0.554 0.137 0.031 70 6.8 V1_exvivo 5096 3514 9029 2.328 0.591 0.148 0.040 93 8.4 V2_exvivo 582 395 1332 2.786 0.619 0.140 0.030 10 0.7 MT_exvivo 287 191 1173 3.979 0.612 0.063 0.012 1 0.1 perirhinal_exvivo 377 265 1144 3.933 0.710 0.144 0.038 7 0.6 entorhinal_exvivo #-------------------------------------------- #@# BA_exvivo Labels rh Thu 17 Nov 2022 09:43:54 AM CST mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA1_exvivo.label --trgsubject sub057 --trglabel ./rh.BA1_exvivo.label --hemi rh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA1_exvivo.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./rh.BA1_exvivo.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 3962 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Rescaling ... original radius = 99.9999 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 3962 nlabel points Performing mapping from target back to the source label 136762 Number of reverse mapping hits = 252 Checking for and removing duplicates Writing label file ./rh.BA1_exvivo.label 4214 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA2_exvivo.label --trgsubject sub057 --trglabel ./rh.BA2_exvivo.label --hemi rh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA2_exvivo.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./rh.BA2_exvivo.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 6687 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Rescaling ... original radius = 99.9999 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 6687 nlabel points Performing mapping from target back to the source label 136762 Number of reverse mapping hits = 363 Checking for and removing duplicates Writing label file ./rh.BA2_exvivo.label 7050 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA3a_exvivo.label --trgsubject sub057 --trglabel ./rh.BA3a_exvivo.label --hemi rh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA3a_exvivo.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./rh.BA3a_exvivo.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 3980 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Rescaling ... original radius = 99.9999 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 3980 nlabel points Performing mapping from target back to the source label 136762 Number of reverse mapping hits = 131 Checking for and removing duplicates Writing label file ./rh.BA3a_exvivo.label 4111 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA3b_exvivo.label --trgsubject sub057 --trglabel ./rh.BA3b_exvivo.label --hemi rh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA3b_exvivo.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./rh.BA3b_exvivo.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 4522 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Rescaling ... original radius = 99.9999 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 4522 nlabel points Performing mapping from target back to the source label 136762 Number of reverse mapping hits = 247 Checking for and removing duplicates Writing label file ./rh.BA3b_exvivo.label 4769 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA4a_exvivo.label --trgsubject sub057 --trglabel ./rh.BA4a_exvivo.label --hemi rh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA4a_exvivo.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./rh.BA4a_exvivo.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 5747 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Rescaling ... original radius = 99.9999 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 5747 nlabel points Performing mapping from target back to the source label 136762 Number of reverse mapping hits = 419 Checking for and removing duplicates Writing label file ./rh.BA4a_exvivo.label 6166 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA4p_exvivo.label --trgsubject sub057 --trglabel ./rh.BA4p_exvivo.label --hemi rh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA4p_exvivo.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./rh.BA4p_exvivo.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 4473 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Rescaling ... original radius = 99.9999 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 4473 nlabel points Performing mapping from target back to the source label 136762 Number of reverse mapping hits = 197 Checking for and removing duplicates Writing label file ./rh.BA4p_exvivo.label 4670 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA6_exvivo.label --trgsubject sub057 --trglabel ./rh.BA6_exvivo.label --hemi rh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA6_exvivo.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./rh.BA6_exvivo.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 12256 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Rescaling ... original radius = 99.9999 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 12256 nlabel points Performing mapping from target back to the source label 136762 Number of reverse mapping hits = 1177 Checking for and removing duplicates Writing label file ./rh.BA6_exvivo.label 13433 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA44_exvivo.label --trgsubject sub057 --trglabel ./rh.BA44_exvivo.label --hemi rh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA44_exvivo.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./rh.BA44_exvivo.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 6912 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Rescaling ... original radius = 99.9999 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 6912 nlabel points Performing mapping from target back to the source label 136762 Number of reverse mapping hits = 540 Checking for and removing duplicates Writing label file ./rh.BA44_exvivo.label 7452 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA45_exvivo.label --trgsubject sub057 --trglabel ./rh.BA45_exvivo.label --hemi rh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA45_exvivo.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./rh.BA45_exvivo.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 5355 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Rescaling ... original radius = 99.9999 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 5355 nlabel points Performing mapping from target back to the source label 136762 Number of reverse mapping hits = 782 Checking for and removing duplicates Writing label file ./rh.BA45_exvivo.label 6137 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.V1_exvivo.label --trgsubject sub057 --trglabel ./rh.V1_exvivo.label --hemi rh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.V1_exvivo.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./rh.V1_exvivo.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 4727 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Rescaling ... original radius = 99.9999 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 4727 nlabel points Performing mapping from target back to the source label 136762 Number of reverse mapping hits = 2783 Checking for and removing duplicates Writing label file ./rh.V1_exvivo.label 7510 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.V2_exvivo.label --trgsubject sub057 --trglabel ./rh.V2_exvivo.label --hemi rh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.V2_exvivo.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./rh.V2_exvivo.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 8016 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Rescaling ... original radius = 99.9999 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 8016 nlabel points Performing mapping from target back to the source label 136762 Number of reverse mapping hits = 4529 Checking for and removing duplicates Writing label file ./rh.V2_exvivo.label 12545 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.MT_exvivo.label --trgsubject sub057 --trglabel ./rh.MT_exvivo.label --hemi rh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.MT_exvivo.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./rh.MT_exvivo.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 1932 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Rescaling ... original radius = 99.9999 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 1932 nlabel points Performing mapping from target back to the source label 136762 Number of reverse mapping hits = 625 Checking for and removing duplicates Writing label file ./rh.MT_exvivo.label 2557 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.entorhinal_exvivo.label --trgsubject sub057 --trglabel ./rh.entorhinal_exvivo.label --hemi rh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.entorhinal_exvivo.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./rh.entorhinal_exvivo.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 1038 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Rescaling ... original radius = 99.9999 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 1038 nlabel points Performing mapping from target back to the source label 136762 Number of reverse mapping hits = 165 Checking for and removing duplicates Writing label file ./rh.entorhinal_exvivo.label 1203 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.perirhinal_exvivo.label --trgsubject sub057 --trglabel ./rh.perirhinal_exvivo.label --hemi rh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.perirhinal_exvivo.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./rh.perirhinal_exvivo.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 752 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Rescaling ... original radius = 99.9999 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 752 nlabel points Performing mapping from target back to the source label 136762 Number of reverse mapping hits = 119 Checking for and removing duplicates Writing label file ./rh.perirhinal_exvivo.label 871 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA1_exvivo.thresh.label --trgsubject sub057 --trglabel ./rh.BA1_exvivo.thresh.label --hemi rh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA1_exvivo.thresh.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./rh.BA1_exvivo.thresh.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 876 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Rescaling ... original radius = 99.9999 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 876 nlabel points Performing mapping from target back to the source label 136762 Number of reverse mapping hits = 79 Checking for and removing duplicates Writing label file ./rh.BA1_exvivo.thresh.label 955 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA2_exvivo.thresh.label --trgsubject sub057 --trglabel ./rh.BA2_exvivo.thresh.label --hemi rh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA2_exvivo.thresh.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./rh.BA2_exvivo.thresh.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 2688 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Rescaling ... original radius = 99.9999 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 2688 nlabel points Performing mapping from target back to the source label 136762 Number of reverse mapping hits = 68 Checking for and removing duplicates Writing label file ./rh.BA2_exvivo.thresh.label 2756 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA3a_exvivo.thresh.label --trgsubject sub057 --trglabel ./rh.BA3a_exvivo.thresh.label --hemi rh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA3a_exvivo.thresh.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./rh.BA3a_exvivo.thresh.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 1698 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Rescaling ... original radius = 99.9999 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 1698 nlabel points Performing mapping from target back to the source label 136762 Number of reverse mapping hits = 50 Checking for and removing duplicates Writing label file ./rh.BA3a_exvivo.thresh.label 1748 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA3b_exvivo.thresh.label --trgsubject sub057 --trglabel ./rh.BA3b_exvivo.thresh.label --hemi rh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA3b_exvivo.thresh.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./rh.BA3b_exvivo.thresh.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 2183 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Rescaling ... original radius = 99.9999 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 2183 nlabel points Performing mapping from target back to the source label 136762 Number of reverse mapping hits = 110 Checking for and removing duplicates Writing label file ./rh.BA3b_exvivo.thresh.label 2293 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA4a_exvivo.thresh.label --trgsubject sub057 --trglabel ./rh.BA4a_exvivo.thresh.label --hemi rh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA4a_exvivo.thresh.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./rh.BA4a_exvivo.thresh.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 1388 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Rescaling ... original radius = 99.9999 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 1388 nlabel points Performing mapping from target back to the source label 136762 Number of reverse mapping hits = 72 Checking for and removing duplicates Writing label file ./rh.BA4a_exvivo.thresh.label 1460 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA4p_exvivo.thresh.label --trgsubject sub057 --trglabel ./rh.BA4p_exvivo.thresh.label --hemi rh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA4p_exvivo.thresh.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./rh.BA4p_exvivo.thresh.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 1489 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Rescaling ... original radius = 99.9999 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 1489 nlabel points Performing mapping from target back to the source label 136762 Number of reverse mapping hits = 48 Checking for and removing duplicates Writing label file ./rh.BA4p_exvivo.thresh.label 1537 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA6_exvivo.thresh.label --trgsubject sub057 --trglabel ./rh.BA6_exvivo.thresh.label --hemi rh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA6_exvivo.thresh.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./rh.BA6_exvivo.thresh.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 6959 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Rescaling ... original radius = 99.9999 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 6959 nlabel points Performing mapping from target back to the source label 136762 Number of reverse mapping hits = 719 Checking for and removing duplicates Writing label file ./rh.BA6_exvivo.thresh.label 7678 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA44_exvivo.thresh.label --trgsubject sub057 --trglabel ./rh.BA44_exvivo.thresh.label --hemi rh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA44_exvivo.thresh.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./rh.BA44_exvivo.thresh.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 1012 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Rescaling ... original radius = 99.9999 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 1012 nlabel points Performing mapping from target back to the source label 136762 Number of reverse mapping hits = 88 Checking for and removing duplicates Writing label file ./rh.BA44_exvivo.thresh.label 1100 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA45_exvivo.thresh.label --trgsubject sub057 --trglabel ./rh.BA45_exvivo.thresh.label --hemi rh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.BA45_exvivo.thresh.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./rh.BA45_exvivo.thresh.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 1178 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Rescaling ... original radius = 99.9999 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 1178 nlabel points Performing mapping from target back to the source label 136762 Number of reverse mapping hits = 115 Checking for and removing duplicates Writing label file ./rh.BA45_exvivo.thresh.label 1293 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.V1_exvivo.thresh.label --trgsubject sub057 --trglabel ./rh.V1_exvivo.thresh.label --hemi rh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.V1_exvivo.thresh.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./rh.V1_exvivo.thresh.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 3232 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Rescaling ... original radius = 99.9999 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 3232 nlabel points Performing mapping from target back to the source label 136762 Number of reverse mapping hits = 1907 Checking for and removing duplicates Writing label file ./rh.V1_exvivo.thresh.label 5139 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.V2_exvivo.thresh.label --trgsubject sub057 --trglabel ./rh.V2_exvivo.thresh.label --hemi rh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.V2_exvivo.thresh.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./rh.V2_exvivo.thresh.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 3437 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Rescaling ... original radius = 99.9999 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 3437 nlabel points Performing mapping from target back to the source label 136762 Number of reverse mapping hits = 2019 Checking for and removing duplicates Writing label file ./rh.V2_exvivo.thresh.label 5456 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.MT_exvivo.thresh.label --trgsubject sub057 --trglabel ./rh.MT_exvivo.thresh.label --hemi rh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.MT_exvivo.thresh.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./rh.MT_exvivo.thresh.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 268 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Rescaling ... original radius = 99.9999 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 268 nlabel points Performing mapping from target back to the source label 136762 Number of reverse mapping hits = 104 Checking for and removing duplicates Writing label file ./rh.MT_exvivo.thresh.label 372 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.entorhinal_exvivo.thresh.label --trgsubject sub057 --trglabel ./rh.entorhinal_exvivo.thresh.label --hemi rh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.entorhinal_exvivo.thresh.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./rh.entorhinal_exvivo.thresh.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 694 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Rescaling ... original radius = 99.9999 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 694 nlabel points Performing mapping from target back to the source label 136762 Number of reverse mapping hits = 117 Checking for and removing duplicates Writing label file ./rh.entorhinal_exvivo.thresh.label 811 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.perirhinal_exvivo.thresh.label --trgsubject sub057 --trglabel ./rh.perirhinal_exvivo.thresh.label --hemi rh --regmethod surface srclabel = /home/shenkang/Desktop/T1/RESULTS/fsaverage/label/rh.perirhinal_exvivo.thresh.label srcsubject = fsaverage trgsubject = sub057 trglabel = ./rh.perirhinal_exvivo.thresh.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Loading source label. Found 291 points in source label. Starting surface-based mapping Reading source registration /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white Reading target registration /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Rescaling ... original radius = 99.9999 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 291 nlabel points Performing mapping from target back to the source label 136762 Number of reverse mapping hits = 50 Checking for and removing duplicates Writing label file ./rh.perirhinal_exvivo.thresh.label 341 mri_label2label: Done mris_label2annot --s sub057 --hemi rh --ctab /opt/freesurfer/average/colortable_BA.txt --l rh.BA1_exvivo.label --l rh.BA2_exvivo.label --l rh.BA3a_exvivo.label --l rh.BA3b_exvivo.label --l rh.BA4a_exvivo.label --l rh.BA4p_exvivo.label --l rh.BA6_exvivo.label --l rh.BA44_exvivo.label --l rh.BA45_exvivo.label --l rh.V1_exvivo.label --l rh.V2_exvivo.label --l rh.MT_exvivo.label --l rh.entorhinal_exvivo.label --l rh.perirhinal_exvivo.label --a BA_exvivo --maxstatwinner --noverbose Reading ctab /opt/freesurfer/average/colortable_BA.txt Number of ctab entries 15 $Id: mris_label2annot.c,v 1.20 2016/01/07 23:28:11 greve Exp $ cwd /home/shenkang/Desktop/T1/RESULTS/sub057/label cmdline mris_label2annot --s sub057 --hemi rh --ctab /opt/freesurfer/average/colortable_BA.txt --l rh.BA1_exvivo.label --l rh.BA2_exvivo.label --l rh.BA3a_exvivo.label --l rh.BA3b_exvivo.label --l rh.BA4a_exvivo.label --l rh.BA4p_exvivo.label --l rh.BA6_exvivo.label --l rh.BA44_exvivo.label --l rh.BA45_exvivo.label --l rh.V1_exvivo.label --l rh.V2_exvivo.label --l rh.MT_exvivo.label --l rh.entorhinal_exvivo.label --l rh.perirhinal_exvivo.label --a BA_exvivo --maxstatwinner --noverbose sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang subject sub057 hemi rh SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS ColorTable /opt/freesurfer/average/colortable_BA.txt AnnotName BA_exvivo nlables 14 LabelThresh 0 0.000000 Loading /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.orig 1 1530880 BA1_exvivo 2 16749699 BA2_exvivo 3 16711680 BA3a_exvivo 4 3368703 BA3b_exvivo 5 1376196 BA4a_exvivo 6 13382655 BA4p_exvivo 7 10036737 BA6_exvivo 8 2490521 BA44_exvivo 9 39283 BA45_exvivo 10 3993 V1_exvivo 11 8508928 V2_exvivo 12 10027163 MT_exvivo 13 16422433 perirhinal_exvivo 14 16392598 entorhinal_exvivo Mapping unhit to unknown Found 92101 unhit vertices Writing annot to /home/shenkang/Desktop/T1/RESULTS/sub057/label/rh.BA_exvivo.annot mris_label2annot --s sub057 --hemi rh --ctab /opt/freesurfer/average/colortable_BA.txt --l rh.BA1_exvivo.thresh.label --l rh.BA2_exvivo.thresh.label --l rh.BA3a_exvivo.thresh.label --l rh.BA3b_exvivo.thresh.label --l rh.BA4a_exvivo.thresh.label --l rh.BA4p_exvivo.thresh.label --l rh.BA6_exvivo.thresh.label --l rh.BA44_exvivo.thresh.label --l rh.BA45_exvivo.thresh.label --l rh.V1_exvivo.thresh.label --l rh.V2_exvivo.thresh.label --l rh.MT_exvivo.thresh.label --l rh.entorhinal_exvivo.thresh.label --l rh.perirhinal_exvivo.thresh.label --a BA_exvivo.thresh --maxstatwinner --noverbose Reading ctab /opt/freesurfer/average/colortable_BA.txt Number of ctab entries 15 $Id: mris_label2annot.c,v 1.20 2016/01/07 23:28:11 greve Exp $ cwd /home/shenkang/Desktop/T1/RESULTS/sub057/label cmdline mris_label2annot --s sub057 --hemi rh --ctab /opt/freesurfer/average/colortable_BA.txt --l rh.BA1_exvivo.thresh.label --l rh.BA2_exvivo.thresh.label --l rh.BA3a_exvivo.thresh.label --l rh.BA3b_exvivo.thresh.label --l rh.BA4a_exvivo.thresh.label --l rh.BA4p_exvivo.thresh.label --l rh.BA6_exvivo.thresh.label --l rh.BA44_exvivo.thresh.label --l rh.BA45_exvivo.thresh.label --l rh.V1_exvivo.thresh.label --l rh.V2_exvivo.thresh.label --l rh.MT_exvivo.thresh.label --l rh.entorhinal_exvivo.thresh.label --l rh.perirhinal_exvivo.thresh.label --a BA_exvivo.thresh --maxstatwinner --noverbose sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang subject sub057 hemi rh SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS ColorTable /opt/freesurfer/average/colortable_BA.txt AnnotName BA_exvivo.thresh nlables 14 LabelThresh 0 0.000000 Loading /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.orig 1 1530880 BA1_exvivo 2 16749699 BA2_exvivo 3 16711680 BA3a_exvivo 4 3368703 BA3b_exvivo 5 1376196 BA4a_exvivo 6 13382655 BA4p_exvivo 7 10036737 BA6_exvivo 8 2490521 BA44_exvivo 9 39283 BA45_exvivo 10 3993 V1_exvivo 11 8508928 V2_exvivo 12 10027163 MT_exvivo 13 16422433 perirhinal_exvivo 14 16392598 entorhinal_exvivo Mapping unhit to unknown Found 111130 unhit vertices Writing annot to /home/shenkang/Desktop/T1/RESULTS/sub057/label/rh.BA_exvivo.thresh.annot mris_anatomical_stats -th3 -mgz -f ../stats/rh.BA_exvivo.stats -b -a ./rh.BA_exvivo.annot -c ./BA_exvivo.ctab sub057 rh white computing statistics for each annotation in ./rh.BA_exvivo.annot. reading volume /home/shenkang/Desktop/T1/RESULTS/sub057/mri/wm.mgz... reading input surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white... reading input pial surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.pial... reading input white surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white... INFO: using TH3 volume calc INFO: assuming MGZ format for volumes. Using TH3 vertex volume calc Total face volume 318049 Total vertex volume 313899 (mask=0) reading colortable from annotation file... colortable with 15 entries read (originally /opt/freesurfer/average/colortable_BA.txt) Saving annotation colortable ./BA_exvivo.ctab table columns are: number of vertices total surface area (mm^2) total gray matter volume (mm^3) average cortical thickness +- standard deviation (mm) integrated rectified mean curvature integrated rectified Gaussian curvature folding index intrinsic curvature index structure name atlas_icv (eTIV) = 1451720 mm^3 (det: 1.341929 ) lhCtxGM: 314458.849 314212.000 diff= 246.8 pctdiff= 0.078 rhCtxGM: 311706.989 311551.000 diff= 156.0 pctdiff= 0.050 lhCtxWM: 184609.376 185288.000 diff= -678.6 pctdiff=-0.368 rhCtxWM: 184172.173 183864.000 diff= 308.2 pctdiff= 0.167 SubCortGMVol 60685.000 SupraTentVol 1067623.387 (1065380.000) diff=2243.387 pctdiff=0.210 SupraTentVolNotVent 1057871.387 (1055628.000) diff=2243.387 pctdiff=0.212 BrainSegVol 1200395.000 (1198539.000) diff=1856.000 pctdiff=0.155 BrainSegVolNotVent 1188121.000 (1187977.387) diff=143.613 pctdiff=0.012 BrainSegVolNotVent 1188121.000 CerebellumVol 132317.000 VentChorVol 9752.000 3rd4th5thCSF 2522.000 CSFVol 666.000, OptChiasmVol 176.000 MaskVol 1528690.000 951 578 2106 2.623 0.587 0.148 0.038 21 1.4 BA1_exvivo 3071 2113 5521 2.355 0.621 0.117 0.024 39 2.8 BA2_exvivo 1089 734 1160 2.091 0.498 0.122 0.023 9 1.1 BA3a_exvivo 1984 1357 2985 1.969 0.599 0.096 0.015 19 1.2 BA3b_exvivo 1673 1116 3428 2.580 0.521 0.105 0.016 17 1.1 BA4a_exvivo 1282 848 2206 2.494 0.407 0.096 0.017 9 0.8 BA4p_exvivo 8790 6041 22487 3.008 0.745 0.121 0.027 128 10.4 BA6_exvivo 3070 2141 7369 3.035 0.499 0.106 0.023 35 2.6 BA44_exvivo 4060 2853 11054 3.059 0.628 0.133 0.029 64 4.7 BA45_exvivo 5149 3605 8074 2.113 0.592 0.143 0.038 82 8.0 V1_exvivo 10170 6873 19053 2.453 0.649 0.141 0.035 167 14.2 V2_exvivo 2314 1594 5662 2.989 0.574 0.125 0.025 30 2.4 MT_exvivo 667 437 2701 3.489 1.004 0.145 0.053 13 1.3 perirhinal_exvivo 391 270 1045 2.802 0.775 0.126 0.043 4 0.6 entorhinal_exvivo mris_anatomical_stats -th3 -mgz -f ../stats/rh.BA_exvivo.thresh.stats -b -a ./rh.BA_exvivo.thresh.annot -c ./BA_exvivo.thresh.ctab sub057 rh white computing statistics for each annotation in ./rh.BA_exvivo.thresh.annot. reading volume /home/shenkang/Desktop/T1/RESULTS/sub057/mri/wm.mgz... reading input surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white... reading input pial surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.pial... reading input white surface /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white... INFO: using TH3 volume calc INFO: assuming MGZ format for volumes. Using TH3 vertex volume calc Total face volume 318049 Total vertex volume 313899 (mask=0) reading colortable from annotation file... colortable with 15 entries read (originally /opt/freesurfer/average/colortable_BA.txt) Saving annotation colortable ./BA_exvivo.thresh.ctab table columns are: number of vertices total surface area (mm^2) total gray matter volume (mm^3) average cortical thickness +- standard deviation (mm) integrated rectified mean curvature integrated rectified Gaussian curvature folding index intrinsic curvature index structure name atlas_icv (eTIV) = 1451720 mm^3 (det: 1.341929 ) lhCtxGM: 314458.849 314212.000 diff= 246.8 pctdiff= 0.078 rhCtxGM: 311706.989 311551.000 diff= 156.0 pctdiff= 0.050 lhCtxWM: 184609.376 185288.000 diff= -678.6 pctdiff=-0.368 rhCtxWM: 184172.173 183864.000 diff= 308.2 pctdiff= 0.167 SubCortGMVol 60685.000 SupraTentVol 1067623.387 (1065380.000) diff=2243.387 pctdiff=0.210 SupraTentVolNotVent 1057871.387 (1055628.000) diff=2243.387 pctdiff=0.212 BrainSegVol 1200395.000 (1198539.000) diff=1856.000 pctdiff=0.155 BrainSegVolNotVent 1188121.000 (1187977.387) diff=143.613 pctdiff=0.012 BrainSegVolNotVent 1188121.000 CerebellumVol 132317.000 VentChorVol 9752.000 3rd4th5thCSF 2522.000 CSFVol 666.000, OptChiasmVol 176.000 MaskVol 1528690.000 667 401 1480 2.617 0.580 0.130 0.027 12 0.7 BA1_exvivo 1588 1087 3022 2.371 0.632 0.101 0.020 15 1.3 BA2_exvivo 977 653 963 2.099 0.466 0.125 0.024 8 1.0 BA3a_exvivo 1550 1089 2039 1.807 0.513 0.086 0.011 11 0.7 BA3b_exvivo 977 660 2258 2.720 0.520 0.133 0.024 14 0.9 BA4a_exvivo 1045 707 1611 2.368 0.358 0.081 0.013 4 0.5 BA4p_exvivo 5855 3989 14769 2.987 0.737 0.120 0.028 90 7.5 BA6_exvivo 804 572 2267 3.041 0.473 0.112 0.028 12 0.9 BA44_exvivo 953 718 3546 3.389 0.657 0.146 0.035 20 1.3 BA45_exvivo 4931 3467 7647 2.133 0.584 0.139 0.036 73 7.3 V1_exvivo 5270 3541 9283 2.348 0.647 0.151 0.040 92 8.5 V2_exvivo 347 257 992 2.849 0.659 0.131 0.031 7 0.4 MT_exvivo 397 262 1719 3.623 0.930 0.134 0.054 8 0.8 perirhinal_exvivo 271 179 583 2.571 0.848 0.138 0.056 4 0.5 entorhinal_exvivo #-------------------------------------------- #@# Qdec Cache preproc lh thickness fsaverage Thu 17 Nov 2022 09:48:50 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/surf mris_preproc --s sub057 --hemi lh --meas thickness --target fsaverage --out lh.thickness.fsaverage.mgh nsubjects = 1 tmpdir is ./tmp.mris_preproc.474296 /home/shenkang/Desktop/T1/RESULTS/sub057/surf Log file is lh.thickness.fsaverage.mris_preproc.log Thu 17 Nov 2022 09:48:50 AM CST setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf /opt/freesurfer/bin/mris_preproc --s sub057 --hemi lh --meas thickness --target fsaverage --out lh.thickness.fsaverage.mgh Linux shenkang-B560M-AORUS-ELITE 5.15.0-46-generic #49~20.04.1-Ubuntu SMP Thu Aug 4 19:15:44 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is ./tmp.mris_preproc.474296 Src lh sphere.reg Trg lh sphere.reg --------------------------------------------------- #@# 1/1 sub057 Thu 17 Nov 2022 09:48:50 AM CST -------------- ----------------------- mri_surf2surf --srcsubject sub057 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.474296/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --srcsubject sub057 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.474296/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = sub057 srcval = /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.thickness srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.474296/sub057.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Loading source data Reading curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.thickness Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (137924) Reverse Loop had 22553 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 146278, nTrgMulti = 17564, MnTrgMultiHits = 2.28405 nSrc121 = 99654, nSrcLost = 0, nSrcMulti = 38270, MnSrcMultiHits = 2.26655 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.474296/sub057.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.474296/sub057.1.mgh --o lh.thickness.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to lh.thickness.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.474296 Thu 17 Nov 2022 09:48:56 AM CST mris_preproc done #-------------------------------------------- #@# Qdec Cache preproc lh area fsaverage Thu 17 Nov 2022 09:48:56 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/surf mris_preproc --s sub057 --hemi lh --meas area --target fsaverage --out lh.area.fsaverage.mgh nsubjects = 1 INFO: turning on jacobican correction tmpdir is ./tmp.mris_preproc.474423 /home/shenkang/Desktop/T1/RESULTS/sub057/surf Log file is lh.area.fsaverage.mris_preproc.log Thu 17 Nov 2022 09:48:56 AM CST setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf /opt/freesurfer/bin/mris_preproc --s sub057 --hemi lh --meas area --target fsaverage --out lh.area.fsaverage.mgh Linux shenkang-B560M-AORUS-ELITE 5.15.0-46-generic #49~20.04.1-Ubuntu SMP Thu Aug 4 19:15:44 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is ./tmp.mris_preproc.474423 Src lh sphere.reg Trg lh sphere.reg --------------------------------------------------- #@# 1/1 sub057 Thu 17 Nov 2022 09:48:56 AM CST -------------- ----------------------- mri_surf2surf --srcsubject sub057 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.474423/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --srcsubject sub057 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.474423/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = sub057 srcval = /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.area srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.474423/sub057.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Loading source data Reading curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.area Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (137924) Reverse Loop had 22553 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 146278, nTrgMulti = 17564, MnTrgMultiHits = 2.28405 nSrc121 = 99654, nSrcLost = 0, nSrcMulti = 38270, MnSrcMultiHits = 2.26655 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.474423/sub057.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.474423/sub057.1.mgh --o lh.area.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to lh.area.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.474423 Thu 17 Nov 2022 09:49:04 AM CST mris_preproc done #-------------------------------------------- #@# Qdec Cache preproc lh area.pial fsaverage Thu 17 Nov 2022 09:49:04 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/surf mris_preproc --s sub057 --hemi lh --meas area.pial --target fsaverage --out lh.area.pial.fsaverage.mgh nsubjects = 1 INFO: turning on jacobican correction tmpdir is ./tmp.mris_preproc.474549 /home/shenkang/Desktop/T1/RESULTS/sub057/surf Log file is lh.area.pial.fsaverage.mris_preproc.log Thu 17 Nov 2022 09:49:04 AM CST setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf /opt/freesurfer/bin/mris_preproc --s sub057 --hemi lh --meas area.pial --target fsaverage --out lh.area.pial.fsaverage.mgh Linux shenkang-B560M-AORUS-ELITE 5.15.0-46-generic #49~20.04.1-Ubuntu SMP Thu Aug 4 19:15:44 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is ./tmp.mris_preproc.474549 Src lh sphere.reg Trg lh sphere.reg --------------------------------------------------- #@# 1/1 sub057 Thu 17 Nov 2022 09:49:04 AM CST -------------- ----------------------- mri_surf2surf --srcsubject sub057 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.474549/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.area.pial --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --srcsubject sub057 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.474549/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.area.pial --jac --sfmt curv --noreshape --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = sub057 srcval = /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.area.pial srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.474549/sub057.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Loading source data Reading curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.area.pial Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (137924) Reverse Loop had 22553 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 146278, nTrgMulti = 17564, MnTrgMultiHits = 2.28405 nSrc121 = 99654, nSrcLost = 0, nSrcMulti = 38270, MnSrcMultiHits = 2.26655 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.474549/sub057.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.474549/sub057.1.mgh --o lh.area.pial.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to lh.area.pial.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.474549 Thu 17 Nov 2022 09:49:12 AM CST mris_preproc done #-------------------------------------------- #@# Qdec Cache preproc lh volume fsaverage Thu 17 Nov 2022 09:49:12 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/surf mris_preproc --s sub057 --hemi lh --meas volume --target fsaverage --out lh.volume.fsaverage.mgh nsubjects = 1 INFO: turning on jacobican correction tmpdir is ./tmp.mris_preproc.474709 /home/shenkang/Desktop/T1/RESULTS/sub057/surf Log file is lh.volume.fsaverage.mris_preproc.log Thu 17 Nov 2022 09:49:12 AM CST setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf /opt/freesurfer/bin/mris_preproc --s sub057 --hemi lh --meas volume --target fsaverage --out lh.volume.fsaverage.mgh Linux shenkang-B560M-AORUS-ELITE 5.15.0-46-generic #49~20.04.1-Ubuntu SMP Thu Aug 4 19:15:44 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is ./tmp.mris_preproc.474709 Src lh sphere.reg Trg lh sphere.reg --------------------------------------------------- #@# 1/1 sub057 Thu 17 Nov 2022 09:49:12 AM CST -------------- ----------------------- mri_surf2surf --srcsubject sub057 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.474709/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --srcsubject sub057 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.474709/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = sub057 srcval = /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.volume srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.474709/sub057.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Loading source data Reading curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.volume Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (137924) Reverse Loop had 22553 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 146278, nTrgMulti = 17564, MnTrgMultiHits = 2.28405 nSrc121 = 99654, nSrcLost = 0, nSrcMulti = 38270, MnSrcMultiHits = 2.26655 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.474709/sub057.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.474709/sub057.1.mgh --o lh.volume.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to lh.volume.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.474709 Thu 17 Nov 2022 09:49:19 AM CST mris_preproc done #-------------------------------------------- #@# Qdec Cache preproc lh curv fsaverage Thu 17 Nov 2022 09:49:19 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/surf mris_preproc --s sub057 --hemi lh --meas curv --target fsaverage --out lh.curv.fsaverage.mgh nsubjects = 1 tmpdir is ./tmp.mris_preproc.474835 /home/shenkang/Desktop/T1/RESULTS/sub057/surf Log file is lh.curv.fsaverage.mris_preproc.log Thu 17 Nov 2022 09:49:19 AM CST setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf /opt/freesurfer/bin/mris_preproc --s sub057 --hemi lh --meas curv --target fsaverage --out lh.curv.fsaverage.mgh Linux shenkang-B560M-AORUS-ELITE 5.15.0-46-generic #49~20.04.1-Ubuntu SMP Thu Aug 4 19:15:44 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is ./tmp.mris_preproc.474835 Src lh sphere.reg Trg lh sphere.reg --------------------------------------------------- #@# 1/1 sub057 Thu 17 Nov 2022 09:49:19 AM CST -------------- ----------------------- mri_surf2surf --srcsubject sub057 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.474835/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --srcsubject sub057 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.474835/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.curv --sfmt curv --noreshape --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = sub057 srcval = /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.curv srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.474835/sub057.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Loading source data Reading curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.curv Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (137924) Reverse Loop had 22553 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 146278, nTrgMulti = 17564, MnTrgMultiHits = 2.28405 nSrc121 = 99654, nSrcLost = 0, nSrcMulti = 38270, MnSrcMultiHits = 2.26655 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.474835/sub057.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.474835/sub057.1.mgh --o lh.curv.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to lh.curv.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.474835 Thu 17 Nov 2022 09:49:26 AM CST mris_preproc done #-------------------------------------------- #@# Qdec Cache preproc lh sulc fsaverage Thu 17 Nov 2022 09:49:26 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/surf mris_preproc --s sub057 --hemi lh --meas sulc --target fsaverage --out lh.sulc.fsaverage.mgh nsubjects = 1 tmpdir is ./tmp.mris_preproc.474962 /home/shenkang/Desktop/T1/RESULTS/sub057/surf Log file is lh.sulc.fsaverage.mris_preproc.log Thu 17 Nov 2022 09:49:26 AM CST setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf /opt/freesurfer/bin/mris_preproc --s sub057 --hemi lh --meas sulc --target fsaverage --out lh.sulc.fsaverage.mgh Linux shenkang-B560M-AORUS-ELITE 5.15.0-46-generic #49~20.04.1-Ubuntu SMP Thu Aug 4 19:15:44 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is ./tmp.mris_preproc.474962 Src lh sphere.reg Trg lh sphere.reg --------------------------------------------------- #@# 1/1 sub057 Thu 17 Nov 2022 09:49:26 AM CST -------------- ----------------------- mri_surf2surf --srcsubject sub057 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.474962/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --srcsubject sub057 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.474962/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = sub057 srcval = /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sulc srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.474962/sub057.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Loading source data Reading curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sulc Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (137924) Reverse Loop had 22553 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 146278, nTrgMulti = 17564, MnTrgMultiHits = 2.28405 nSrc121 = 99654, nSrcLost = 0, nSrcMulti = 38270, MnSrcMultiHits = 2.26655 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.474962/sub057.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.474962/sub057.1.mgh --o lh.sulc.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to lh.sulc.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.474962 Thu 17 Nov 2022 09:49:32 AM CST mris_preproc done #-------------------------------------------- #@# Qdec Cache preproc lh white.K fsaverage Thu 17 Nov 2022 09:49:32 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/surf mris_preproc --s sub057 --hemi lh --meas white.K --target fsaverage --out lh.white.K.fsaverage.mgh nsubjects = 1 tmpdir is ./tmp.mris_preproc.475087 /home/shenkang/Desktop/T1/RESULTS/sub057/surf Log file is lh.white.K.fsaverage.mris_preproc.log Thu 17 Nov 2022 09:49:32 AM CST setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf /opt/freesurfer/bin/mris_preproc --s sub057 --hemi lh --meas white.K --target fsaverage --out lh.white.K.fsaverage.mgh Linux shenkang-B560M-AORUS-ELITE 5.15.0-46-generic #49~20.04.1-Ubuntu SMP Thu Aug 4 19:15:44 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is ./tmp.mris_preproc.475087 Src lh sphere.reg Trg lh sphere.reg --------------------------------------------------- #@# 1/1 sub057 Thu 17 Nov 2022 09:49:32 AM CST -------------- ----------------------- mri_surf2surf --srcsubject sub057 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.475087/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white.K --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --srcsubject sub057 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.475087/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white.K --sfmt curv --noreshape --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = sub057 srcval = /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white.K srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.475087/sub057.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Loading source data Reading curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white.K Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (137924) Reverse Loop had 22553 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 146278, nTrgMulti = 17564, MnTrgMultiHits = 2.28405 nSrc121 = 99654, nSrcLost = 0, nSrcMulti = 38270, MnSrcMultiHits = 2.26655 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.475087/sub057.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.475087/sub057.1.mgh --o lh.white.K.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to lh.white.K.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.475087 Thu 17 Nov 2022 09:49:39 AM CST mris_preproc done #-------------------------------------------- #@# Qdec Cache preproc lh white.H fsaverage Thu 17 Nov 2022 09:49:39 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/surf mris_preproc --s sub057 --hemi lh --meas white.H --target fsaverage --out lh.white.H.fsaverage.mgh nsubjects = 1 tmpdir is ./tmp.mris_preproc.475214 /home/shenkang/Desktop/T1/RESULTS/sub057/surf Log file is lh.white.H.fsaverage.mris_preproc.log Thu 17 Nov 2022 09:49:39 AM CST setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf /opt/freesurfer/bin/mris_preproc --s sub057 --hemi lh --meas white.H --target fsaverage --out lh.white.H.fsaverage.mgh Linux shenkang-B560M-AORUS-ELITE 5.15.0-46-generic #49~20.04.1-Ubuntu SMP Thu Aug 4 19:15:44 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is ./tmp.mris_preproc.475214 Src lh sphere.reg Trg lh sphere.reg --------------------------------------------------- #@# 1/1 sub057 Thu 17 Nov 2022 09:49:39 AM CST -------------- ----------------------- mri_surf2surf --srcsubject sub057 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.475214/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --srcsubject sub057 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.475214/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white.H --sfmt curv --noreshape --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = sub057 srcval = /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white.H srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.475214/sub057.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Loading source data Reading curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.white.H Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (137924) Reverse Loop had 22553 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 146278, nTrgMulti = 17564, MnTrgMultiHits = 2.28405 nSrc121 = 99654, nSrcLost = 0, nSrcMulti = 38270, MnSrcMultiHits = 2.26655 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.475214/sub057.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.475214/sub057.1.mgh --o lh.white.H.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to lh.white.H.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.475214 Thu 17 Nov 2022 09:49:45 AM CST mris_preproc done #-------------------------------------------- #@# Qdec Cache preproc lh jacobian_white fsaverage Thu 17 Nov 2022 09:49:45 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/surf mris_preproc --s sub057 --hemi lh --meas jacobian_white --target fsaverage --out lh.jacobian_white.fsaverage.mgh nsubjects = 1 tmpdir is ./tmp.mris_preproc.475356 /home/shenkang/Desktop/T1/RESULTS/sub057/surf Log file is lh.jacobian_white.fsaverage.mris_preproc.log Thu 17 Nov 2022 09:49:45 AM CST setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf /opt/freesurfer/bin/mris_preproc --s sub057 --hemi lh --meas jacobian_white --target fsaverage --out lh.jacobian_white.fsaverage.mgh Linux shenkang-B560M-AORUS-ELITE 5.15.0-46-generic #49~20.04.1-Ubuntu SMP Thu Aug 4 19:15:44 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is ./tmp.mris_preproc.475356 Src lh sphere.reg Trg lh sphere.reg --------------------------------------------------- #@# 1/1 sub057 Thu 17 Nov 2022 09:49:45 AM CST -------------- ----------------------- mri_surf2surf --srcsubject sub057 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.475356/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.jacobian_white --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --srcsubject sub057 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.475356/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.jacobian_white --sfmt curv --noreshape --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = sub057 srcval = /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.jacobian_white srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.475356/sub057.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Loading source data Reading curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.jacobian_white Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (137924) Reverse Loop had 22553 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 146278, nTrgMulti = 17564, MnTrgMultiHits = 2.28405 nSrc121 = 99654, nSrcLost = 0, nSrcMulti = 38270, MnSrcMultiHits = 2.26655 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.475356/sub057.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.475356/sub057.1.mgh --o lh.jacobian_white.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to lh.jacobian_white.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.475356 Thu 17 Nov 2022 09:49:51 AM CST mris_preproc done #-------------------------------------------- #@# Qdec Cache preproc lh w-g.pct.mgh fsaverage Thu 17 Nov 2022 09:49:51 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/surf mris_preproc --s sub057 --hemi lh --meas w-g.pct.mgh --target fsaverage --out lh.w-g.pct.mgh.fsaverage.mgh nsubjects = 1 tmpdir is ./tmp.mris_preproc.475482 /home/shenkang/Desktop/T1/RESULTS/sub057/surf Log file is lh.w-g.pct.mgh.fsaverage.mris_preproc.log Thu 17 Nov 2022 09:49:51 AM CST setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf /opt/freesurfer/bin/mris_preproc --s sub057 --hemi lh --meas w-g.pct.mgh --target fsaverage --out lh.w-g.pct.mgh.fsaverage.mgh Linux shenkang-B560M-AORUS-ELITE 5.15.0-46-generic #49~20.04.1-Ubuntu SMP Thu Aug 4 19:15:44 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is ./tmp.mris_preproc.475482 Src lh sphere.reg Trg lh sphere.reg --------------------------------------------------- #@# 1/1 sub057 Thu 17 Nov 2022 09:49:51 AM CST -------------- ----------------------- mri_surf2surf --srcsubject sub057 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.475482/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.w-g.pct.mgh --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --srcsubject sub057 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.475482/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.w-g.pct.mgh --sfmt curv --noreshape --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = sub057 srcval = /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.w-g.pct.mgh srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.475482/sub057.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Loading source data Reading curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.w-g.pct.mgh Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (137924) Reverse Loop had 22553 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 146278, nTrgMulti = 17564, MnTrgMultiHits = 2.28405 nSrc121 = 99654, nSrcLost = 0, nSrcMulti = 38270, MnSrcMultiHits = 2.26655 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.475482/sub057.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.475482/sub057.1.mgh --o lh.w-g.pct.mgh.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to lh.w-g.pct.mgh.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.475482 Thu 17 Nov 2022 09:49:59 AM CST mris_preproc done #-------------------------------------------- #@# Qdec Cache preproc rh thickness fsaverage Thu 17 Nov 2022 09:49:59 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/surf mris_preproc --s sub057 --hemi rh --meas thickness --target fsaverage --out rh.thickness.fsaverage.mgh nsubjects = 1 tmpdir is ./tmp.mris_preproc.475608 /home/shenkang/Desktop/T1/RESULTS/sub057/surf Log file is rh.thickness.fsaverage.mris_preproc.log Thu 17 Nov 2022 09:49:59 AM CST setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf /opt/freesurfer/bin/mris_preproc --s sub057 --hemi rh --meas thickness --target fsaverage --out rh.thickness.fsaverage.mgh Linux shenkang-B560M-AORUS-ELITE 5.15.0-46-generic #49~20.04.1-Ubuntu SMP Thu Aug 4 19:15:44 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is ./tmp.mris_preproc.475608 Src rh sphere.reg Trg rh sphere.reg --------------------------------------------------- #@# 1/1 sub057 Thu 17 Nov 2022 09:49:59 AM CST -------------- ----------------------- mri_surf2surf --srcsubject sub057 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.475608/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --srcsubject sub057 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.475608/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = sub057 srcval = /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.thickness srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.475608/sub057.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Loading source data Reading curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.thickness Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (136762) Reverse Loop had 23604 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 145808, nTrgMulti = 18034, MnTrgMultiHits = 2.30886 nSrc121 = 98143, nSrcLost = 0, nSrcMulti = 38619, MnSrcMultiHits = 2.31241 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.475608/sub057.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.475608/sub057.1.mgh --o rh.thickness.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to rh.thickness.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.475608 Thu 17 Nov 2022 09:50:05 AM CST mris_preproc done #-------------------------------------------- #@# Qdec Cache preproc rh area fsaverage Thu 17 Nov 2022 09:50:05 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/surf mris_preproc --s sub057 --hemi rh --meas area --target fsaverage --out rh.area.fsaverage.mgh nsubjects = 1 INFO: turning on jacobican correction tmpdir is ./tmp.mris_preproc.475735 /home/shenkang/Desktop/T1/RESULTS/sub057/surf Log file is rh.area.fsaverage.mris_preproc.log Thu 17 Nov 2022 09:50:05 AM CST setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf /opt/freesurfer/bin/mris_preproc --s sub057 --hemi rh --meas area --target fsaverage --out rh.area.fsaverage.mgh Linux shenkang-B560M-AORUS-ELITE 5.15.0-46-generic #49~20.04.1-Ubuntu SMP Thu Aug 4 19:15:44 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is ./tmp.mris_preproc.475735 Src rh sphere.reg Trg rh sphere.reg --------------------------------------------------- #@# 1/1 sub057 Thu 17 Nov 2022 09:50:05 AM CST -------------- ----------------------- mri_surf2surf --srcsubject sub057 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.475735/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --srcsubject sub057 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.475735/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = sub057 srcval = /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.area srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.475735/sub057.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Loading source data Reading curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.area Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (136762) Reverse Loop had 23604 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 145808, nTrgMulti = 18034, MnTrgMultiHits = 2.30886 nSrc121 = 98143, nSrcLost = 0, nSrcMulti = 38619, MnSrcMultiHits = 2.31241 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.475735/sub057.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.475735/sub057.1.mgh --o rh.area.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to rh.area.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.475735 Thu 17 Nov 2022 09:50:12 AM CST mris_preproc done #-------------------------------------------- #@# Qdec Cache preproc rh area.pial fsaverage Thu 17 Nov 2022 09:50:12 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/surf mris_preproc --s sub057 --hemi rh --meas area.pial --target fsaverage --out rh.area.pial.fsaverage.mgh nsubjects = 1 INFO: turning on jacobican correction tmpdir is ./tmp.mris_preproc.475860 /home/shenkang/Desktop/T1/RESULTS/sub057/surf Log file is rh.area.pial.fsaverage.mris_preproc.log Thu 17 Nov 2022 09:50:12 AM CST setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf /opt/freesurfer/bin/mris_preproc --s sub057 --hemi rh --meas area.pial --target fsaverage --out rh.area.pial.fsaverage.mgh Linux shenkang-B560M-AORUS-ELITE 5.15.0-46-generic #49~20.04.1-Ubuntu SMP Thu Aug 4 19:15:44 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is ./tmp.mris_preproc.475860 Src rh sphere.reg Trg rh sphere.reg --------------------------------------------------- #@# 1/1 sub057 Thu 17 Nov 2022 09:50:12 AM CST -------------- ----------------------- mri_surf2surf --srcsubject sub057 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.475860/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.area.pial --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --srcsubject sub057 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.475860/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.area.pial --jac --sfmt curv --noreshape --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = sub057 srcval = /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.area.pial srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.475860/sub057.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Loading source data Reading curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.area.pial Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (136762) Reverse Loop had 23604 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 145808, nTrgMulti = 18034, MnTrgMultiHits = 2.30886 nSrc121 = 98143, nSrcLost = 0, nSrcMulti = 38619, MnSrcMultiHits = 2.31241 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.475860/sub057.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.475860/sub057.1.mgh --o rh.area.pial.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to rh.area.pial.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.475860 Thu 17 Nov 2022 09:50:21 AM CST mris_preproc done #-------------------------------------------- #@# Qdec Cache preproc rh volume fsaverage Thu 17 Nov 2022 09:50:21 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/surf mris_preproc --s sub057 --hemi rh --meas volume --target fsaverage --out rh.volume.fsaverage.mgh nsubjects = 1 INFO: turning on jacobican correction tmpdir is ./tmp.mris_preproc.476281 /home/shenkang/Desktop/T1/RESULTS/sub057/surf Log file is rh.volume.fsaverage.mris_preproc.log Thu 17 Nov 2022 09:50:21 AM CST setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf /opt/freesurfer/bin/mris_preproc --s sub057 --hemi rh --meas volume --target fsaverage --out rh.volume.fsaverage.mgh Linux shenkang-B560M-AORUS-ELITE 5.15.0-46-generic #49~20.04.1-Ubuntu SMP Thu Aug 4 19:15:44 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is ./tmp.mris_preproc.476281 Src rh sphere.reg Trg rh sphere.reg --------------------------------------------------- #@# 1/1 sub057 Thu 17 Nov 2022 09:50:21 AM CST -------------- ----------------------- mri_surf2surf --srcsubject sub057 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.476281/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --srcsubject sub057 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.476281/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = sub057 srcval = /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.volume srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.476281/sub057.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Loading source data Reading curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.volume Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (136762) Reverse Loop had 23604 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 145808, nTrgMulti = 18034, MnTrgMultiHits = 2.30886 nSrc121 = 98143, nSrcLost = 0, nSrcMulti = 38619, MnSrcMultiHits = 2.31241 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.476281/sub057.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.476281/sub057.1.mgh --o rh.volume.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to rh.volume.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.476281 Thu 17 Nov 2022 09:50:31 AM CST mris_preproc done #-------------------------------------------- #@# Qdec Cache preproc rh curv fsaverage Thu 17 Nov 2022 09:50:31 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/surf mris_preproc --s sub057 --hemi rh --meas curv --target fsaverage --out rh.curv.fsaverage.mgh nsubjects = 1 tmpdir is ./tmp.mris_preproc.476466 /home/shenkang/Desktop/T1/RESULTS/sub057/surf Log file is rh.curv.fsaverage.mris_preproc.log Thu 17 Nov 2022 09:50:31 AM CST setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf /opt/freesurfer/bin/mris_preproc --s sub057 --hemi rh --meas curv --target fsaverage --out rh.curv.fsaverage.mgh Linux shenkang-B560M-AORUS-ELITE 5.15.0-46-generic #49~20.04.1-Ubuntu SMP Thu Aug 4 19:15:44 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is ./tmp.mris_preproc.476466 Src rh sphere.reg Trg rh sphere.reg --------------------------------------------------- #@# 1/1 sub057 Thu 17 Nov 2022 09:50:31 AM CST -------------- ----------------------- mri_surf2surf --srcsubject sub057 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.476466/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --srcsubject sub057 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.476466/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.curv --sfmt curv --noreshape --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = sub057 srcval = /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.curv srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.476466/sub057.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Loading source data Reading curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.curv Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (136762) Reverse Loop had 23604 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 145808, nTrgMulti = 18034, MnTrgMultiHits = 2.30886 nSrc121 = 98143, nSrcLost = 0, nSrcMulti = 38619, MnSrcMultiHits = 2.31241 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.476466/sub057.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.476466/sub057.1.mgh --o rh.curv.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to rh.curv.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.476466 Thu 17 Nov 2022 09:50:37 AM CST mris_preproc done #-------------------------------------------- #@# Qdec Cache preproc rh sulc fsaverage Thu 17 Nov 2022 09:50:37 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/surf mris_preproc --s sub057 --hemi rh --meas sulc --target fsaverage --out rh.sulc.fsaverage.mgh nsubjects = 1 tmpdir is ./tmp.mris_preproc.476748 /home/shenkang/Desktop/T1/RESULTS/sub057/surf Log file is rh.sulc.fsaverage.mris_preproc.log Thu 17 Nov 2022 09:50:37 AM CST setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf /opt/freesurfer/bin/mris_preproc --s sub057 --hemi rh --meas sulc --target fsaverage --out rh.sulc.fsaverage.mgh Linux shenkang-B560M-AORUS-ELITE 5.15.0-46-generic #49~20.04.1-Ubuntu SMP Thu Aug 4 19:15:44 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is ./tmp.mris_preproc.476748 Src rh sphere.reg Trg rh sphere.reg --------------------------------------------------- #@# 1/1 sub057 Thu 17 Nov 2022 09:50:37 AM CST -------------- ----------------------- mri_surf2surf --srcsubject sub057 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.476748/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --srcsubject sub057 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.476748/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = sub057 srcval = /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sulc srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.476748/sub057.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Loading source data Reading curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sulc Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (136762) Reverse Loop had 23604 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 145808, nTrgMulti = 18034, MnTrgMultiHits = 2.30886 nSrc121 = 98143, nSrcLost = 0, nSrcMulti = 38619, MnSrcMultiHits = 2.31241 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.476748/sub057.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.476748/sub057.1.mgh --o rh.sulc.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to rh.sulc.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.476748 Thu 17 Nov 2022 09:50:44 AM CST mris_preproc done #-------------------------------------------- #@# Qdec Cache preproc rh white.K fsaverage Thu 17 Nov 2022 09:50:44 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/surf mris_preproc --s sub057 --hemi rh --meas white.K --target fsaverage --out rh.white.K.fsaverage.mgh nsubjects = 1 tmpdir is ./tmp.mris_preproc.477024 /home/shenkang/Desktop/T1/RESULTS/sub057/surf Log file is rh.white.K.fsaverage.mris_preproc.log Thu 17 Nov 2022 09:50:44 AM CST setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf /opt/freesurfer/bin/mris_preproc --s sub057 --hemi rh --meas white.K --target fsaverage --out rh.white.K.fsaverage.mgh Linux shenkang-B560M-AORUS-ELITE 5.15.0-46-generic #49~20.04.1-Ubuntu SMP Thu Aug 4 19:15:44 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is ./tmp.mris_preproc.477024 Src rh sphere.reg Trg rh sphere.reg --------------------------------------------------- #@# 1/1 sub057 Thu 17 Nov 2022 09:50:44 AM CST -------------- ----------------------- mri_surf2surf --srcsubject sub057 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.477024/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white.K --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --srcsubject sub057 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.477024/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white.K --sfmt curv --noreshape --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = sub057 srcval = /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white.K srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.477024/sub057.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Loading source data Reading curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white.K Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (136762) Reverse Loop had 23604 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 145808, nTrgMulti = 18034, MnTrgMultiHits = 2.30886 nSrc121 = 98143, nSrcLost = 0, nSrcMulti = 38619, MnSrcMultiHits = 2.31241 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.477024/sub057.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.477024/sub057.1.mgh --o rh.white.K.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to rh.white.K.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.477024 Thu 17 Nov 2022 09:50:51 AM CST mris_preproc done #-------------------------------------------- #@# Qdec Cache preproc rh white.H fsaverage Thu 17 Nov 2022 09:50:51 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/surf mris_preproc --s sub057 --hemi rh --meas white.H --target fsaverage --out rh.white.H.fsaverage.mgh nsubjects = 1 tmpdir is ./tmp.mris_preproc.477320 /home/shenkang/Desktop/T1/RESULTS/sub057/surf Log file is rh.white.H.fsaverage.mris_preproc.log Thu 17 Nov 2022 09:50:51 AM CST setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf /opt/freesurfer/bin/mris_preproc --s sub057 --hemi rh --meas white.H --target fsaverage --out rh.white.H.fsaverage.mgh Linux shenkang-B560M-AORUS-ELITE 5.15.0-46-generic #49~20.04.1-Ubuntu SMP Thu Aug 4 19:15:44 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is ./tmp.mris_preproc.477320 Src rh sphere.reg Trg rh sphere.reg --------------------------------------------------- #@# 1/1 sub057 Thu 17 Nov 2022 09:50:51 AM CST -------------- ----------------------- mri_surf2surf --srcsubject sub057 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.477320/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --srcsubject sub057 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.477320/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white.H --sfmt curv --noreshape --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = sub057 srcval = /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white.H srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.477320/sub057.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Loading source data Reading curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.white.H Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (136762) Reverse Loop had 23604 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 145808, nTrgMulti = 18034, MnTrgMultiHits = 2.30886 nSrc121 = 98143, nSrcLost = 0, nSrcMulti = 38619, MnSrcMultiHits = 2.31241 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.477320/sub057.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.477320/sub057.1.mgh --o rh.white.H.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to rh.white.H.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.477320 Thu 17 Nov 2022 09:50:57 AM CST mris_preproc done #-------------------------------------------- #@# Qdec Cache preproc rh jacobian_white fsaverage Thu 17 Nov 2022 09:50:57 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/surf mris_preproc --s sub057 --hemi rh --meas jacobian_white --target fsaverage --out rh.jacobian_white.fsaverage.mgh nsubjects = 1 tmpdir is ./tmp.mris_preproc.477594 /home/shenkang/Desktop/T1/RESULTS/sub057/surf Log file is rh.jacobian_white.fsaverage.mris_preproc.log Thu 17 Nov 2022 09:50:57 AM CST setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf /opt/freesurfer/bin/mris_preproc --s sub057 --hemi rh --meas jacobian_white --target fsaverage --out rh.jacobian_white.fsaverage.mgh Linux shenkang-B560M-AORUS-ELITE 5.15.0-46-generic #49~20.04.1-Ubuntu SMP Thu Aug 4 19:15:44 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is ./tmp.mris_preproc.477594 Src rh sphere.reg Trg rh sphere.reg --------------------------------------------------- #@# 1/1 sub057 Thu 17 Nov 2022 09:50:57 AM CST -------------- ----------------------- mri_surf2surf --srcsubject sub057 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.477594/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.jacobian_white --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --srcsubject sub057 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.477594/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.jacobian_white --sfmt curv --noreshape --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = sub057 srcval = /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.jacobian_white srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.477594/sub057.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Loading source data Reading curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.jacobian_white Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (136762) Reverse Loop had 23604 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 145808, nTrgMulti = 18034, MnTrgMultiHits = 2.30886 nSrc121 = 98143, nSrcLost = 0, nSrcMulti = 38619, MnSrcMultiHits = 2.31241 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.477594/sub057.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.477594/sub057.1.mgh --o rh.jacobian_white.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to rh.jacobian_white.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.477594 Thu 17 Nov 2022 09:51:02 AM CST mris_preproc done #-------------------------------------------- #@# Qdec Cache preproc rh w-g.pct.mgh fsaverage Thu 17 Nov 2022 09:51:02 AM CST /home/shenkang/Desktop/T1/RESULTS/sub057/surf mris_preproc --s sub057 --hemi rh --meas w-g.pct.mgh --target fsaverage --out rh.w-g.pct.mgh.fsaverage.mgh nsubjects = 1 tmpdir is ./tmp.mris_preproc.477763 /home/shenkang/Desktop/T1/RESULTS/sub057/surf Log file is rh.w-g.pct.mgh.fsaverage.mris_preproc.log Thu 17 Nov 2022 09:51:02 AM CST setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf /opt/freesurfer/bin/mris_preproc --s sub057 --hemi rh --meas w-g.pct.mgh --target fsaverage --out rh.w-g.pct.mgh.fsaverage.mgh Linux shenkang-B560M-AORUS-ELITE 5.15.0-46-generic #49~20.04.1-Ubuntu SMP Thu Aug 4 19:15:44 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is ./tmp.mris_preproc.477763 Src rh sphere.reg Trg rh sphere.reg --------------------------------------------------- #@# 1/1 sub057 Thu 17 Nov 2022 09:51:02 AM CST -------------- ----------------------- mri_surf2surf --srcsubject sub057 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.477763/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.w-g.pct.mgh --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --srcsubject sub057 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.477763/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.w-g.pct.mgh --sfmt curv --noreshape --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = sub057 srcval = /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.w-g.pct.mgh srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.477763/sub057.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Loading source data Reading curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.w-g.pct.mgh Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (136762) Reverse Loop had 23604 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 145808, nTrgMulti = 18034, MnTrgMultiHits = 2.30886 nSrc121 = 98143, nSrcLost = 0, nSrcMulti = 38619, MnSrcMultiHits = 2.31241 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.477763/sub057.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.477763/sub057.1.mgh --o rh.w-g.pct.mgh.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to rh.w-g.pct.mgh.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.477763 Thu 17 Nov 2022 09:51:08 AM CST mris_preproc done #-------------------------------------------- #@# Qdec Cache surf2surf lh thickness fwhm0 fsaverage Thu 17 Nov 2022 09:51:08 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.thickness.fsaverage.mgh --tval lh.thickness.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.thickness.fsaverage.mgh --tval lh.thickness.fwhm0.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.thickness.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.thickness.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label lh.cortex.label masking the input Saving target data Saving to lh.thickness.fwhm0.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh thickness fwhm5 fsaverage Thu 17 Nov 2022 09:51:11 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.thickness.fsaverage.mgh --tval lh.thickness.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.thickness.fsaverage.mgh --tval lh.thickness.fwhm5.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.thickness.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.thickness.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to lh.thickness.fwhm5.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh thickness fwhm10 fsaverage Thu 17 Nov 2022 09:51:16 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.thickness.fsaverage.mgh --tval lh.thickness.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.thickness.fsaverage.mgh --tval lh.thickness.fwhm10.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.thickness.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.thickness.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to lh.thickness.fwhm10.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh thickness fwhm15 fsaverage Thu 17 Nov 2022 09:51:22 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.thickness.fsaverage.mgh --tval lh.thickness.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.thickness.fsaverage.mgh --tval lh.thickness.fwhm15.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.thickness.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.thickness.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 165 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 165 Saving target data Saving to lh.thickness.fwhm15.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh thickness fwhm20 fsaverage Thu 17 Nov 2022 09:51:28 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.thickness.fsaverage.mgh --tval lh.thickness.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.thickness.fsaverage.mgh --tval lh.thickness.fwhm20.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.thickness.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.thickness.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to lh.thickness.fwhm20.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh thickness fwhm25 fsaverage Thu 17 Nov 2022 09:51:35 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.thickness.fsaverage.mgh --tval lh.thickness.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.thickness.fsaverage.mgh --tval lh.thickness.fwhm25.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.thickness.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.thickness.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to lh.thickness.fwhm25.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh area fwhm0 fsaverage Thu 17 Nov 2022 09:51:42 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.area.fsaverage.mgh --tval lh.area.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.area.fsaverage.mgh --tval lh.area.fwhm0.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.area.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.area.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label lh.cortex.label masking the input Saving target data Saving to lh.area.fwhm0.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh area fwhm5 fsaverage Thu 17 Nov 2022 09:51:44 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.area.fsaverage.mgh --tval lh.area.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.area.fsaverage.mgh --tval lh.area.fwhm5.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.area.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.area.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to lh.area.fwhm5.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh area fwhm10 fsaverage Thu 17 Nov 2022 09:51:49 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.area.fsaverage.mgh --tval lh.area.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.area.fsaverage.mgh --tval lh.area.fwhm10.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.area.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.area.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to lh.area.fwhm10.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh area fwhm15 fsaverage Thu 17 Nov 2022 09:51:54 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.area.fsaverage.mgh --tval lh.area.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.area.fsaverage.mgh --tval lh.area.fwhm15.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.area.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.area.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 165 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 165 Saving target data Saving to lh.area.fwhm15.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh area fwhm20 fsaverage Thu 17 Nov 2022 09:52:00 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.area.fsaverage.mgh --tval lh.area.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.area.fsaverage.mgh --tval lh.area.fwhm20.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.area.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.area.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to lh.area.fwhm20.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh area fwhm25 fsaverage Thu 17 Nov 2022 09:52:05 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.area.fsaverage.mgh --tval lh.area.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.area.fsaverage.mgh --tval lh.area.fwhm25.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.area.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.area.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to lh.area.fwhm25.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh area.pial fwhm0 fsaverage Thu 17 Nov 2022 09:52:11 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.area.pial.fsaverage.mgh --tval lh.area.pial.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.area.pial.fsaverage.mgh --tval lh.area.pial.fwhm0.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.area.pial.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.area.pial.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label lh.cortex.label masking the input Saving target data Saving to lh.area.pial.fwhm0.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh area.pial fwhm5 fsaverage Thu 17 Nov 2022 09:52:14 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.area.pial.fsaverage.mgh --tval lh.area.pial.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.area.pial.fsaverage.mgh --tval lh.area.pial.fwhm5.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.area.pial.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.area.pial.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to lh.area.pial.fwhm5.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh area.pial fwhm10 fsaverage Thu 17 Nov 2022 09:52:19 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.area.pial.fsaverage.mgh --tval lh.area.pial.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.area.pial.fsaverage.mgh --tval lh.area.pial.fwhm10.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.area.pial.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.area.pial.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to lh.area.pial.fwhm10.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh area.pial fwhm15 fsaverage Thu 17 Nov 2022 09:52:25 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.area.pial.fsaverage.mgh --tval lh.area.pial.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.area.pial.fsaverage.mgh --tval lh.area.pial.fwhm15.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.area.pial.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.area.pial.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 165 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 165 Saving target data Saving to lh.area.pial.fwhm15.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh area.pial fwhm20 fsaverage Thu 17 Nov 2022 09:52:31 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.area.pial.fsaverage.mgh --tval lh.area.pial.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.area.pial.fsaverage.mgh --tval lh.area.pial.fwhm20.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.area.pial.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.area.pial.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to lh.area.pial.fwhm20.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh area.pial fwhm25 fsaverage Thu 17 Nov 2022 09:52:38 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.area.pial.fsaverage.mgh --tval lh.area.pial.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.area.pial.fsaverage.mgh --tval lh.area.pial.fwhm25.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.area.pial.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.area.pial.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to lh.area.pial.fwhm25.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh volume fwhm0 fsaverage Thu 17 Nov 2022 09:52:47 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.volume.fsaverage.mgh --tval lh.volume.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.volume.fsaverage.mgh --tval lh.volume.fwhm0.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.volume.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.volume.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label lh.cortex.label masking the input Saving target data Saving to lh.volume.fwhm0.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh volume fwhm5 fsaverage Thu 17 Nov 2022 09:52:50 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.volume.fsaverage.mgh --tval lh.volume.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.volume.fsaverage.mgh --tval lh.volume.fwhm5.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.volume.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.volume.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to lh.volume.fwhm5.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh volume fwhm10 fsaverage Thu 17 Nov 2022 09:52:57 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.volume.fsaverage.mgh --tval lh.volume.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.volume.fsaverage.mgh --tval lh.volume.fwhm10.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.volume.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.volume.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to lh.volume.fwhm10.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh volume fwhm15 fsaverage Thu 17 Nov 2022 09:53:03 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.volume.fsaverage.mgh --tval lh.volume.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.volume.fsaverage.mgh --tval lh.volume.fwhm15.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.volume.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.volume.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 165 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 165 Saving target data Saving to lh.volume.fwhm15.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh volume fwhm20 fsaverage Thu 17 Nov 2022 09:53:10 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.volume.fsaverage.mgh --tval lh.volume.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.volume.fsaverage.mgh --tval lh.volume.fwhm20.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.volume.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.volume.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to lh.volume.fwhm20.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh volume fwhm25 fsaverage Thu 17 Nov 2022 09:53:19 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.volume.fsaverage.mgh --tval lh.volume.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.volume.fsaverage.mgh --tval lh.volume.fwhm25.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.volume.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.volume.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to lh.volume.fwhm25.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh curv fwhm0 fsaverage Thu 17 Nov 2022 09:53:27 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.curv.fsaverage.mgh --tval lh.curv.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.curv.fsaverage.mgh --tval lh.curv.fwhm0.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.curv.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.curv.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label lh.cortex.label masking the input Saving target data Saving to lh.curv.fwhm0.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh curv fwhm5 fsaverage Thu 17 Nov 2022 09:53:30 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.curv.fsaverage.mgh --tval lh.curv.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.curv.fsaverage.mgh --tval lh.curv.fwhm5.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.curv.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.curv.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to lh.curv.fwhm5.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh curv fwhm10 fsaverage Thu 17 Nov 2022 09:53:37 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.curv.fsaverage.mgh --tval lh.curv.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.curv.fsaverage.mgh --tval lh.curv.fwhm10.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.curv.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.curv.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to lh.curv.fwhm10.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh curv fwhm15 fsaverage Thu 17 Nov 2022 09:53:43 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.curv.fsaverage.mgh --tval lh.curv.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.curv.fsaverage.mgh --tval lh.curv.fwhm15.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.curv.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.curv.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 165 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 165 Saving target data Saving to lh.curv.fwhm15.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh curv fwhm20 fsaverage Thu 17 Nov 2022 09:53:50 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.curv.fsaverage.mgh --tval lh.curv.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.curv.fsaverage.mgh --tval lh.curv.fwhm20.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.curv.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.curv.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to lh.curv.fwhm20.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh curv fwhm25 fsaverage Thu 17 Nov 2022 09:53:57 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.curv.fsaverage.mgh --tval lh.curv.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.curv.fsaverage.mgh --tval lh.curv.fwhm25.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.curv.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.curv.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to lh.curv.fwhm25.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh sulc fwhm0 fsaverage Thu 17 Nov 2022 09:54:06 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.sulc.fsaverage.mgh --tval lh.sulc.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.sulc.fsaverage.mgh --tval lh.sulc.fwhm0.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.sulc.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.sulc.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label lh.cortex.label masking the input Saving target data Saving to lh.sulc.fwhm0.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh sulc fwhm5 fsaverage Thu 17 Nov 2022 09:54:09 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.sulc.fsaverage.mgh --tval lh.sulc.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.sulc.fsaverage.mgh --tval lh.sulc.fwhm5.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.sulc.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.sulc.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to lh.sulc.fwhm5.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh sulc fwhm10 fsaverage Thu 17 Nov 2022 09:54:16 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.sulc.fsaverage.mgh --tval lh.sulc.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.sulc.fsaverage.mgh --tval lh.sulc.fwhm10.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.sulc.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.sulc.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to lh.sulc.fwhm10.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh sulc fwhm15 fsaverage Thu 17 Nov 2022 09:54:23 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.sulc.fsaverage.mgh --tval lh.sulc.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.sulc.fsaverage.mgh --tval lh.sulc.fwhm15.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.sulc.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.sulc.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 165 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 165 Saving target data Saving to lh.sulc.fwhm15.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh sulc fwhm20 fsaverage Thu 17 Nov 2022 09:54:28 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.sulc.fsaverage.mgh --tval lh.sulc.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.sulc.fsaverage.mgh --tval lh.sulc.fwhm20.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.sulc.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.sulc.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to lh.sulc.fwhm20.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh sulc fwhm25 fsaverage Thu 17 Nov 2022 09:54:33 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.sulc.fsaverage.mgh --tval lh.sulc.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.sulc.fsaverage.mgh --tval lh.sulc.fwhm25.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.sulc.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.sulc.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to lh.sulc.fwhm25.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh white.K fwhm0 fsaverage Thu 17 Nov 2022 09:54:38 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.white.K.fsaverage.mgh --tval lh.white.K.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.white.K.fsaverage.mgh --tval lh.white.K.fwhm0.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.white.K.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.white.K.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label lh.cortex.label masking the input Saving target data Saving to lh.white.K.fwhm0.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh white.K fwhm5 fsaverage Thu 17 Nov 2022 09:54:40 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.white.K.fsaverage.mgh --tval lh.white.K.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.white.K.fsaverage.mgh --tval lh.white.K.fwhm5.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.white.K.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.white.K.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to lh.white.K.fwhm5.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh white.K fwhm10 fsaverage Thu 17 Nov 2022 09:54:44 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.white.K.fsaverage.mgh --tval lh.white.K.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.white.K.fsaverage.mgh --tval lh.white.K.fwhm10.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.white.K.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.white.K.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to lh.white.K.fwhm10.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh white.K fwhm15 fsaverage Thu 17 Nov 2022 09:54:48 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.white.K.fsaverage.mgh --tval lh.white.K.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.white.K.fsaverage.mgh --tval lh.white.K.fwhm15.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.white.K.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.white.K.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 165 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 165 Saving target data Saving to lh.white.K.fwhm15.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh white.K fwhm20 fsaverage Thu 17 Nov 2022 09:54:52 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.white.K.fsaverage.mgh --tval lh.white.K.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.white.K.fsaverage.mgh --tval lh.white.K.fwhm20.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.white.K.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.white.K.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to lh.white.K.fwhm20.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh white.K fwhm25 fsaverage Thu 17 Nov 2022 09:54:57 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.white.K.fsaverage.mgh --tval lh.white.K.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.white.K.fsaverage.mgh --tval lh.white.K.fwhm25.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.white.K.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.white.K.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to lh.white.K.fwhm25.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh white.H fwhm0 fsaverage Thu 17 Nov 2022 09:55:02 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.white.H.fsaverage.mgh --tval lh.white.H.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.white.H.fsaverage.mgh --tval lh.white.H.fwhm0.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.white.H.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.white.H.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label lh.cortex.label masking the input Saving target data Saving to lh.white.H.fwhm0.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh white.H fwhm5 fsaverage Thu 17 Nov 2022 09:55:03 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.white.H.fsaverage.mgh --tval lh.white.H.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.white.H.fsaverage.mgh --tval lh.white.H.fwhm5.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.white.H.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.white.H.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to lh.white.H.fwhm5.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh white.H fwhm10 fsaverage Thu 17 Nov 2022 09:55:07 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.white.H.fsaverage.mgh --tval lh.white.H.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.white.H.fsaverage.mgh --tval lh.white.H.fwhm10.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.white.H.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.white.H.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to lh.white.H.fwhm10.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh white.H fwhm15 fsaverage Thu 17 Nov 2022 09:55:13 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.white.H.fsaverage.mgh --tval lh.white.H.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.white.H.fsaverage.mgh --tval lh.white.H.fwhm15.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.white.H.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.white.H.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 165 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 165 Saving target data Saving to lh.white.H.fwhm15.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh white.H fwhm20 fsaverage Thu 17 Nov 2022 09:55:19 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.white.H.fsaverage.mgh --tval lh.white.H.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.white.H.fsaverage.mgh --tval lh.white.H.fwhm20.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.white.H.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.white.H.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to lh.white.H.fwhm20.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh white.H fwhm25 fsaverage Thu 17 Nov 2022 09:55:26 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.white.H.fsaverage.mgh --tval lh.white.H.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.white.H.fsaverage.mgh --tval lh.white.H.fwhm25.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.white.H.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.white.H.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to lh.white.H.fwhm25.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh jacobian_white fwhm0 fsaverage Thu 17 Nov 2022 09:55:32 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.jacobian_white.fsaverage.mgh --tval lh.jacobian_white.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.jacobian_white.fsaverage.mgh --tval lh.jacobian_white.fwhm0.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.jacobian_white.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.jacobian_white.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label lh.cortex.label masking the input Saving target data Saving to lh.jacobian_white.fwhm0.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh jacobian_white fwhm5 fsaverage Thu 17 Nov 2022 09:55:35 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.jacobian_white.fsaverage.mgh --tval lh.jacobian_white.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.jacobian_white.fsaverage.mgh --tval lh.jacobian_white.fwhm5.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.jacobian_white.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.jacobian_white.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to lh.jacobian_white.fwhm5.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh jacobian_white fwhm10 fsaverage Thu 17 Nov 2022 09:55:40 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.jacobian_white.fsaverage.mgh --tval lh.jacobian_white.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.jacobian_white.fsaverage.mgh --tval lh.jacobian_white.fwhm10.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.jacobian_white.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.jacobian_white.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to lh.jacobian_white.fwhm10.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh jacobian_white fwhm15 fsaverage Thu 17 Nov 2022 09:55:45 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.jacobian_white.fsaverage.mgh --tval lh.jacobian_white.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.jacobian_white.fsaverage.mgh --tval lh.jacobian_white.fwhm15.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.jacobian_white.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.jacobian_white.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 165 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 165 Saving target data Saving to lh.jacobian_white.fwhm15.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh jacobian_white fwhm20 fsaverage Thu 17 Nov 2022 09:55:51 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.jacobian_white.fsaverage.mgh --tval lh.jacobian_white.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.jacobian_white.fsaverage.mgh --tval lh.jacobian_white.fwhm20.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.jacobian_white.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.jacobian_white.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to lh.jacobian_white.fwhm20.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh jacobian_white fwhm25 fsaverage Thu 17 Nov 2022 09:55:58 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.jacobian_white.fsaverage.mgh --tval lh.jacobian_white.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.jacobian_white.fsaverage.mgh --tval lh.jacobian_white.fwhm25.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.jacobian_white.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.jacobian_white.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to lh.jacobian_white.fwhm25.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh w-g.pct.mgh fwhm0 fsaverage Thu 17 Nov 2022 09:56:06 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.w-g.pct.mgh.fsaverage.mgh --tval lh.w-g.pct.mgh.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.w-g.pct.mgh.fsaverage.mgh --tval lh.w-g.pct.mgh.fwhm0.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.w-g.pct.mgh.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.w-g.pct.mgh.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label lh.cortex.label masking the input Saving target data Saving to lh.w-g.pct.mgh.fwhm0.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh w-g.pct.mgh fwhm5 fsaverage Thu 17 Nov 2022 09:56:09 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.w-g.pct.mgh.fsaverage.mgh --tval lh.w-g.pct.mgh.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.w-g.pct.mgh.fsaverage.mgh --tval lh.w-g.pct.mgh.fwhm5.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.w-g.pct.mgh.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.w-g.pct.mgh.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to lh.w-g.pct.mgh.fwhm5.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh w-g.pct.mgh fwhm10 fsaverage Thu 17 Nov 2022 09:56:15 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.w-g.pct.mgh.fsaverage.mgh --tval lh.w-g.pct.mgh.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.w-g.pct.mgh.fsaverage.mgh --tval lh.w-g.pct.mgh.fwhm10.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.w-g.pct.mgh.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.w-g.pct.mgh.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to lh.w-g.pct.mgh.fwhm10.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh w-g.pct.mgh fwhm15 fsaverage Thu 17 Nov 2022 09:56:21 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.w-g.pct.mgh.fsaverage.mgh --tval lh.w-g.pct.mgh.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.w-g.pct.mgh.fsaverage.mgh --tval lh.w-g.pct.mgh.fwhm15.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.w-g.pct.mgh.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.w-g.pct.mgh.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 165 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 165 Saving target data Saving to lh.w-g.pct.mgh.fwhm15.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh w-g.pct.mgh fwhm20 fsaverage Thu 17 Nov 2022 09:56:27 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.w-g.pct.mgh.fsaverage.mgh --tval lh.w-g.pct.mgh.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.w-g.pct.mgh.fsaverage.mgh --tval lh.w-g.pct.mgh.fwhm20.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.w-g.pct.mgh.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.w-g.pct.mgh.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to lh.w-g.pct.mgh.fwhm20.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh w-g.pct.mgh fwhm25 fsaverage Thu 17 Nov 2022 09:56:34 AM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.w-g.pct.mgh.fsaverage.mgh --tval lh.w-g.pct.mgh.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.w-g.pct.mgh.fsaverage.mgh --tval lh.w-g.pct.mgh.fwhm25.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.w-g.pct.mgh.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.w-g.pct.mgh.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to lh.w-g.pct.mgh.fwhm25.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh thickness fwhm0 fsaverage Thu 17 Nov 2022 09:56:41 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.thickness.fsaverage.mgh --tval rh.thickness.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.thickness.fsaverage.mgh --tval rh.thickness.fwhm0.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.thickness.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.thickness.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label rh.cortex.label masking the input Saving target data Saving to rh.thickness.fwhm0.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh thickness fwhm5 fsaverage Thu 17 Nov 2022 09:56:43 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.thickness.fsaverage.mgh --tval rh.thickness.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.thickness.fsaverage.mgh --tval rh.thickness.fwhm5.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.thickness.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.thickness.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to rh.thickness.fwhm5.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh thickness fwhm10 fsaverage Thu 17 Nov 2022 09:56:49 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.thickness.fsaverage.mgh --tval rh.thickness.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.thickness.fsaverage.mgh --tval rh.thickness.fwhm10.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.thickness.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.thickness.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to rh.thickness.fwhm10.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh thickness fwhm15 fsaverage Thu 17 Nov 2022 09:56:54 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.thickness.fsaverage.mgh --tval rh.thickness.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.thickness.fsaverage.mgh --tval rh.thickness.fwhm15.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.thickness.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.thickness.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 166 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 166 Saving target data Saving to rh.thickness.fwhm15.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh thickness fwhm20 fsaverage Thu 17 Nov 2022 09:57:00 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.thickness.fsaverage.mgh --tval rh.thickness.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.thickness.fsaverage.mgh --tval rh.thickness.fwhm20.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.thickness.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.thickness.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to rh.thickness.fwhm20.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh thickness fwhm25 fsaverage Thu 17 Nov 2022 09:57:07 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.thickness.fsaverage.mgh --tval rh.thickness.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.thickness.fsaverage.mgh --tval rh.thickness.fwhm25.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.thickness.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.thickness.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to rh.thickness.fwhm25.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh area fwhm0 fsaverage Thu 17 Nov 2022 09:57:16 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.area.fsaverage.mgh --tval rh.area.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.area.fsaverage.mgh --tval rh.area.fwhm0.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.area.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.area.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label rh.cortex.label masking the input Saving target data Saving to rh.area.fwhm0.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh area fwhm5 fsaverage Thu 17 Nov 2022 09:57:18 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.area.fsaverage.mgh --tval rh.area.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.area.fsaverage.mgh --tval rh.area.fwhm5.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.area.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.area.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to rh.area.fwhm5.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh area fwhm10 fsaverage Thu 17 Nov 2022 09:57:25 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.area.fsaverage.mgh --tval rh.area.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.area.fsaverage.mgh --tval rh.area.fwhm10.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.area.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.area.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to rh.area.fwhm10.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh area fwhm15 fsaverage Thu 17 Nov 2022 09:57:31 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.area.fsaverage.mgh --tval rh.area.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.area.fsaverage.mgh --tval rh.area.fwhm15.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.area.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.area.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 166 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 166 Saving target data Saving to rh.area.fwhm15.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh area fwhm20 fsaverage Thu 17 Nov 2022 09:57:37 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.area.fsaverage.mgh --tval rh.area.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.area.fsaverage.mgh --tval rh.area.fwhm20.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.area.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.area.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to rh.area.fwhm20.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh area fwhm25 fsaverage Thu 17 Nov 2022 09:57:44 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.area.fsaverage.mgh --tval rh.area.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.area.fsaverage.mgh --tval rh.area.fwhm25.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.area.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.area.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to rh.area.fwhm25.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh area.pial fwhm0 fsaverage Thu 17 Nov 2022 09:57:51 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.area.pial.fsaverage.mgh --tval rh.area.pial.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.area.pial.fsaverage.mgh --tval rh.area.pial.fwhm0.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.area.pial.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.area.pial.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label rh.cortex.label masking the input Saving target data Saving to rh.area.pial.fwhm0.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh area.pial fwhm5 fsaverage Thu 17 Nov 2022 09:57:53 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.area.pial.fsaverage.mgh --tval rh.area.pial.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.area.pial.fsaverage.mgh --tval rh.area.pial.fwhm5.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.area.pial.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.area.pial.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to rh.area.pial.fwhm5.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh area.pial fwhm10 fsaverage Thu 17 Nov 2022 09:57:59 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.area.pial.fsaverage.mgh --tval rh.area.pial.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.area.pial.fsaverage.mgh --tval rh.area.pial.fwhm10.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.area.pial.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.area.pial.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to rh.area.pial.fwhm10.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh area.pial fwhm15 fsaverage Thu 17 Nov 2022 09:58:05 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.area.pial.fsaverage.mgh --tval rh.area.pial.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.area.pial.fsaverage.mgh --tval rh.area.pial.fwhm15.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.area.pial.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.area.pial.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 166 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 166 Saving target data Saving to rh.area.pial.fwhm15.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh area.pial fwhm20 fsaverage Thu 17 Nov 2022 09:58:11 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.area.pial.fsaverage.mgh --tval rh.area.pial.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.area.pial.fsaverage.mgh --tval rh.area.pial.fwhm20.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.area.pial.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.area.pial.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to rh.area.pial.fwhm20.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh area.pial fwhm25 fsaverage Thu 17 Nov 2022 09:58:18 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.area.pial.fsaverage.mgh --tval rh.area.pial.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.area.pial.fsaverage.mgh --tval rh.area.pial.fwhm25.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.area.pial.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.area.pial.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to rh.area.pial.fwhm25.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh volume fwhm0 fsaverage Thu 17 Nov 2022 09:58:26 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.volume.fsaverage.mgh --tval rh.volume.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.volume.fsaverage.mgh --tval rh.volume.fwhm0.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.volume.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.volume.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label rh.cortex.label masking the input Saving target data Saving to rh.volume.fwhm0.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh volume fwhm5 fsaverage Thu 17 Nov 2022 09:58:29 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.volume.fsaverage.mgh --tval rh.volume.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.volume.fsaverage.mgh --tval rh.volume.fwhm5.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.volume.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.volume.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to rh.volume.fwhm5.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh volume fwhm10 fsaverage Thu 17 Nov 2022 09:58:35 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.volume.fsaverage.mgh --tval rh.volume.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.volume.fsaverage.mgh --tval rh.volume.fwhm10.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.volume.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.volume.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to rh.volume.fwhm10.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh volume fwhm15 fsaverage Thu 17 Nov 2022 09:58:41 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.volume.fsaverage.mgh --tval rh.volume.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.volume.fsaverage.mgh --tval rh.volume.fwhm15.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.volume.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.volume.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 166 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 166 Saving target data Saving to rh.volume.fwhm15.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh volume fwhm20 fsaverage Thu 17 Nov 2022 09:58:47 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.volume.fsaverage.mgh --tval rh.volume.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.volume.fsaverage.mgh --tval rh.volume.fwhm20.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.volume.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.volume.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to rh.volume.fwhm20.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh volume fwhm25 fsaverage Thu 17 Nov 2022 09:58:53 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.volume.fsaverage.mgh --tval rh.volume.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.volume.fsaverage.mgh --tval rh.volume.fwhm25.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.volume.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.volume.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to rh.volume.fwhm25.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh curv fwhm0 fsaverage Thu 17 Nov 2022 09:59:00 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.curv.fsaverage.mgh --tval rh.curv.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.curv.fsaverage.mgh --tval rh.curv.fwhm0.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.curv.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.curv.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label rh.cortex.label masking the input Saving target data Saving to rh.curv.fwhm0.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh curv fwhm5 fsaverage Thu 17 Nov 2022 09:59:03 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.curv.fsaverage.mgh --tval rh.curv.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.curv.fsaverage.mgh --tval rh.curv.fwhm5.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.curv.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.curv.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to rh.curv.fwhm5.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh curv fwhm10 fsaverage Thu 17 Nov 2022 09:59:08 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.curv.fsaverage.mgh --tval rh.curv.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.curv.fsaverage.mgh --tval rh.curv.fwhm10.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.curv.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.curv.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to rh.curv.fwhm10.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh curv fwhm15 fsaverage Thu 17 Nov 2022 09:59:14 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.curv.fsaverage.mgh --tval rh.curv.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.curv.fsaverage.mgh --tval rh.curv.fwhm15.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.curv.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.curv.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 166 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 166 Saving target data Saving to rh.curv.fwhm15.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh curv fwhm20 fsaverage Thu 17 Nov 2022 09:59:20 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.curv.fsaverage.mgh --tval rh.curv.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.curv.fsaverage.mgh --tval rh.curv.fwhm20.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.curv.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.curv.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to rh.curv.fwhm20.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh curv fwhm25 fsaverage Thu 17 Nov 2022 09:59:26 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.curv.fsaverage.mgh --tval rh.curv.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.curv.fsaverage.mgh --tval rh.curv.fwhm25.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.curv.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.curv.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to rh.curv.fwhm25.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh sulc fwhm0 fsaverage Thu 17 Nov 2022 09:59:33 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.sulc.fsaverage.mgh --tval rh.sulc.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.sulc.fsaverage.mgh --tval rh.sulc.fwhm0.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.sulc.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.sulc.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label rh.cortex.label masking the input Saving target data Saving to rh.sulc.fwhm0.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh sulc fwhm5 fsaverage Thu 17 Nov 2022 09:59:35 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.sulc.fsaverage.mgh --tval rh.sulc.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.sulc.fsaverage.mgh --tval rh.sulc.fwhm5.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.sulc.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.sulc.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to rh.sulc.fwhm5.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh sulc fwhm10 fsaverage Thu 17 Nov 2022 09:59:41 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.sulc.fsaverage.mgh --tval rh.sulc.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.sulc.fsaverage.mgh --tval rh.sulc.fwhm10.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.sulc.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.sulc.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to rh.sulc.fwhm10.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh sulc fwhm15 fsaverage Thu 17 Nov 2022 09:59:46 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.sulc.fsaverage.mgh --tval rh.sulc.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.sulc.fsaverage.mgh --tval rh.sulc.fwhm15.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.sulc.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.sulc.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 166 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 166 Saving target data Saving to rh.sulc.fwhm15.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh sulc fwhm20 fsaverage Thu 17 Nov 2022 09:59:52 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.sulc.fsaverage.mgh --tval rh.sulc.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.sulc.fsaverage.mgh --tval rh.sulc.fwhm20.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.sulc.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.sulc.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to rh.sulc.fwhm20.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh sulc fwhm25 fsaverage Thu 17 Nov 2022 09:59:59 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.sulc.fsaverage.mgh --tval rh.sulc.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.sulc.fsaverage.mgh --tval rh.sulc.fwhm25.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.sulc.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.sulc.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to rh.sulc.fwhm25.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh white.K fwhm0 fsaverage Thu 17 Nov 2022 10:00:06 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.white.K.fsaverage.mgh --tval rh.white.K.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.white.K.fsaverage.mgh --tval rh.white.K.fwhm0.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.white.K.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.white.K.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label rh.cortex.label masking the input Saving target data Saving to rh.white.K.fwhm0.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh white.K fwhm5 fsaverage Thu 17 Nov 2022 10:00:08 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.white.K.fsaverage.mgh --tval rh.white.K.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.white.K.fsaverage.mgh --tval rh.white.K.fwhm5.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.white.K.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.white.K.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to rh.white.K.fwhm5.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh white.K fwhm10 fsaverage Thu 17 Nov 2022 10:00:13 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.white.K.fsaverage.mgh --tval rh.white.K.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.white.K.fsaverage.mgh --tval rh.white.K.fwhm10.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.white.K.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.white.K.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to rh.white.K.fwhm10.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh white.K fwhm15 fsaverage Thu 17 Nov 2022 10:00:18 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.white.K.fsaverage.mgh --tval rh.white.K.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.white.K.fsaverage.mgh --tval rh.white.K.fwhm15.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.white.K.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.white.K.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 166 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 166 Saving target data Saving to rh.white.K.fwhm15.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh white.K fwhm20 fsaverage Thu 17 Nov 2022 10:00:24 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.white.K.fsaverage.mgh --tval rh.white.K.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.white.K.fsaverage.mgh --tval rh.white.K.fwhm20.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.white.K.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.white.K.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to rh.white.K.fwhm20.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh white.K fwhm25 fsaverage Thu 17 Nov 2022 10:00:30 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.white.K.fsaverage.mgh --tval rh.white.K.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.white.K.fsaverage.mgh --tval rh.white.K.fwhm25.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.white.K.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.white.K.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to rh.white.K.fwhm25.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh white.H fwhm0 fsaverage Thu 17 Nov 2022 10:00:37 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.white.H.fsaverage.mgh --tval rh.white.H.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.white.H.fsaverage.mgh --tval rh.white.H.fwhm0.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.white.H.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.white.H.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label rh.cortex.label masking the input Saving target data Saving to rh.white.H.fwhm0.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh white.H fwhm5 fsaverage Thu 17 Nov 2022 10:00:40 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.white.H.fsaverage.mgh --tval rh.white.H.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.white.H.fsaverage.mgh --tval rh.white.H.fwhm5.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.white.H.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.white.H.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to rh.white.H.fwhm5.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh white.H fwhm10 fsaverage Thu 17 Nov 2022 10:00:45 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.white.H.fsaverage.mgh --tval rh.white.H.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.white.H.fsaverage.mgh --tval rh.white.H.fwhm10.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.white.H.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.white.H.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to rh.white.H.fwhm10.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh white.H fwhm15 fsaverage Thu 17 Nov 2022 10:00:50 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.white.H.fsaverage.mgh --tval rh.white.H.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.white.H.fsaverage.mgh --tval rh.white.H.fwhm15.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.white.H.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.white.H.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 166 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 166 Saving target data Saving to rh.white.H.fwhm15.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh white.H fwhm20 fsaverage Thu 17 Nov 2022 10:00:54 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.white.H.fsaverage.mgh --tval rh.white.H.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.white.H.fsaverage.mgh --tval rh.white.H.fwhm20.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.white.H.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.white.H.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to rh.white.H.fwhm20.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh white.H fwhm25 fsaverage Thu 17 Nov 2022 10:00:58 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.white.H.fsaverage.mgh --tval rh.white.H.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.white.H.fsaverage.mgh --tval rh.white.H.fwhm25.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.white.H.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.white.H.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to rh.white.H.fwhm25.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh jacobian_white fwhm0 fsaverage Thu 17 Nov 2022 10:01:03 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.jacobian_white.fsaverage.mgh --tval rh.jacobian_white.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.jacobian_white.fsaverage.mgh --tval rh.jacobian_white.fwhm0.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.jacobian_white.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.jacobian_white.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label rh.cortex.label masking the input Saving target data Saving to rh.jacobian_white.fwhm0.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh jacobian_white fwhm5 fsaverage Thu 17 Nov 2022 10:01:05 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.jacobian_white.fsaverage.mgh --tval rh.jacobian_white.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.jacobian_white.fsaverage.mgh --tval rh.jacobian_white.fwhm5.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.jacobian_white.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.jacobian_white.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to rh.jacobian_white.fwhm5.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh jacobian_white fwhm10 fsaverage Thu 17 Nov 2022 10:01:10 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.jacobian_white.fsaverage.mgh --tval rh.jacobian_white.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.jacobian_white.fsaverage.mgh --tval rh.jacobian_white.fwhm10.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.jacobian_white.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.jacobian_white.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to rh.jacobian_white.fwhm10.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh jacobian_white fwhm15 fsaverage Thu 17 Nov 2022 10:01:15 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.jacobian_white.fsaverage.mgh --tval rh.jacobian_white.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.jacobian_white.fsaverage.mgh --tval rh.jacobian_white.fwhm15.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.jacobian_white.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.jacobian_white.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 166 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 166 Saving target data Saving to rh.jacobian_white.fwhm15.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh jacobian_white fwhm20 fsaverage Thu 17 Nov 2022 10:01:21 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.jacobian_white.fsaverage.mgh --tval rh.jacobian_white.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.jacobian_white.fsaverage.mgh --tval rh.jacobian_white.fwhm20.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.jacobian_white.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.jacobian_white.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to rh.jacobian_white.fwhm20.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh jacobian_white fwhm25 fsaverage Thu 17 Nov 2022 10:01:27 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.jacobian_white.fsaverage.mgh --tval rh.jacobian_white.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.jacobian_white.fsaverage.mgh --tval rh.jacobian_white.fwhm25.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.jacobian_white.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.jacobian_white.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to rh.jacobian_white.fwhm25.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh w-g.pct.mgh fwhm0 fsaverage Thu 17 Nov 2022 10:01:34 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.w-g.pct.mgh.fsaverage.mgh --tval rh.w-g.pct.mgh.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.w-g.pct.mgh.fsaverage.mgh --tval rh.w-g.pct.mgh.fwhm0.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.w-g.pct.mgh.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.w-g.pct.mgh.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label rh.cortex.label masking the input Saving target data Saving to rh.w-g.pct.mgh.fwhm0.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh w-g.pct.mgh fwhm5 fsaverage Thu 17 Nov 2022 10:01:36 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.w-g.pct.mgh.fsaverage.mgh --tval rh.w-g.pct.mgh.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.w-g.pct.mgh.fsaverage.mgh --tval rh.w-g.pct.mgh.fwhm5.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.w-g.pct.mgh.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.w-g.pct.mgh.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to rh.w-g.pct.mgh.fwhm5.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh w-g.pct.mgh fwhm10 fsaverage Thu 17 Nov 2022 10:01:41 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.w-g.pct.mgh.fsaverage.mgh --tval rh.w-g.pct.mgh.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.w-g.pct.mgh.fsaverage.mgh --tval rh.w-g.pct.mgh.fwhm10.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.w-g.pct.mgh.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.w-g.pct.mgh.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to rh.w-g.pct.mgh.fwhm10.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh w-g.pct.mgh fwhm15 fsaverage Thu 17 Nov 2022 10:01:47 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.w-g.pct.mgh.fsaverage.mgh --tval rh.w-g.pct.mgh.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.w-g.pct.mgh.fsaverage.mgh --tval rh.w-g.pct.mgh.fwhm15.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.w-g.pct.mgh.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.w-g.pct.mgh.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 166 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 166 Saving target data Saving to rh.w-g.pct.mgh.fwhm15.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh w-g.pct.mgh fwhm20 fsaverage Thu 17 Nov 2022 10:01:53 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.w-g.pct.mgh.fsaverage.mgh --tval rh.w-g.pct.mgh.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.w-g.pct.mgh.fsaverage.mgh --tval rh.w-g.pct.mgh.fwhm20.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.w-g.pct.mgh.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.w-g.pct.mgh.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to rh.w-g.pct.mgh.fwhm20.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh w-g.pct.mgh fwhm25 fsaverage Thu 17 Nov 2022 10:01:59 AM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.w-g.pct.mgh.fsaverage.mgh --tval rh.w-g.pct.mgh.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.w-g.pct.mgh.fsaverage.mgh --tval rh.w-g.pct.mgh.fwhm25.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.w-g.pct.mgh.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.w-g.pct.mgh.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to rh.w-g.pct.mgh.fwhm25.fsaverage.mgh Started at Thu 17 Nov 2022 01:39:30 AM CST Ended at Thu 17 Nov 2022 10:02:06 AM CST #@#%# recon-all-run-time-hours 8.377 recon-all -s sub057 finished without error at Thu 17 Nov 2022 10:02:06 AM CST New invocation of recon-all Mon 21 Nov 2022 05:37:18 PM CST /home/shenkang/Desktop/T1/RESULTS/sub057 /opt/freesurfer/bin/recon-all -s sub057 -localGI subjid sub057 setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Actual FREESURFER_HOME /opt/freesurfer build-stamp.txt: freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c Linux shenkang-B560M-AORUS-ELITE 5.15.0-46-generic #49~20.04.1-Ubuntu SMP Thu Aug 4 19:15:44 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux cputime unlimited filesize unlimited datasize unlimited stacksize 8192 kbytes coredumpsize 0 kbytes memoryuse unlimited vmemoryuse unlimited descriptors 1024 memorylocked 65536 kbytes maxproc 63166 maxlocks unlimited maxsignal 63166 maxmessage 819200 maxnice 0 maxrtprio 0 maxrttime unlimited total used free shared buff/cache available Mem: 16247172 3739544 2907464 9892 9600164 12159052 Swap: 15999996 993024 15006972 ######################################## program versions used $Id: recon-all,v 1.580.2.16 2017/01/18 14:11:24 zkaufman Exp $ $Id: mri_motion_correct.fsl,v 1.15 2016/02/16 17:17:20 zkaufman Exp $ mri_convert.bin -all-info ProgramName: mri_convert.bin ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/21-09:37:18-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 FLIRT version 5.5 $Id: talairach_avi,v 1.13 2015/12/23 04:25:17 greve Exp $ mri_convert.bin --version stable6 ProgramName: tkregister2_cmdl ProgramArguments: --all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/21-09:37:18-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: tkregister2.c,v 1.132.2.1 2016/08/02 21:17:29 greve Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 Program nu_correct, built from: Package MNI N3, version 1.12.0, compiled by nicks@terrier (x86_64-unknown-linux-gnu) on 2015-06-19 at 01:25:34 ProgramName: mri_make_uchar ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/21-09:37:18-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_make_uchar.c,v 1.4 2011/03/02 00:04:14 nicks Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_normalize ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/21-09:37:18-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_normalize.c,v 1.88.2.3 2016/12/27 16:47:13 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_watershed ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/21-09:37:18-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_watershed.cpp,v 1.103 2016/06/17 18:00:49 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_gcut ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/21-09:37:18-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_gcut.cpp,v 1.14 2011/03/02 00:04:16 nicks Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_segment ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_segment.c,v 1.43.2.1 2016/10/27 22:24:52 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_label2label.bin ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_label2label.c,v 1.48.2.2 2016/12/12 14:15:26 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_em_register ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_em_register.c,v 1.105.2.1 2016/10/27 22:25:10 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_ca_normalize ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_ca_normalize.c,v 1.67.2.2 2016/10/27 22:25:09 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_ca_register ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_ca_register.c,v 1.96.2.3 2016/10/27 22:25:10 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_ca_label ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_ca_label.c,v 1.113.2.2 2016/10/27 22:25:10 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_pretess ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_pretess.c,v 1.22 2013/08/30 18:12:25 mreuter Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_fill ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_fill.c,v 1.119 2011/10/25 14:09:58 fischl Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_tessellate ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_tessellate.c,v 1.38.2.1 2016/07/26 18:46:38 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_concatenate_lta.bin ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_concatenate_lta.c,v 1.16 2015/11/21 00:06:20 greve Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_normalize_tp2 ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_normalize_tp2.c,v 1.8 2011/03/02 00:04:23 nicks Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_smooth ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_smooth.c,v 1.30 2014/01/21 18:48:21 fischl Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_inflate ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_inflate.c,v 1.45 2016/01/20 23:42:15 greve Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_curvature ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_curvature.c,v 1.31 2011/03/02 00:04:30 nicks Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_sphere ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_sphere.c,v 1.61 2016/01/20 23:42:15 greve Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_fix_topology ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_fix_topology.c,v 1.50.2.1 2016/10/27 22:25:58 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_topo_fixer ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_topo_fixer.cpp,v 1.29 2011/03/02 00:04:34 nicks Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_ca_label ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_ca_label.c,v 1.37 2014/02/04 17:46:42 fischl Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_euler_number ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_euler_number.c,v 1.10 2013/01/14 22:39:14 greve Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_make_surfaces ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_make_surfaces.c,v 1.164.2.4 2016/12/13 22:26:32 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_register ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_register.c,v 1.63 2016/01/20 23:43:04 greve Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_volmask ProgramArguments: --all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_volmask.cpp,v 1.26.2.2 2016/11/18 20:05:18 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_anatomical_stats ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_anatomical_stats.c,v 1.79 2016/03/14 15:15:34 greve Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mrisp_paint ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mrisp_paint.c,v 1.12 2016/03/22 14:47:57 fischl Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_curvature_stats ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_curvature_stats.c,v 1.65 2015/06/04 20:50:51 nicks Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_calc ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_calc.c,v 1.54.2.1 2016/09/27 18:51:28 greve Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 $Id: mri_robust_register.cpp,v 1.77 2016/01/20 23:36:17 greve Exp $ ProgramName: mri_robust_register.bin ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_robust_register.cpp,v 1.77 2016/01/20 23:36:17 greve Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 $Id: mri_robust_template.cpp,v 1.54 2016/05/05 21:17:08 mreuter Exp $ ProgramName: mri_robust_template ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_robust_template.cpp,v 1.54 2016/05/05 21:17:08 mreuter Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_and ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_and.c,v 1.4 2011/03/02 00:04:13 nicks Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_or ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_or.c,v 1.5 2013/03/20 15:03:29 lzollei Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_fuse_segmentations ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_fuse_segmentations.c,v 1.8 2011/03/02 00:04:15 nicks Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_segstats ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_relabel_hypointensities ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/21-09:37:19-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_relabel_hypointensities.c,v 1.13 2015/05/15 18:44:10 nicks Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ####################################### GCADIR /opt/freesurfer/average GCA RB_all_2016-05-10.vc700.gca GCASkull RB_all_withskull_2016-05-10.vc700.gca AvgCurvTif folding.atlas.acfb40.noaparc.i12.2016-08-02.tif GCSDIR /opt/freesurfer/average GCS DKaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs ####################################### /home/shenkang/Desktop/T1/RESULTS/sub057/surf #-------------------------------------------- #@# Local Gyrification Index lh Mon 21 Nov 2022 05:37:19 PM CST mris_compute_lgi --i lh.pial ================= rm -Rf /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial ================= ================= mkdir -p /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial ================= ================= mris_fill -c -r 1 lh.pial /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.filled.mgz ================= reading surface from lh.pial... writing filled volume to /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.filled.mgz... conforming output volume setting resolution for intermediate calculations to 1.0000 ================= make_outer_surface('/home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.filled.mgz',15,'/home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial-outer'); exit ================= < M A T L A B (R) > Copyright 1984-2018 The MathWorks, Inc. R2018b (9.5.0.944444) 64-bit (glnxa64) August 28, 2018 For online documentation, see https://www.mathworks.com/support For product information, visit www.mathworks.com. >> reading filled volume... closing volume... morphological closing done. writing outer surface... ================= mris_extract_main_component /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial-outer /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial-outer-main ================= counting number of connected components... 64562 voxel in cpt #1: X=2 [v=64562,e=193680,f=129120] located at (-28.439899, 0.661738, 23.622858) For the whole surface: X=2 [v=64562,e=193680,f=129120] One single component has been found nothing to do done ================= mris_smooth -nw -n 30 /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial-outer-main ./lh.pial-outer-smoothed ================= smoothing for 30 iterations smoothing surface tessellation for 30 iterations... smoothing complete - recomputing first and second fundamental forms... ================= mris_euler_number ./lh.pial-outer-smoothed ================= euler # = v-e+f = 2g-2: 64562 - 193680 + 129120 = 2 --> 0 holes F =2V-4: 129120 = 129124-4 (0) 2E=3F: 387360 = 387360 (0) total defect index = 0 ================= mris_convert -n lh.pial-outer-smoothed /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial-outer-smoothed-normals.asc ================= ================= find_corresponding_center_FSformat('lh.pial','lh.pial-outer-smoothed',100,'/home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial','/tmp/mrc_1490745_.m'); exit ================= < M A T L A B (R) > Copyright 1984-2018 The MathWorks, Inc. R2018b (9.5.0.944444) 64-bit (glnxa64) August 28, 2018 For online documentation, see https://www.mathworks.com/support For product information, visit www.mathworks.com. >> FREESURFER_READ_SURF [v 1.2 ] ...reading surface file: lh.pial ...reading triangle file ...adding 1 to face indices for matlab compatibility. ...done ( 0.02 sec) FREESURFER_READ_SURF [v 1.2 ] ...reading surface file: lh.pial-outer-smoothed ...reading triangle file ...adding 1 to face indices for matlab compatibility. ...done ( 0.01 sec) deltaT = 1.4700 ================= make_roi_paths('lh.pial','lh.pial-outer-smoothed',25,100,'/home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial','/tmp/mrp_1490745_.m'); exit ================= < M A T L A B (R) > Copyright 1984-2018 The MathWorks, Inc. R2018b (9.5.0.944444) 64-bit (glnxa64) August 28, 2018 For online documentation, see https://www.mathworks.com/support For product information, visit www.mathworks.com. >> loading datas ... FREESURFER_READ_SURF [v 1.2 ] ...reading surface file: lh.pial ...reading triangle file ...adding 1 to face indices for matlab compatibility. ...done ( 0.02 sec) FREESURFER_READ_SURF [v 1.2 ] ...reading surface file: lh.pial-outer-smoothed ...reading triangle file ...adding 1 to face indices for matlab compatibility. ...done ( 0.01 sec) preparing outer mesh structure ... face 5000 / 129120 face 10000 / 129120 face 15000 / 129120 face 20000 / 129120 face 25000 / 129120 face 30000 / 129120 face 35000 / 129120 face 40000 / 129120 face 45000 / 129120 face 50000 / 129120 face 55000 / 129120 face 60000 / 129120 face 65000 / 129120 face 70000 / 129120 face 75000 / 129120 face 80000 / 129120 face 85000 / 129120 face 90000 / 129120 face 95000 / 129120 face 100000 / 129120 face 105000 / 129120 face 110000 / 129120 face 115000 / 129120 face 120000 / 129120 face 125000 / 129120 mesh_outer = struct with fields: vertices: [64562x3 double] faces: [129120x3 double] facesOfVertex: [64562x1 struct] preparing pial mesh structure ... ...searching for mesh edges...done (64.72 sec). ... creating path file for vertex 1 / 64562 area file for outer ROIs saved at 1 ... creating path file for vertex 101 / 64562 ... creating path file for vertex 201 / 64562 ... creating path file for vertex 301 / 64562 ... creating path file for vertex 401 / 64562 ... creating path file for vertex 501 / 64562 ... creating path file for vertex 601 / 64562 ... creating path file for vertex 701 / 64562 ... creating path file for vertex 801 / 64562 ... creating path file for vertex 901 / 64562 ... creating path file for vertex 1001 / 64562 ... creating path file for vertex 1101 / 64562 ... creating path file for vertex 1201 / 64562 ... creating path file for vertex 1301 / 64562 ... creating path file for vertex 1401 / 64562 ... creating path file for vertex 1501 / 64562 ... creating path file for vertex 1601 / 64562 ... creating path file for vertex 1701 / 64562 ... creating path file for vertex 1801 / 64562 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regions removed from the patch ... creating path file for vertex 47001 / 64562 ... creating path file for vertex 47101 / 64562 ... creating path file for vertex 47201 / 64562 ... creating path file for vertex 47301 / 64562 ... creating path file for vertex 47401 / 64562 ... creating path file for vertex 47501 / 64562 ... creating path file for vertex 47601 / 64562 ... creating path file for vertex 47701 / 64562 ... creating path file for vertex 47801 / 64562 ... creating path file for vertex 47901 / 64562 ... creating path file for vertex 48001 / 64562 ... creating path file for vertex 48101 / 64562 ... creating path file for vertex 48201 / 64562 ... creating path file for vertex 48301 / 64562 ... creating path file for vertex 48401 / 64562 ... creating path file for vertex 48501 / 64562 ... creating path file for vertex 48601 / 64562 ... creating path file for vertex 48701 / 64562 ... creating path file for vertex 48801 / 64562 ... creating path file for vertex 48901 / 64562 ... creating path file for vertex 49001 / 64562 ... creating path file for vertex 49101 / 64562 ... creating path file for vertex 49201 / 64562 ... creating path file for vertex 49301 / 64562 ... creating path file for vertex 49401 / 64562 ... creating path file for vertex 49501 / 64562 ... creating path file for vertex 49601 / 64562 ... creating path file for vertex 49701 / 64562 ... creating path file for vertex 49801 / 64562 ... creating path file for vertex 49901 / 64562 ... creating path file for vertex 50001 / 64562 area file for outer ROIs saved at 50001 ... creating path file for vertex 50101 / 64562 ... creating path file for vertex 50201 / 64562 ... creating path file for vertex 50301 / 64562 ... creating path file for vertex 50401 / 64562 ... creating path file for vertex 50501 / 64562 ... creating path file for vertex 50601 / 64562 ... creating path file for vertex 50701 / 64562 ... creating path file for vertex 50801 / 64562 ... creating path file for vertex 50901 / 64562 ... creating path file for vertex 51001 / 64562 ... creating path file for vertex 51101 / 64562 ... creating path file for vertex 51201 / 64562 ... creating path file for vertex 51301 / 64562 ... creating path file for vertex 51401 / 64562 ... creating path file for vertex 51501 / 64562 ... creating path file for vertex 51601 / 64562 ... creating path file for vertex 51701 / 64562 ... creating path file for vertex 51801 / 64562 ... creating path file for vertex 51901 / 64562 ... creating path file for vertex 52001 / 64562 ... creating path file for vertex 52101 / 64562 ... creating path file for vertex 52201 / 64562 ... creating path file for vertex 52301 / 64562 ... creating path file for vertex 52401 / 64562 ... creating path file for vertex 52501 / 64562 ... creating path file for vertex 52601 / 64562 ... creating path file for vertex 52701 / 64562 ... creating path file for vertex 52801 / 64562 ... creating path file for vertex 52901 / 64562 ... creating path file for vertex 53001 / 64562 ... creating path file for vertex 53101 / 64562 ... creating path file for vertex 53201 / 64562 ... creating path file for vertex 53301 / 64562 ... creating path file for vertex 53401 / 64562 ... creating path file for vertex 53501 / 64562 ... creating path file for vertex 53601 / 64562 ... creating path file for vertex 53701 / 64562 ... creating path file for vertex 53801 / 64562 non geodesic regions removed from the patch ... creating path file for vertex 53901 / 64562 ... creating path file for vertex 54001 / 64562 ... creating path file for vertex 54101 / 64562 ... creating path file for vertex 54201 / 64562 ... creating path file for vertex 54301 / 64562 ... creating path file for vertex 54401 / 64562 ... creating path file for vertex 54501 / 64562 ... creating path file for vertex 54601 / 64562 ... creating path file for vertex 54701 / 64562 ... creating path file for vertex 54801 / 64562 ... creating path file for vertex 54901 / 64562 ... creating path file for vertex 55001 / 64562 area file for outer ROIs saved at 55001 ... creating path file for vertex 55101 / 64562 ... creating path file for vertex 55201 / 64562 ... creating path file for vertex 55301 / 64562 ... creating path file for vertex 55401 / 64562 ... creating path file for vertex 55501 / 64562 ... creating path file for vertex 55601 / 64562 ... creating path file for vertex 55701 / 64562 ... creating path file for vertex 55801 / 64562 ... creating path file for vertex 55901 / 64562 ... creating path file for vertex 56001 / 64562 ... creating path file for vertex 56101 / 64562 ... creating path file for vertex 56201 / 64562 ... creating path file for vertex 56301 / 64562 ... creating path file for vertex 56401 / 64562 ... creating path file for vertex 56501 / 64562 ... creating path file for vertex 56601 / 64562 ... creating path file for vertex 56701 / 64562 ... creating path file for vertex 56801 / 64562 ... creating path file for vertex 56901 / 64562 ... creating path file for vertex 57001 / 64562 ... creating path file for vertex 57101 / 64562 ... creating path file for vertex 57201 / 64562 ... creating path file for vertex 57301 / 64562 ... creating path file for vertex 57401 / 64562 ... creating path file for vertex 57501 / 64562 ... creating path file for vertex 57601 / 64562 ... creating path file for vertex 57701 / 64562 ... creating path file for vertex 57801 / 64562 ... creating path file for vertex 57901 / 64562 ... creating path file for vertex 58001 / 64562 ... creating path file for vertex 58101 / 64562 ... creating path file for vertex 58201 / 64562 ... creating path file for vertex 58301 / 64562 ... creating path file for vertex 58401 / 64562 ... creating path file for vertex 58501 / 64562 ... creating path file for vertex 58601 / 64562 ... creating path file for vertex 58701 / 64562 ... creating path file for vertex 58801 / 64562 ... creating path file for vertex 58901 / 64562 ... creating path file for vertex 59001 / 64562 ... creating path file for vertex 59101 / 64562 ... creating path file for vertex 59201 / 64562 ... creating path file for vertex 59301 / 64562 ... creating path file for vertex 59401 / 64562 ... creating path file for vertex 59501 / 64562 ... creating path file for vertex 59601 / 64562 ... creating path file for vertex 59701 / 64562 ... creating path file for vertex 59801 / 64562 ... creating path file for vertex 59901 / 64562 ... creating path file for vertex 60001 / 64562 area file for outer ROIs saved at 60001 ... creating path file for vertex 60101 / 64562 ... creating path file for vertex 60201 / 64562 ... creating path file for vertex 60301 / 64562 ... creating path file for vertex 60401 / 64562 ... creating path file for vertex 60501 / 64562 ... creating path file for vertex 60601 / 64562 ... creating path file for vertex 60701 / 64562 ... creating path file for vertex 60801 / 64562 ... creating path file for vertex 60901 / 64562 ... creating path file for vertex 61001 / 64562 ... creating path file for vertex 61101 / 64562 ... creating path file for vertex 61201 / 64562 ... creating path file for vertex 61301 / 64562 ... creating path file for vertex 61401 / 64562 ... creating path file for vertex 61501 / 64562 ... creating path file for vertex 61601 / 64562 ... creating path file for vertex 61701 / 64562 ... creating path file for vertex 61801 / 64562 ... creating path file for vertex 61901 / 64562 ... creating path file for vertex 62001 / 64562 ... creating path file for vertex 62101 / 64562 ... creating path file for vertex 62201 / 64562 ... creating path file for vertex 62301 / 64562 ... creating path file for vertex 62401 / 64562 ... creating path file for vertex 62501 / 64562 ... creating path file for vertex 62601 / 64562 ... creating path file for vertex 62701 / 64562 ... creating path file for vertex 62801 / 64562 ... creating path file for vertex 62901 / 64562 ... creating path file for vertex 63001 / 64562 ... creating path file for vertex 63101 / 64562 ... creating path file for vertex 63201 / 64562 ... creating path file for vertex 63301 / 64562 ... creating path file for vertex 63401 / 64562 ... creating path file for vertex 63501 / 64562 ... creating path file for vertex 63601 / 64562 ... creating path file for vertex 63701 / 64562 ... creating path file for vertex 63801 / 64562 ... creating path file for vertex 63901 / 64562 ... creating path file for vertex 64001 / 64562 ... creating path file for vertex 64101 / 64562 ... creating path file for vertex 64201 / 64562 ... creating path file for vertex 64301 / 64562 ... creating path file for vertex 64401 / 64562 ... creating path file for vertex 64501 / 64562 saving area file in matlab format... DONE. deltaT = 796.5600 ================= mri_path2label --confillxfn lh.pial /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/mri_path2label.input ================= Reading lh.pial Connecting and filling vertices in path at fillseed 36 Finding path............................................................................................................................................................................................. done Filling 36 nlabel 5476 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.000001.label Connecting and filling vertices in path at fillseed 226 Finding path.................................................................................................................................................................................................................................................................... done Filling 226 nlabel 7419 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.000101.label Connecting and filling vertices in path at fillseed 889 Finding path............................................................................................................................................................................... done Filling 889 nlabel 7629 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.000201.label Connecting and filling vertices in path at fillseed 624 Finding path....................................................................................................................................................................................................................... done Filling 624 nlabel 8050 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.000301.label Connecting and filling vertices in path at fillseed 113 Finding path......................................................................................................................................................................................................................................................... done Filling 113 nlabel 6064 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.000401.label Connecting and filling vertices in path at fillseed 403 Finding path.............................................................................................................................................................................................. done Filling 403 nlabel 6700 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.000501.label Connecting and filling vertices in path at fillseed 317 Finding path.................................................................................................................................................................................................. done Filling 317 nlabel 8187 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.000601.label Connecting and filling vertices in path at fillseed 578 Finding path................................................................................................................................................................................................................................................... done Filling 578 nlabel 8312 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.000701.label Connecting and filling vertices in path at fillseed 377 Finding path.................................................................................................................................................................................................. done Filling 377 nlabel 6022 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.000801.label Connecting and filling vertices in path at fillseed 1216 Finding path.................................................................................................................................................................................... done Filling 1216 nlabel 7565 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.000901.label Connecting and filling vertices in path at fillseed 684 Finding path.............................................................................................................................................................................................................................................................................................. done Filling 684 nlabel 6656 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.001001.label Connecting and filling vertices in path at fillseed 1307 Finding path............................................................................................................................................................................. done Filling 1307 nlabel 6201 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.001101.label Connecting and filling vertices in path at fillseed 1314 Finding path............................................................................................................................................................................................................................................ done Filling 1314 nlabel 8664 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.001201.label Connecting and filling vertices in path at fillseed 1206 Finding path................................................................................................................................................................................ done Filling 1206 nlabel 6144 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.001301.label Connecting and filling vertices in path at fillseed 765 Finding path............................................................................................................................................................................................................................. done Filling 765 nlabel 6363 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.001401.label Connecting and filling vertices in path at fillseed 859 Finding path.................................................................................................................................................................................................................................................................................. done Filling 859 nlabel 7534 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.001501.label Connecting and filling vertices in path at fillseed 1545 Finding path......................................................................................................................................................................................................... done Filling 1545 nlabel 5432 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.001601.label Connecting and filling vertices in path at fillseed 2921 Finding path.................................................................................................................................................................... done Filling 2921 nlabel 7191 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.001701.label Connecting and filling vertices in path at fillseed 1767 Finding path....................................................................................................................................................................... done Filling 1767 nlabel 6337 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.001801.label Connecting and filling vertices in path at fillseed 2261 Finding path............................................................................................................................................................ done Filling 2261 nlabel 5377 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.001901.label Connecting and filling vertices in path at fillseed 2405 Finding path........................................................................................................................................................................................................................................................................ done Filling 2405 nlabel 8079 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.002001.label Connecting and filling vertices in path at fillseed 2238 Finding path........................................................................................................................................................................................................................................................................................... done Filling 2238 nlabel 7203 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.002101.label Connecting and filling vertices in path at fillseed 1809 Finding path......................................................................................................................................................................................................................................................................................................................................................... done Filling 1809 nlabel 7222 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.002201.label Connecting and filling vertices in path at fillseed 3607 Finding path................................................................................................................................................................................................................................................................................ done Filling 3607 nlabel 8196 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.002301.label Connecting and filling vertices in path at fillseed 4377 Finding path................................................................................................................................................................................................................................................................................................................. done Filling 4377 nlabel 8294 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.002401.label Connecting and filling vertices in path at fillseed 4027 Finding path............................................................................................................................................................................................................. done Filling 4027 nlabel 7393 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.002501.label Connecting and filling vertices in path at fillseed 3658 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 3658 nlabel 6908 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.002601.label Connecting and filling vertices in path at fillseed 4965 Finding path......................................................................................................................................................................................................................................................................................................................... done Filling 4965 nlabel 9061 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.002701.label Connecting and filling vertices in path at fillseed 2961 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 2961 nlabel 8594 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.002801.label Connecting and filling vertices in path at fillseed 5243 Finding path............................................................................................................................................................................................................................................... done Filling 5243 nlabel 6982 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.002901.label Connecting and filling vertices in path at fillseed 5628 Finding path....................................................................................................................................................................................................................................................................................................................................................... done Filling 5628 nlabel 8780 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.003001.label Connecting and filling vertices in path at fillseed 4015 Finding path................................................................................................................................................................................................................................................... done Filling 4015 nlabel 6568 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.003101.label Connecting and filling vertices in path at fillseed 4564 Finding path...................................................................................................................................................................................................................................................... done Filling 4564 nlabel 7016 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.003201.label Connecting and filling vertices in path at fillseed 6892 Finding path............................................................................................................................................................................................................................................................................................... done Filling 6892 nlabel 8028 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.003301.label Connecting and filling vertices in path at fillseed 6499 Finding path.............................................................................................................................................................................................................................................................................................................. done Filling 6499 nlabel 5603 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.003401.label Connecting and filling vertices in path at fillseed 5841 Finding path....................................................................................................................................................................................................................................................................................................... done Filling 5841 nlabel 7486 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.003501.label Connecting and filling vertices in path at fillseed 6060 Finding path.................................................................................................................................................................................................................................................................................................................................................... done Filling 6060 nlabel 7816 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.003601.label Connecting and filling vertices in path at fillseed 5895 Finding path............................................................................................................................................................................................................................................................................................................ done Filling 5895 nlabel 6995 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.003701.label Connecting and filling vertices in path at fillseed 6492 Finding path............................................................................................................................................................................................................................................... done Filling 6492 nlabel 7315 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.003801.label Connecting and filling vertices in path at fillseed 6583 Finding path............................................................................................................................................................................................................................................................................... done Filling 6583 nlabel 7008 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.003901.label Connecting and filling vertices in path at fillseed 6876 Finding path.................................................................................................................................................................................................................................................................................... done Filling 6876 nlabel 8014 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.004001.label Connecting and filling vertices in path at fillseed 5747 Finding path......................................................................................................................................................................................... done Filling 5747 nlabel 6617 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.004101.label Connecting and filling vertices in path at fillseed 5804 Finding path..................................................................................................................................................................................... done Filling 5804 nlabel 6781 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.004201.label Connecting and filling vertices in path at fillseed 5744 Finding path..................................................................................................................................................................................................................................................................................................................................................... done Filling 5744 nlabel 8357 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.004301.label Connecting and filling vertices in path at fillseed 5345 Finding path........................................................................................................................................................................................................................................................................................................................................................................... done Filling 5345 nlabel 8060 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.004401.label Connecting and filling vertices in path at fillseed 7906 Finding path.................................................................................................................................................................................................................................................................................................................................................................... done Filling 7906 nlabel 8324 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.004501.label Connecting and filling vertices in path at fillseed 7299 Finding path................................................................................................................................................................................................................................................................................................................................................................................. done Filling 7299 nlabel 8258 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.004601.label Connecting and filling vertices in path at fillseed 9837 Finding path.................................................................................................................................................................................................................................................................................................................. done Filling 9837 nlabel 8088 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.004701.label Connecting and filling vertices in path at fillseed 8653 Finding path................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 8653 nlabel 7033 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.004801.label Connecting and filling vertices in path at fillseed 6443 Finding path...................................................................................................................................................................................................................................................................................... done Filling 6443 nlabel 7555 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.004901.label Connecting and filling vertices in path at fillseed 9673 Finding path..................................................................................................................................................................................................................................................................................................... done Filling 9673 nlabel 8322 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.005001.label Connecting and filling vertices in path at fillseed 8667 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 8667 nlabel 7751 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.005101.label Connecting and filling vertices in path at fillseed 9389 Finding path..................................................................................................................................................................................................................................................................................... done Filling 9389 nlabel 8662 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.005201.label Connecting and filling vertices in path at fillseed 11538 Finding path...................................................................................................................................................................................................................................................................................................................................................................................... done Filling 11538 nlabel 7268 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.005301.label Connecting and filling vertices in path at fillseed 10945 Finding path.................................................................................................................................................................................................................................................................................................................................................................................... done Filling 10945 nlabel 9456 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.005401.label Connecting and filling vertices in path at fillseed 9503 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 9503 nlabel 8205 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.005501.label Connecting and filling vertices in path at fillseed 7888 Finding path............................................................................................................................................................................................................................................................................................................... done Filling 7888 nlabel 9088 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.005601.label Connecting and filling vertices in path at fillseed 11525 Finding path.................................................................................................................................................................................................................................................................................................................................................... done Filling 11525 nlabel 7360 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.005701.label Connecting and filling vertices in path at fillseed 10928 Finding path......................................................................................................................................................................................................................................................................................................................... done Filling 10928 nlabel 9430 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.005801.label Connecting and filling vertices in path at fillseed 9661 Finding path................................................................................................................................................................................................................................................................................................................................................................... done Filling 9661 nlabel 10700 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.005901.label Connecting and filling vertices in path at fillseed 13215 Finding path................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 13215 nlabel 9801 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.006001.label Connecting and filling vertices in path at fillseed 13333 Finding path.................................................................................................................................................................................................................................................................................................... done Filling 13333 nlabel 7253 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.006101.label Connecting and filling vertices in path at fillseed 11620 Finding path..................................................................................................................................................................................................................................................................................................................................................... done Filling 11620 nlabel 10824 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.006201.label Connecting and filling vertices in path at fillseed 11145 Finding path........................................................................................................................................................................................................................................................................................................................... done Filling 11145 nlabel 10891 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.006301.label Connecting and filling vertices in path at fillseed 12296 Finding path................................................................................................................................................................................................................................................................................................................... done Filling 12296 nlabel 9097 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.006401.label Connecting and filling vertices in path at fillseed 12268 Finding path.............................................................................................................................................................................................................................................................................................. done Filling 12268 nlabel 7729 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.006501.label Connecting and filling vertices in path at fillseed 11381 Finding path................................................................................................................................................................................................................................................................................................. done Filling 11381 nlabel 7910 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.006601.label Connecting and filling vertices in path at fillseed 9903 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 9903 nlabel 8184 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.006701.label Connecting and filling vertices in path at fillseed 12301 Finding path............................................................................................................................................................................................................................................................................................ done Filling 12301 nlabel 7868 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.006801.label Connecting and filling vertices in path at fillseed 13398 Finding path................................................................................................................................................................................................................................................................................................................................ done Filling 13398 nlabel 9300 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.006901.label Connecting and filling vertices in path at fillseed 11949 Finding path................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 11949 nlabel 10903 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.007001.label Connecting and filling vertices in path at fillseed 9976 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 9976 nlabel 8732 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.007101.label Connecting and filling vertices in path at fillseed 12237 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 12237 nlabel 8245 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.007201.label Connecting and filling vertices in path at fillseed 12610 Finding path............................................................................................................................................................................................................................................................................................................................................................................. done Filling 12610 nlabel 9917 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.007301.label Connecting and filling vertices in path at fillseed 11530 Finding path............................................................................................................................................................................................................................................................................................................................................................................ done Filling 11530 nlabel 11476 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.007401.label Connecting and filling vertices in path at fillseed 14078 Finding path........................................................................................................................................................................................................................................................................... done Filling 14078 nlabel 9785 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.007501.label Connecting and filling vertices in path at fillseed 16053 Finding path........................................................................................................................................................................................................................................................................................................................ done Filling 16053 nlabel 8958 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.007601.label Connecting and filling vertices in path at fillseed 12866 Finding path................................................................................................................................................................................................................................................................................................................................................ done Filling 12866 nlabel 10653 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.007701.label Connecting and filling vertices in path at fillseed 16782 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 16782 nlabel 9770 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.007801.label Connecting and filling vertices in path at fillseed 14079 Finding path................................................................................................................................................................................................................................................................................................................................ done Filling 14079 nlabel 9766 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.007901.label Connecting and filling vertices in path at fillseed 15199 Finding path.................................................................................................................................................................................................................................................................................................................................................. done Filling 15199 nlabel 8847 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.008001.label Connecting and filling vertices in path at fillseed 15626 Finding path.............................................................................................................................................................................................................................................................................................................................................................. done Filling 15626 nlabel 12082 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.008101.label Connecting and filling vertices in path at fillseed 14860 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 14860 nlabel 8250 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.008201.label Connecting and filling vertices in path at fillseed 16817 Finding path............................................................................................................................................................................................................................................................................................................................................ done Filling 16817 nlabel 7025 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.008301.label Connecting and filling vertices in path at fillseed 18487 Finding path............................................................................................................................................................................................................................................................................................................................................ done Filling 18487 nlabel 8418 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.008401.label Connecting and filling vertices in path at fillseed 13858 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 13858 nlabel 9568 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.008501.label Connecting and filling vertices in path at fillseed 17682 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 17682 nlabel 8089 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.008601.label Connecting and filling vertices in path at fillseed 15864 Finding path............................................................................................................................................................................................................................................................................................................................................. done Filling 15864 nlabel 7921 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.008701.label Connecting and filling vertices in path at fillseed 18427 Finding path.................................................................................................................................................................................................................................................................................................................................................................... done Filling 18427 nlabel 8012 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.008801.label Connecting and filling vertices in path at fillseed 16141 Finding path......................................................................................................................................................................................................................................................................................................................................... done Filling 16141 nlabel 10780 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.008901.label Connecting and filling vertices in path at fillseed 14845 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 14845 nlabel 8674 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.009001.label Connecting and filling vertices in path at fillseed 15867 Finding path............................................................................................................................................................................................................................................................................................................................................................ done Filling 15867 nlabel 8338 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.009101.label Connecting and filling vertices in path at fillseed 20260 Finding path...................................................................................................................................................................................................................................................................................... done Filling 20260 nlabel 6592 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.009201.label Connecting and filling vertices in path at fillseed 13903 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 13903 nlabel 11878 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.009301.label Connecting and filling vertices in path at fillseed 20324 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 20324 nlabel 7243 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.009401.label Connecting and filling vertices in path at fillseed 18765 Finding path...................................................................................................................................................................................................................................................................................................................... done Filling 18765 nlabel 7389 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.009501.label Connecting and filling vertices in path at fillseed 21067 Finding path............................................................................................................................................................................................................................................................................................................ done Filling 21067 nlabel 7426 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.009601.label Connecting and filling vertices in path at fillseed 18609 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 18609 nlabel 7285 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.009701.label Connecting and filling vertices in path at fillseed 20327 Finding path..................................................................................................................................................................................................................................................................................................................................................... done Filling 20327 nlabel 8335 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.009801.label Connecting and filling vertices in path at fillseed 18743 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 18743 nlabel 7605 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.009901.label Connecting and filling vertices in path at fillseed 21846 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 21846 nlabel 8307 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.010001.label Connecting and filling vertices in path at fillseed 20279 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 20279 nlabel 6966 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.010101.label Connecting and filling vertices in path at fillseed 22214 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 22214 nlabel 7851 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.010201.label Connecting and filling vertices in path at fillseed 21493 Finding path............................................................................................................................................................................................................................................................ done Filling 21493 nlabel 7145 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.010301.label Connecting and filling vertices in path at fillseed 22104 Finding path............................................................................................................................................................................................................................................................................................... done Filling 22104 nlabel 8348 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.010401.label Connecting and filling vertices in path at fillseed 22185 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 22185 nlabel 7957 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.010501.label Connecting and filling vertices in path at fillseed 20251 Finding path.......................................................................................................................................................................................................................................................................................................................................................................... done Filling 20251 nlabel 9551 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.010601.label Connecting and filling vertices in path at fillseed 23167 Finding path............................................................................................................................................................................................................................................................................................................. done Filling 23167 nlabel 7613 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.010701.label Connecting and filling vertices in path at fillseed 23142 Finding path................................................................................................................................................................................................................................................................................................ done Filling 23142 nlabel 7528 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.010801.label Connecting and filling vertices in path at fillseed 21289 Finding path....................................................................................................................................................................................................................................................................................................................... done Filling 21289 nlabel 7007 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.010901.label Connecting and filling vertices in path at fillseed 20262 Finding path........................................................................................................................................................................................................................................................................................................... done Filling 20262 nlabel 9165 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.011001.label Connecting and filling vertices in path at fillseed 20499 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 20499 nlabel 7615 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.011101.label Connecting and filling vertices in path at fillseed 25333 Finding path..................................................................................................................................................................................................................................................................................... done Filling 25333 nlabel 7546 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.011201.label Connecting and filling vertices in path at fillseed 20107 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 20107 nlabel 11132 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.011301.label Connecting and filling vertices in path at fillseed 24290 Finding path................................................................................................................................................................................................................................................................................................................................................................................ done Filling 24290 nlabel 9449 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.011401.label Connecting and filling vertices in path at fillseed 24288 Finding path......................................................................................................................................................................................................................................................................................................................................... done Filling 24288 nlabel 7635 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.011501.label Connecting and filling vertices in path at fillseed 23613 Finding path.................................................................................................................................................................................................................................................................................................................................................................. done Filling 23613 nlabel 10720 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.011601.label Connecting and filling vertices in path at fillseed 21010 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 21010 nlabel 11457 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.011701.label Connecting and filling vertices in path at fillseed 23224 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 23224 nlabel 9398 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.011801.label Connecting and filling vertices in path at fillseed 21470 Finding path........................................................................................................................................................................................................................................................................................... done Filling 21470 nlabel 6505 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.011901.label Connecting and filling vertices in path at fillseed 21765 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 21765 nlabel 8188 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.012001.label Connecting and filling vertices in path at fillseed 22019 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 22019 nlabel 8347 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.012101.label Connecting and filling vertices in path at fillseed 23283 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 23283 nlabel 9392 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.012201.label Connecting and filling vertices in path at fillseed 29236 Finding path............................................................................................................................................................................................................................................................................................................................................................ done Filling 29236 nlabel 8953 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.012301.label Connecting and filling vertices in path at fillseed 24488 Finding path.......................................................................................................................................................................................................................................................................................................................... done Filling 24488 nlabel 7203 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.012401.label Connecting and filling vertices in path at fillseed 23041 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 23041 nlabel 8580 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.012501.label Connecting and filling vertices in path at fillseed 23264 Finding path.............................................................................................................................................................................................................................................................................................................................................................................. done Filling 23264 nlabel 9549 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.012601.label Connecting and filling vertices in path at fillseed 30265 Finding path....................................................................................................................................................................................................................................................................................................................................................... done Filling 30265 nlabel 9241 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.012701.label Connecting and filling vertices in path at fillseed 23832 Finding path................................................................................................................................................................................................................................................................................................................................................. done Filling 23832 nlabel 10310 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.012801.label Connecting and filling vertices in path at fillseed 24160 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 24160 nlabel 8084 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.012901.label Connecting and filling vertices in path at fillseed 28742 Finding path............................................................................................................................................................................................................................................................................................................................................................................. done Filling 28742 nlabel 9044 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.013001.label Connecting and filling vertices in path at fillseed 33582 Finding path................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 33582 nlabel 8267 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.013101.label Connecting and filling vertices in path at fillseed 24600 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 24600 nlabel 11396 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.013201.label Connecting and filling vertices in path at fillseed 23020 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 23020 nlabel 11061 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.013301.label Connecting and filling vertices in path at fillseed 28579 Finding path...................................................................................................................................................................................................................................................................................................... done Filling 28579 nlabel 9036 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.013401.label Connecting and filling vertices in path at fillseed 29610 Finding path........................................................................................................................................................................................................................................................................................... done Filling 29610 nlabel 6501 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.013501.label Connecting and filling vertices in path at fillseed 27216 Finding path............................................................................................................................................................................................................................................................................................................ done Filling 27216 nlabel 7893 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.013601.label Connecting and filling vertices in path at fillseed 27306 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 27306 nlabel 10422 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.013701.label Connecting and filling vertices in path at fillseed 30667 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 30667 nlabel 9367 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.013801.label Connecting and filling vertices in path at fillseed 30725 Finding path......................................................................................................................................................................................................... done Filling 30725 nlabel 6096 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.013901.label Connecting and filling vertices in path at fillseed 33563 Finding path.......................................................................................................................................................................................................................................................................................................................................................... done Filling 33563 nlabel 8723 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.014001.label Connecting and filling vertices in path at fillseed 33424 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 33424 nlabel 10271 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.014101.label Connecting and filling vertices in path at fillseed 26382 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 26382 nlabel 8849 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.014201.label Connecting and filling vertices in path at fillseed 29733 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 29733 nlabel 8255 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.014301.label Connecting and filling vertices in path at fillseed 29604 Finding path...................................................................................................................................................................................................................................................................................................... done Filling 29604 nlabel 7506 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.014401.label Connecting and filling vertices in path at fillseed 29720 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 29720 nlabel 6784 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.014501.label Connecting and filling vertices in path at fillseed 29418 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 29418 nlabel 10728 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.014601.label Connecting and filling vertices in path at fillseed 31833 Finding path............................................................................................................................................................................................................................................................................................................. done Filling 31833 nlabel 9135 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.014701.label Connecting and filling vertices in path at fillseed 31842 Finding path........................................................................................................................................................................................................................................................................ done Filling 31842 nlabel 7494 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.014801.label Connecting and filling vertices in path at fillseed 33831 Finding path.............................................................................................................................................................................................................................................................................................................................................. done Filling 33831 nlabel 8528 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.014901.label Connecting and filling vertices in path at fillseed 29677 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 29677 nlabel 7188 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.015001.label Connecting and filling vertices in path at fillseed 34134 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 34134 nlabel 8220 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.015101.label Connecting and filling vertices in path at fillseed 32895 Finding path.................................................................................................................................................................................................................................................... done Filling 32895 nlabel 6678 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.015201.label Connecting and filling vertices in path at fillseed 31486 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 31486 nlabel 9685 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.015301.label Connecting and filling vertices in path at fillseed 28293 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 28293 nlabel 11087 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.015401.label Connecting and filling vertices in path at fillseed 34084 Finding path................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 34084 nlabel 8182 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.015501.label Connecting and filling vertices in path at fillseed 34056 Finding path.............................................................................................................................................................................................................................. done Filling 34056 nlabel 6558 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.015601.label Connecting and filling vertices in path at fillseed 33996 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 33996 nlabel 8036 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.015701.label Connecting and filling vertices in path at fillseed 35431 Finding path............................................................................................................................................................................................................................................................................................................................................................ done Filling 35431 nlabel 8174 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.015801.label Connecting and filling vertices in path at fillseed 33812 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 33812 nlabel 12553 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.015901.label Connecting and filling vertices in path at fillseed 33022 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 33022 nlabel 8504 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.016001.label Connecting and filling vertices in path at fillseed 38004 Finding path........................................................................................................................................................................................................................................................................................................................................................... done Filling 38004 nlabel 9314 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.016101.label Connecting and filling vertices in path at fillseed 33689 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 33689 nlabel 8875 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.016201.label Connecting and filling vertices in path at fillseed 37256 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 37256 nlabel 13039 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.016301.label Connecting and filling vertices in path at fillseed 34102 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................. done Filling 34102 nlabel 9082 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.016401.label Connecting and filling vertices in path at fillseed 34287 Finding path................................................................................................................................................................................................................................................................................. done Filling 34287 nlabel 8373 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.016501.label Connecting and filling vertices in path at fillseed 36101 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 36101 nlabel 9005 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.016601.label Connecting and filling vertices in path at fillseed 32998 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 32998 nlabel 6578 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.016701.label Connecting and filling vertices in path at fillseed 35232 Finding path................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 35232 nlabel 8138 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.016801.label Connecting and filling vertices in path at fillseed 35415 Finding path.......................................................................................................................................................................................................................................................................................................... done Filling 35415 nlabel 8296 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.016901.label Connecting and filling vertices in path at fillseed 34835 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 34835 nlabel 8275 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.017001.label Connecting and filling vertices in path at fillseed 34106 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 34106 nlabel 6498 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.017101.label Connecting and filling vertices in path at fillseed 40173 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 40173 nlabel 9697 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.017201.label Connecting and filling vertices in path at fillseed 40458 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 40458 nlabel 8144 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.017301.label Connecting and filling vertices in path at fillseed 35914 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 35914 nlabel 8856 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.017401.label Connecting and filling vertices in path at fillseed 39850 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 39850 nlabel 10819 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.017501.label Connecting and filling vertices in path at fillseed 38858 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 38858 nlabel 10013 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.017601.label Connecting and filling vertices in path at fillseed 37650 Finding path.............................................................................................................................................................................................................................. done Filling 37650 nlabel 6462 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.017701.label Connecting and filling vertices in path at fillseed 41647 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 41647 nlabel 8288 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.017801.label Connecting and filling vertices in path at fillseed 35930 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 35930 nlabel 8578 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.017901.label Connecting and filling vertices in path at fillseed 41448 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 41448 nlabel 5718 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.018001.label Connecting and filling vertices in path at fillseed 40132 Finding path............................................................................................................................................................................................................................................................................................................................................................................ done Filling 40132 nlabel 10370 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.018101.label Connecting and filling vertices in path at fillseed 43709 Finding path............................................................................................................................................................................................................ done Filling 43709 nlabel 6989 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.018201.label Connecting and filling vertices in path at fillseed 44739 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 44739 nlabel 7675 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.018301.label Connecting and filling vertices in path at fillseed 42677 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 42677 nlabel 7846 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.018401.label Connecting and filling vertices in path at fillseed 42392 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 42392 nlabel 9919 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.018501.label Connecting and filling vertices in path at fillseed 36443 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 36443 nlabel 8907 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.018601.label Connecting and filling vertices in path at fillseed 42820 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 42820 nlabel 8813 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.018701.label Connecting and filling vertices in path at fillseed 37475 Finding path............................................................................................................................................................................................................................................................................................................................. done Filling 37475 nlabel 7156 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.018801.label Connecting and filling vertices in path at fillseed 43815 Finding path.................................................................................................................................................................................................................................................................................................... done Filling 43815 nlabel 6398 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.018901.label Connecting and filling vertices in path at fillseed 41318 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 41318 nlabel 10539 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.019001.label Connecting and filling vertices in path at fillseed 44866 Finding path....................................................................................................................................................................................................................................................................................................................................... done Filling 44866 nlabel 9677 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.019101.label Connecting and filling vertices in path at fillseed 40328 Finding path.............................................................................................................................................................................................................................................................................................................................................. done Filling 40328 nlabel 7665 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.019201.label Connecting and filling vertices in path at fillseed 35960 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 35960 nlabel 8996 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.019301.label Connecting and filling vertices in path at fillseed 45073 Finding path........................................................................................................................................................................................................................................................................................................................................................................................ done Filling 45073 nlabel 9632 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.019401.label Connecting and filling vertices in path at fillseed 48295 Finding path......................................................................................................................................................................................................................................................................................................................................................... done Filling 48295 nlabel 9708 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.019501.label Connecting and filling vertices in path at fillseed 44850 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 44850 nlabel 9733 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.019601.label Connecting and filling vertices in path at fillseed 43996 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 43996 nlabel 9326 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.019701.label Connecting and filling vertices in path at fillseed 44450 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 44450 nlabel 7730 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.019801.label Connecting and filling vertices in path at fillseed 43323 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 43323 nlabel 11157 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.019901.label Connecting and filling vertices in path at fillseed 43681 Finding path................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 43681 nlabel 9225 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.020001.label Connecting and filling vertices in path at fillseed 44819 Finding path........................................................................................................................................................................................................... done Filling 44819 nlabel 5640 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.020101.label Connecting and filling vertices in path at fillseed 45889 Finding path....................................................................................................................................................................................................................................................................................................................... done Filling 45889 nlabel 6606 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.020201.label Connecting and filling vertices in path at fillseed 45157 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 45157 nlabel 9179 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.020301.label Connecting and filling vertices in path at fillseed 47266 Finding path.................................................................................................................................................................................................................................. done Filling 47266 nlabel 4938 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.020401.label Connecting and filling vertices in path at fillseed 47280 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 47280 nlabel 8988 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.020501.label Connecting and filling vertices in path at fillseed 47225 Finding path..................................................................................................................................................................................................................................................................... done Filling 47225 nlabel 6941 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.020601.label Connecting and filling vertices in path at fillseed 45550 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 45550 nlabel 8717 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.020701.label Connecting and filling vertices in path at fillseed 44411 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 44411 nlabel 11281 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.020801.label Connecting and filling vertices in path at fillseed 44743 Finding path.................................................................................................................................................................................................................................................................................................................................................. done Filling 44743 nlabel 9778 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.020901.label Connecting and filling vertices in path at fillseed 47246 Finding path....................................................................................................................................................................................................................................................... done Filling 47246 nlabel 7136 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.021001.label Connecting and filling vertices in path at fillseed 49147 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 49147 nlabel 8729 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.021101.label Connecting and filling vertices in path at fillseed 46246 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 46246 nlabel 9492 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.021201.label Connecting and filling vertices in path at fillseed 53823 Finding path................................................................................................................................................................................................................................................................................................................................................................ done Filling 53823 nlabel 9955 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.021301.label Connecting and filling vertices in path at fillseed 49893 Finding path..................................................................................................................................................................................................................................................................................... done Filling 49893 nlabel 8887 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.021401.label Connecting and filling vertices in path at fillseed 47133 Finding path...................................................................................................................................................................................................................................................................................................................................................................................... done Filling 47133 nlabel 6530 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.021501.label Connecting and filling vertices in path at fillseed 47413 Finding path........................................................................................................................................................................................................................................................................................................................... done Filling 47413 nlabel 8044 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.021601.label Connecting and filling vertices in path at fillseed 51174 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 51174 nlabel 7139 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.021701.label Connecting and filling vertices in path at fillseed 57767 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 57767 nlabel 6202 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.021801.label Connecting and filling vertices in path at fillseed 48466 Finding path............................................................................................................................................................................................................................................................................................................ done Filling 48466 nlabel 7302 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.021901.label Connecting and filling vertices in path at fillseed 48044 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 48044 nlabel 10917 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.022001.label Connecting and filling vertices in path at fillseed 45476 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 45476 nlabel 10543 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.022101.label Connecting and filling vertices in path at fillseed 56523 Finding path....................................................................................................................................................................................................................................................................................................................................... done Filling 56523 nlabel 9625 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.022201.label Connecting and filling vertices in path at fillseed 49760 Finding path...................................................................................................................................................... done Filling 49760 nlabel 6537 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.022301.label Connecting and filling vertices in path at fillseed 55078 Finding path.......................................................................................................................................................................................................................................................... done Filling 55078 nlabel 7227 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.022401.label Connecting and filling vertices in path at fillseed 51759 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 51759 nlabel 9855 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.022501.label Connecting and filling vertices in path at fillseed 50973 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 50973 nlabel 8786 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.022601.label Connecting and filling vertices in path at fillseed 57787 Finding path....................................................................................................................................................................................... done Filling 57787 nlabel 5744 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.022701.label Connecting and filling vertices in path at fillseed 48440 Finding path....................................................................................................................................................................................................................................................................................................................................................................... done Filling 48440 nlabel 7069 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.022801.label Connecting and filling vertices in path at fillseed 53167 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 53167 nlabel 10109 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.022901.label Connecting and filling vertices in path at fillseed 53458 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 53458 nlabel 8293 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.023001.label Connecting and filling vertices in path at fillseed 58966 Finding path........................................................................................................................................................................................................................................................................................................................................................................ done Filling 58966 nlabel 8329 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.023101.label Connecting and filling vertices in path at fillseed 48483 Finding path................................................................................................................................................................... done Filling 48483 nlabel 6469 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.023201.label Connecting and filling vertices in path at fillseed 54615 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 54615 nlabel 8495 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.023301.label Connecting and filling vertices in path at fillseed 52717 Finding path.................................................................................................................................................................................................................................................................................... done Filling 52717 nlabel 8385 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.023401.label Connecting and filling vertices in path at fillseed 53708 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 53708 nlabel 8575 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.023501.label Connecting and filling vertices in path at fillseed 51199 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 51199 nlabel 8174 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.023601.label Connecting and filling vertices in path at fillseed 51544 Finding path....................................................................................................................................................................................................................................................................................................................................... done Filling 51544 nlabel 9058 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.023701.label Connecting and filling vertices in path at fillseed 49416 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 49416 nlabel 8732 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.023801.label Connecting and filling vertices in path at fillseed 49843 Finding path.................................................................................................................................................................................................................................................................................................... done Filling 49843 nlabel 6785 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.023901.label Connecting and filling vertices in path at fillseed 55266 Finding path............................................................................................................................................................................................................................................................................................................. done Filling 55266 nlabel 6343 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.024001.label Connecting and filling vertices in path at fillseed 60449 Finding path.................................................................................................................................................................... done Filling 60449 nlabel 5686 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.024101.label Connecting and filling vertices in path at fillseed 52958 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 52958 nlabel 8189 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.024201.label Connecting and filling vertices in path at fillseed 57177 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 57177 nlabel 8687 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.024301.label Connecting and filling vertices in path at fillseed 59043 Finding path............................................................................................................................................................................................................................................. done Filling 59043 nlabel 6543 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.024401.label Connecting and filling vertices in path at fillseed 58912 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 58912 nlabel 8561 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.024501.label Connecting and filling vertices in path at fillseed 52568 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 52568 nlabel 10181 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.024601.label Connecting and filling vertices in path at fillseed 52925 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 52925 nlabel 8310 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.024701.label Connecting and filling vertices in path at fillseed 57180 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 57180 nlabel 7036 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.024801.label Connecting and filling vertices in path at fillseed 60508 Finding path.......................................................................................................................................................................................................................................................................... done Filling 60508 nlabel 6394 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.024901.label Connecting and filling vertices in path at fillseed 56610 Finding path.................................................................................................................................................................................................................................................................................................... done Filling 56610 nlabel 7132 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.025001.label Connecting and filling vertices in path at fillseed 61993 Finding path.................................................................................................................................................................. done Filling 61993 nlabel 6330 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.025101.label Connecting and filling vertices in path at fillseed 60385 Finding path.............................................................................................................................................................................................................................................................................................. done Filling 60385 nlabel 7173 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.025201.label Connecting and filling vertices in path at fillseed 59534 Finding path........................................................................................................................................................................................................................................................................................................................................................ done Filling 59534 nlabel 7329 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.025301.label Connecting and filling vertices in path at fillseed 58568 Finding path.................................................................................................................................................................................................................................................................................................................................................................................... done Filling 58568 nlabel 9181 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.025401.label Connecting and filling vertices in path at fillseed 59005 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 59005 nlabel 6352 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.025501.label Connecting and filling vertices in path at fillseed 63490 Finding path......................................................................................................................................................... done Filling 63490 nlabel 6584 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.025601.label Connecting and filling vertices in path at fillseed 57487 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 57487 nlabel 11569 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.025701.label Connecting and filling vertices in path at fillseed 58255 Finding path......................................................................................................................................................................................................................................................................................................................................................... done Filling 58255 nlabel 6711 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.025801.label Connecting and filling vertices in path at fillseed 63059 Finding path............................................................................................................................................................................................................................................................................................................................................................................ done Filling 63059 nlabel 8173 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.025901.label Connecting and filling vertices in path at fillseed 61527 Finding path........................................................................................................................................................................................................................................................................................................................................................................................... done Filling 61527 nlabel 7674 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.026001.label Connecting and filling vertices in path at fillseed 61762 Finding path....................................................................................................................................................................................................................................................................................... done Filling 61762 nlabel 7855 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.026101.label Connecting and filling vertices in path at fillseed 64859 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 64859 nlabel 7692 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.026201.label Connecting and filling vertices in path at fillseed 62005 Finding path................................................................................................................................ done Filling 62005 nlabel 5967 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.026301.label Connecting and filling vertices in path at fillseed 137741 Finding path............................................................................................................................................................................................................................................................................................................................. done Filling 137741 nlabel 7269 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.026401.label Connecting and filling vertices in path at fillseed 59509 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 59509 nlabel 6939 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.026501.label Connecting and filling vertices in path at fillseed 61100 Finding path............................................................................................................................................................................................................................. done Filling 61100 nlabel 6218 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.026601.label Connecting and filling vertices in path at fillseed 62036 Finding path............................................................................................................................................................................................................................................................. done Filling 62036 nlabel 7375 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.026701.label Connecting and filling vertices in path at fillseed 70496 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 70496 nlabel 6414 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.026801.label Connecting and filling vertices in path at fillseed 67720 Finding path.......................................................................................................................................... done Filling 67720 nlabel 6090 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.026901.label Connecting and filling vertices in path at fillseed 66285 Finding path................................................................................................................................ done Filling 66285 nlabel 5632 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.027001.label Connecting and filling vertices in path at fillseed 57468 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 57468 nlabel 11197 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.027101.label Connecting and filling vertices in path at fillseed 64492 Finding path............................................................................................................................................................................................................................... done Filling 64492 nlabel 7274 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.027201.label Connecting and filling vertices in path at fillseed 64658 Finding path...................................................................................................................................................................................................................................................................................................................................... done Filling 64658 nlabel 7104 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.027301.label Connecting and filling vertices in path at fillseed 63521 Finding path........................................................................................................................................................................................................................................................................................... done Filling 63521 nlabel 6636 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.027401.label Connecting and filling vertices in path at fillseed 70507 Finding path.................................................................................................................... done Filling 70507 nlabel 5879 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.027501.label Connecting and filling vertices in path at fillseed 60653 Finding path............................................................................................................................................................................................................................................................................................................................................................................................... done Filling 60653 nlabel 10506 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.027601.label Connecting and filling vertices in path at fillseed 60977 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 60977 nlabel 8045 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.027701.label Connecting and filling vertices in path at fillseed 65903 Finding path.................................................................................................................................................................................................................................................................. done Filling 65903 nlabel 7142 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.027801.label Connecting and filling vertices in path at fillseed 58031 Finding path.............................................................................................................................................................................................................. done Filling 58031 nlabel 6953 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.027901.label Connecting and filling vertices in path at fillseed 63533 Finding path................................................................................................................................................................................................................................................................................................................................................................ done Filling 63533 nlabel 7503 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.028001.label Connecting and filling vertices in path at fillseed 59120 Finding path............................................................................................................................................................................................................................................................................................................................................................................. done Filling 59120 nlabel 11115 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.028101.label Connecting and filling vertices in path at fillseed 66642 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 66642 nlabel 9187 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.028201.label Connecting and filling vertices in path at fillseed 67101 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 67101 nlabel 13105 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.028301.label Connecting and filling vertices in path at fillseed 67486 Finding path....................................................................................................................................................................................................................................................................................... done Filling 67486 nlabel 6944 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.028401.label Connecting and filling vertices in path at fillseed 69069 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 69069 nlabel 5217 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.028501.label Connecting and filling vertices in path at fillseed 75221 Finding path......................................................................................................................................... done Filling 75221 nlabel 4854 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.028601.label Connecting and filling vertices in path at fillseed 60621 Finding path........................................................................................................................................................................................................................................................................................................................................................................... done Filling 60621 nlabel 10862 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.028701.label Connecting and filling vertices in path at fillseed 62532 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 62532 nlabel 8351 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.028801.label Connecting and filling vertices in path at fillseed 65656 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 65656 nlabel 12847 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.028901.label Connecting and filling vertices in path at fillseed 67841 Finding path.................................................................................................................................................................................................................................................................................................................... done Filling 67841 nlabel 7712 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.029001.label Connecting and filling vertices in path at fillseed 66299 Finding path...................................................................................................................................................................................................................................................................................................................... done Filling 66299 nlabel 7354 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.029101.label Connecting and filling vertices in path at fillseed 73637 Finding path.................................................................................................................................. done Filling 73637 nlabel 4398 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.029201.label Connecting and filling vertices in path at fillseed 75093 Finding path........................................................................................................................................................................................................................................................ done Filling 75093 nlabel 5039 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.029301.label Connecting and filling vertices in path at fillseed 71240 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 71240 nlabel 7624 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.029401.label Connecting and filling vertices in path at fillseed 71125 Finding path.......................................................................................................................................................................................................................................... done Filling 71125 nlabel 7111 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.029501.label Connecting and filling vertices in path at fillseed 68931 Finding path........................................................................................................................................................................................................................................................................................................................... done Filling 68931 nlabel 7412 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.029601.label Connecting and filling vertices in path at fillseed 69173 Finding path........................................................................................................................................................................................................................................................................................................................................................................................ done Filling 69173 nlabel 7644 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.029701.label Connecting and filling vertices in path at fillseed 69132 Finding path................................................................................................................... done Filling 69132 nlabel 4273 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.029801.label Connecting and filling vertices in path at fillseed 72693 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 72693 nlabel 7968 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.029901.label Connecting and filling vertices in path at fillseed 71440 Finding path.................................................................................................................................................................................................................. done Filling 71440 nlabel 6267 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.030001.label Connecting and filling vertices in path at fillseed 70310 Finding path....................................................................................................................................................................................................................................................................................................... done Filling 70310 nlabel 6909 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.030101.label Connecting and filling vertices in path at fillseed 79813 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 79813 nlabel 4482 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.030201.label Connecting and filling vertices in path at fillseed 73756 Finding path......................................................................................................................................................................................................................................................................................................................................................................... done Filling 73756 nlabel 10934 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.030301.label Connecting and filling vertices in path at fillseed 74179 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 74179 nlabel 8394 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.030401.label Connecting and filling vertices in path at fillseed 71545 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 71545 nlabel 13080 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.030501.label Connecting and filling vertices in path at fillseed 73997 Finding path..................................................................................................................................................................... done Filling 73997 nlabel 7173 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.030601.label Connecting and filling vertices in path at fillseed 71958 Finding path......................................................................................................................................................................................................................................................................................................................................................................................... done Filling 71958 nlabel 5640 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.030701.label Connecting and filling vertices in path at fillseed 75267 Finding path............................................................................................................................... done Filling 75267 nlabel 4272 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.030801.label Connecting and filling vertices in path at fillseed 64719 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 64719 nlabel 9205 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.030901.label Connecting and filling vertices in path at fillseed 73109 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 73109 nlabel 12375 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.031001.label Connecting and filling vertices in path at fillseed 72629 Finding path.................................................................................................................................................................................................................... done Filling 72629 nlabel 6999 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.031101.label Connecting and filling vertices in path at fillseed 72066 Finding path........................................................................................................................................................................................................................................................................................................................................... done Filling 72066 nlabel 7652 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.031201.label Connecting and filling vertices in path at fillseed 73736 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 73736 nlabel 9651 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.031301.label Connecting and filling vertices in path at fillseed 75795 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 75795 nlabel 9615 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.031401.label Connecting and filling vertices in path at fillseed 71522 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 71522 nlabel 12785 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.031501.label Connecting and filling vertices in path at fillseed 72330 Finding path..................................................................................................................................................................................................................................... done Filling 72330 nlabel 7320 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.031601.label Connecting and filling vertices in path at fillseed 73554 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 73554 nlabel 5206 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.031701.label Connecting and filling vertices in path at fillseed 75367 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 75367 nlabel 9430 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.031801.label Connecting and filling vertices in path at fillseed 78066 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 78066 nlabel 10305 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.031901.label Connecting and filling vertices in path at fillseed 76111 Finding path................................................................................................................................................................................................... done Filling 76111 nlabel 6683 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.032001.label Connecting and filling vertices in path at fillseed 73779 Finding path.................................................................................................................................................................................................. done Filling 73779 nlabel 7079 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.032101.label Connecting and filling vertices in path at fillseed 82494 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 82494 nlabel 5403 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.032201.label Connecting and filling vertices in path at fillseed 77002 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 77002 nlabel 9573 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.032301.label Connecting and filling vertices in path at fillseed 69911 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 69911 nlabel 13210 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.032401.label Connecting and filling vertices in path at fillseed 77639 Finding path.................................................................................................................................. done Filling 77639 nlabel 4178 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.032501.label Connecting and filling vertices in path at fillseed 76886 Finding path........................................................................................................................................................................................................................................................................................................................ done Filling 76886 nlabel 6482 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.032601.label Connecting and filling vertices in path at fillseed 82512 Finding path......................................................................................................................................................................................................................................................................................................................................................................... done Filling 82512 nlabel 4220 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.032701.label Connecting and filling vertices in path at fillseed 75619 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 75619 nlabel 9430 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.032801.label Connecting and filling vertices in path at fillseed 78027 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 78027 nlabel 10933 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.032901.label Connecting and filling vertices in path at fillseed 80888 Finding path............................................................................................................................................................................................................................................................................................................................ done Filling 80888 nlabel 7209 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.033001.label Connecting and filling vertices in path at fillseed 73483 Finding path............................................................................................................................................................................................................................................................................................................................................................ done Filling 73483 nlabel 8179 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.033101.label Connecting and filling vertices in path at fillseed 81225 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 81225 nlabel 3702 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.033201.label Connecting and filling vertices in path at fillseed 77181 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 77181 nlabel 9914 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.033301.label Connecting and filling vertices in path at fillseed 77967 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 77967 nlabel 11139 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.033401.label Connecting and filling vertices in path at fillseed 77353 Finding path................................................................................................................................................................................................................... done Filling 77353 nlabel 6863 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.033501.label Connecting and filling vertices in path at fillseed 79850 Finding path.................................................................................................................................................................................................................................................................................................... done Filling 79850 nlabel 7564 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.033601.label Connecting and filling vertices in path at fillseed 78404 Finding path...................................................................................................................................................................................................................................................................................................................................... done Filling 78404 nlabel 8093 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.033701.label Connecting and filling vertices in path at fillseed 81177 Finding path........................................................................................................ done Filling 81177 nlabel 4420 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.033801.label Connecting and filling vertices in path at fillseed 78872 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 78872 nlabel 8900 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.033901.label Connecting and filling vertices in path at fillseed 81739 Finding path................................................................................................................................................................................................ done Filling 81739 nlabel 7528 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.034001.label Connecting and filling vertices in path at fillseed 79859 Finding path......................................................................................................................................................................................................................................................................................................... done Filling 79859 nlabel 7049 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.034101.label Connecting and filling vertices in path at fillseed 76854 Finding path........................................................................................................................................................................................................................................................................................ done Filling 76854 nlabel 7152 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.034201.label Connecting and filling vertices in path at fillseed 82453 Finding path..................................................................................................... done Filling 82453 nlabel 4261 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.034301.label Connecting and filling vertices in path at fillseed 79480 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 79480 nlabel 11862 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.034401.label Connecting and filling vertices in path at fillseed 83306 Finding path......................................................................................................................................................................................................................................................................................... done Filling 83306 nlabel 7361 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.034501.label Connecting and filling vertices in path at fillseed 79859 Finding path.................................................................................................................................................................................................................................................................................................................................................... done Filling 79859 nlabel 8349 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.034601.label Connecting and filling vertices in path at fillseed 79875 Finding path.............................................................................................................................................................................................................................................................................................................................................................. done Filling 79875 nlabel 9458 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.034701.label Connecting and filling vertices in path at fillseed 81128 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 81128 nlabel 5102 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.034801.label Connecting and filling vertices in path at fillseed 80650 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 80650 nlabel 16343 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.034901.label Connecting and filling vertices in path at fillseed 84479 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 84479 nlabel 6602 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.035001.label Connecting and filling vertices in path at fillseed 86292 Finding path............................................................................................................................................................................................................................................................................................................................ done Filling 86292 nlabel 7343 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.035101.label Connecting and filling vertices in path at fillseed 81238 Finding path................................................................................................................................................................................................................................................................................................................ done Filling 81238 nlabel 7420 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.035201.label Connecting and filling vertices in path at fillseed 83861 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 83861 nlabel 11946 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.035301.label Connecting and filling vertices in path at fillseed 79266 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 79266 nlabel 15969 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.035401.label Connecting and filling vertices in path at fillseed 86976 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 86976 nlabel 13118 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.035501.label Connecting and filling vertices in path at fillseed 85952 Finding path..................................................................................................................................................................................................................................................................................................................................................... done Filling 85952 nlabel 8285 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.035601.label Connecting and filling vertices in path at fillseed 86268 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 86268 nlabel 4158 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.035701.label Connecting and filling vertices in path at fillseed 82606 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 82606 nlabel 11878 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.035801.label Connecting and filling vertices in path at fillseed 82257 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 82257 nlabel 14576 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.035901.label Connecting and filling vertices in path at fillseed 88417 Finding path........................................................................................................................................................................ done Filling 88417 nlabel 3886 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.036001.label Connecting and filling vertices in path at fillseed 94040 Finding path...................................................................................................................................................................................................................................................................................................................................................... done Filling 94040 nlabel 8336 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.036101.label Connecting and filling vertices in path at fillseed 90401 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 90401 nlabel 6673 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.036201.label Connecting and filling vertices in path at fillseed 82509 Finding path................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 82509 nlabel 4738 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.036301.label Connecting and filling vertices in path at fillseed 83693 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 83693 nlabel 4768 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.036401.label Connecting and filling vertices in path at fillseed 91382 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 91382 nlabel 15359 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.036501.label Connecting and filling vertices in path at fillseed 90029 Finding path................................................................................................................................................................................................................................................................................................................................................ done Filling 90029 nlabel 4630 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.036601.label Connecting and filling vertices in path at fillseed 87655 Finding path................................................................................................................................................................................... done Filling 87655 nlabel 6901 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.036701.label Connecting and filling vertices in path at fillseed 84964 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 84964 nlabel 4394 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.036801.label Connecting and filling vertices in path at fillseed 87572 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 87572 nlabel 4457 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.036901.label Connecting and filling vertices in path at fillseed 83434 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 83434 nlabel 14032 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.037001.label Connecting and filling vertices in path at fillseed 93987 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 93987 nlabel 6520 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.037101.label Connecting and filling vertices in path at fillseed 95302 Finding path............................................................................................................................................................................................................................................................................................................................................................................................... done Filling 95302 nlabel 6259 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.037201.label Connecting and filling vertices in path at fillseed 84964 Finding path................................................................................................................................................................................................................................................................................................................................................ done Filling 84964 nlabel 4500 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.037301.label Connecting and filling vertices in path at fillseed 86382 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 86382 nlabel 11470 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.037401.label Connecting and filling vertices in path at fillseed 87207 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 87207 nlabel 15636 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.037501.label Connecting and filling vertices in path at fillseed 95300 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 95300 nlabel 6349 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.037601.label Connecting and filling vertices in path at fillseed 90663 Finding path.................................................................................................................................................................................................. done Filling 90663 nlabel 6795 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.037701.label Connecting and filling vertices in path at fillseed 90433 Finding path................................................................................................................................................................................................................................................................................................................................................................................. done Filling 90433 nlabel 4463 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.037801.label Connecting and filling vertices in path at fillseed 87561 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 87561 nlabel 4752 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.037901.label Connecting and filling vertices in path at fillseed 87328 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 87328 nlabel 14615 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.038001.label Connecting and filling vertices in path at fillseed 95299 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 95299 nlabel 5974 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.038101.label Connecting and filling vertices in path at fillseed 90498 Finding path................................................................................................................................................................................................................................................................... done Filling 90498 nlabel 6938 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.038201.label Connecting and filling vertices in path at fillseed 94282 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 94282 nlabel 4584 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.038301.label Connecting and filling vertices in path at fillseed 89199 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 89199 nlabel 11837 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.038401.label Connecting and filling vertices in path at fillseed 90254 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 90254 nlabel 13682 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.038501.label Connecting and filling vertices in path at fillseed 96529 Finding path............................................................................................................................................................................................................................................................................................................................................................................................ done Filling 96529 nlabel 6048 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.038601.label Connecting and filling vertices in path at fillseed 93099 Finding path........................................................................................................................................................................................................................................ done Filling 93099 nlabel 6328 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.038701.label Connecting and filling vertices in path at fillseed 96640 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................. done Filling 96640 nlabel 4369 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.038801.label Connecting and filling vertices in path at fillseed 90593 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 90593 nlabel 11767 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.038901.label Connecting and filling vertices in path at fillseed 87327 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 87327 nlabel 17333 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.039001.label Connecting and filling vertices in path at fillseed 91135 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 91135 nlabel 11858 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.039101.label Connecting and filling vertices in path at fillseed 93138 Finding path....................................................................................................................................................................................................................................................................... done Filling 93138 nlabel 6379 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.039201.label Connecting and filling vertices in path at fillseed 90464 Finding path....................................................................................................................................................................................................................................................................................................................................... done Filling 90464 nlabel 7959 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.039301.label Connecting and filling vertices in path at fillseed 97758 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 97758 nlabel 4169 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.039401.label Connecting and filling vertices in path at fillseed 88744 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 88744 nlabel 14957 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.039501.label Connecting and filling vertices in path at fillseed 94853 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 94853 nlabel 10212 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.039601.label Connecting and filling vertices in path at fillseed 96082 Finding path.................................................................................................................................................................................................... done Filling 96082 nlabel 4931 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.039701.label Connecting and filling vertices in path at fillseed 94227 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 94227 nlabel 5930 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.039801.label Connecting and filling vertices in path at fillseed 91919 Finding path............................................................................................................................................................................................................................................................................................................................................................................... done Filling 91919 nlabel 10788 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.039901.label Connecting and filling vertices in path at fillseed 93383 Finding path........................................................................................................................................................................................................................................................................................................................................................... done Filling 93383 nlabel 8910 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.040001.label Connecting and filling vertices in path at fillseed 97438 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 97438 nlabel 13952 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.040101.label Connecting and filling vertices in path at fillseed 99709 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 99709 nlabel 5430 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.040201.label Connecting and filling vertices in path at fillseed 97839 Finding path............................................................................................................................................................................................................................................................................................................... done Filling 97839 nlabel 6817 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.040301.label Connecting and filling vertices in path at fillseed 96708 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 96708 nlabel 11551 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.040401.label Connecting and filling vertices in path at fillseed 90282 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 90282 nlabel 12169 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.040501.label Connecting and filling vertices in path at fillseed 93412 Finding path................................................................................................................................................................................................................................................................................................................................................................................ done Filling 93412 nlabel 9524 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.040601.label Connecting and filling vertices in path at fillseed 99839 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 99839 nlabel 5337 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.040701.label Connecting and filling vertices in path at fillseed 97255 Finding path................................................................................................................................................................................................ done Filling 97255 nlabel 5277 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.040801.label Connecting and filling vertices in path at fillseed 97826 Finding path......................................................................................................................................................................................................................................................................................................................................................................................... done Filling 97826 nlabel 6656 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.040901.label Connecting and filling vertices in path at fillseed 98849 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 98849 nlabel 4895 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.041001.label Connecting and filling vertices in path at fillseed 96986 Finding path............................................................................................................................................................................................................................................................................................................................................................................................ done Filling 96986 nlabel 9485 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.041101.label Connecting and filling vertices in path at fillseed 101913 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 101913 nlabel 5168 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.041201.label Connecting and filling vertices in path at fillseed 102207 Finding path............................................................................................................................................................................................ done Filling 102207 nlabel 5984 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.041301.label Connecting and filling vertices in path at fillseed 98878 Finding path................................................................................................................................................................................................................................................................................................................................... done Filling 98878 nlabel 8354 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.041401.label Connecting and filling vertices in path at fillseed 98829 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 98829 nlabel 3684 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.041501.label Connecting and filling vertices in path at fillseed 100739 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 100739 nlabel 14176 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.041601.label Connecting and filling vertices in path at fillseed 101879 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 101879 nlabel 4248 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.041701.label Connecting and filling vertices in path at fillseed 99976 Finding path....................................................................................................................................................................................................................................................................................................................... done Filling 99976 nlabel 6432 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.041801.label Connecting and filling vertices in path at fillseed 96641 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 96641 nlabel 5292 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.041901.label Connecting and filling vertices in path at fillseed 98811 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 98811 nlabel 8535 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.042001.label Connecting and filling vertices in path at fillseed 99221 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 99221 nlabel 7736 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.042101.label Connecting and filling vertices in path at fillseed 104074 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 104074 nlabel 5137 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.042201.label Connecting and filling vertices in path at fillseed 103049 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 103049 nlabel 6231 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.042301.label Connecting and filling vertices in path at fillseed 98860 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 98860 nlabel 5343 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.042401.label Connecting and filling vertices in path at fillseed 95712 Finding path................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 95712 nlabel 9813 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.042501.label Connecting and filling vertices in path at fillseed 101791 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 101791 nlabel 14290 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.042601.label Connecting and filling vertices in path at fillseed 104225 Finding path.................................................................................................................................................................................... done Filling 104225 nlabel 5720 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.042701.label Connecting and filling vertices in path at fillseed 95450 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 95450 nlabel 6504 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.042801.label Connecting and filling vertices in path at fillseed 99953 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 99953 nlabel 5920 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.042901.label Connecting and filling vertices in path at fillseed 96873 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 96873 nlabel 10239 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.043001.label Connecting and filling vertices in path at fillseed 102545 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 102545 nlabel 11170 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.043101.label Connecting and filling vertices in path at fillseed 104179 Finding path..................................................................................................................................................................................... done Filling 104179 nlabel 5324 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.043201.label Connecting and filling vertices in path at fillseed 105900 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 105900 nlabel 6873 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.043301.label Connecting and filling vertices in path at fillseed 101055 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 101055 nlabel 5716 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.043401.label Connecting and filling vertices in path at fillseed 99737 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 99737 nlabel 13288 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.043501.label Connecting and filling vertices in path at fillseed 102707 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 102707 nlabel 18061 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.043601.label Connecting and filling vertices in path at fillseed 105262 Finding path................................................................................................................................................................................................. done Filling 105262 nlabel 5165 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.043701.label Connecting and filling vertices in path at fillseed 104062 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 104062 nlabel 6659 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.043801.label Connecting and filling vertices in path at fillseed 101173 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 101173 nlabel 11682 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.043901.label Connecting and filling vertices in path at fillseed 101859 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 101859 nlabel 13397 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.044001.label Connecting and filling vertices in path at fillseed 105786 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 105786 nlabel 5473 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.044101.label Connecting and filling vertices in path at fillseed 104133 Finding path......................................................................................................................................................................................................... done Filling 104133 nlabel 5425 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.044201.label Connecting and filling vertices in path at fillseed 105091 Finding path........................................................................................................................................................................................................................................................................................................................................ done Filling 105091 nlabel 9012 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.044301.label Connecting and filling vertices in path at fillseed 101211 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 101211 nlabel 12320 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.044401.label Connecting and filling vertices in path at fillseed 101962 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 101962 nlabel 12689 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.044501.label Connecting and filling vertices in path at fillseed 104605 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 104605 nlabel 12928 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.044601.label Connecting and filling vertices in path at fillseed 107447 Finding path........................................................................................................ done Filling 107447 nlabel 3785 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.044701.label Connecting and filling vertices in path at fillseed 108572 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 108572 nlabel 6713 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.044801.label Connecting and filling vertices in path at fillseed 102176 Finding path................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 102176 nlabel 9524 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.044901.label Connecting and filling vertices in path at fillseed 102290 Finding path............................................................................................................................................................................................................................................................................................................................................................................................ done Filling 102290 nlabel 11445 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.045001.label Connecting and filling vertices in path at fillseed 103387 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 103387 nlabel 9151 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.045101.label Connecting and filling vertices in path at fillseed 106685 Finding path.............................................................................................................................................................................................................................................................................................................................................................................. done Filling 106685 nlabel 5472 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.045201.label Connecting and filling vertices in path at fillseed 104444 Finding path........................................................................................................................................... done Filling 104444 nlabel 5162 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.045301.label Connecting and filling vertices in path at fillseed 105990 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 105990 nlabel 7484 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.045401.label Connecting and filling vertices in path at fillseed 102202 Finding path................................................................................................................................................................................................................................................................................................................................................. done Filling 102202 nlabel 9853 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.045501.label Connecting and filling vertices in path at fillseed 100989 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 100989 nlabel 9984 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.045601.label Connecting and filling vertices in path at fillseed 106570 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 106570 nlabel 13753 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.045701.label Connecting and filling vertices in path at fillseed 109436 Finding path................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 109436 nlabel 5232 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.045801.label Connecting and filling vertices in path at fillseed 109840 Finding path.................................................................................................................... done Filling 109840 nlabel 4480 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.045901.label Connecting and filling vertices in path at fillseed 105947 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 105947 nlabel 6478 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.046001.label Connecting and filling vertices in path at fillseed 102111 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 102111 nlabel 6659 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.046101.label Connecting and filling vertices in path at fillseed 102074 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 102074 nlabel 10022 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.046201.label Connecting and filling vertices in path at fillseed 105331 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 105331 nlabel 9452 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.046301.label Connecting and filling vertices in path at fillseed 110236 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 110236 nlabel 5089 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.046401.label Connecting and filling vertices in path at fillseed 109080 Finding path............................................................................................................................................... done Filling 109080 nlabel 4516 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.046501.label Connecting and filling vertices in path at fillseed 110221 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 110221 nlabel 6344 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.046601.label Connecting and filling vertices in path at fillseed 109351 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 109351 nlabel 10330 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.046701.label Connecting and filling vertices in path at fillseed 113518 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 113518 nlabel 13173 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.046801.label Connecting and filling vertices in path at fillseed 109765 Finding path..................................................................................................................................................... done Filling 109765 nlabel 4770 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.046901.label Connecting and filling vertices in path at fillseed 113092 Finding path............................................................................................................................................................. done Filling 113092 nlabel 5163 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.047001.label Connecting and filling vertices in path at fillseed 110280 Finding path................................................................................................................................................................................................................................................................................................................................................ done Filling 110280 nlabel 10287 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.047101.label Connecting and filling vertices in path at fillseed 106226 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 106226 nlabel 10739 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.047201.label Connecting and filling vertices in path at fillseed 110740 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 110740 nlabel 15679 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.047301.label Connecting and filling vertices in path at fillseed 111942 Finding path.................................................................................................................................................................. done Filling 111942 nlabel 4927 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.047401.label Connecting and filling vertices in path at fillseed 108630 Finding path..................................................................................................................................................................................................................................................................... done Filling 108630 nlabel 6394 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.047501.label Connecting and filling vertices in path at fillseed 108600 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 108600 nlabel 6932 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.047601.label Connecting and filling vertices in path at fillseed 113589 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 113589 nlabel 9692 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.047701.label Connecting and filling vertices in path at fillseed 114701 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 114701 nlabel 5573 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.047801.label Connecting and filling vertices in path at fillseed 111394 Finding path........................................................................................................................................................................................ done Filling 111394 nlabel 4543 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.047901.label Connecting and filling vertices in path at fillseed 108597 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 108597 nlabel 6440 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.048001.label Connecting and filling vertices in path at fillseed 112786 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 112786 nlabel 10230 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.048101.label Connecting and filling vertices in path at fillseed 113816 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 113816 nlabel 5056 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.048201.label Connecting and filling vertices in path at fillseed 112331 Finding path.................................................................................................................................................................... done Filling 112331 nlabel 4621 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.048301.label Connecting and filling vertices in path at fillseed 112851 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 112851 nlabel 6170 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.048401.label Connecting and filling vertices in path at fillseed 111181 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 111181 nlabel 10298 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.048501.label Connecting and filling vertices in path at fillseed 112457 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 112457 nlabel 12387 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.048601.label Connecting and filling vertices in path at fillseed 114935 Finding path................................................................................................................................................ done Filling 114935 nlabel 5299 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.048701.label Connecting and filling vertices in path at fillseed 114706 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 114706 nlabel 6970 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.048801.label Connecting and filling vertices in path at fillseed 112047 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 112047 nlabel 9134 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.048901.label Connecting and filling vertices in path at fillseed 113380 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 113380 nlabel 8192 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.049001.label Connecting and filling vertices in path at fillseed 116791 Finding path........................................................................................................................... done Filling 116791 nlabel 4765 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.049101.label Connecting and filling vertices in path at fillseed 115695 Finding path......................................................................................................................................................................................................................................................................................................................................................................................... done Filling 115695 nlabel 6839 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.049201.label Connecting and filling vertices in path at fillseed 112023 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................... done Filling 112023 nlabel 9772 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.049301.label Connecting and filling vertices in path at fillseed 110615 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 110615 nlabel 8637 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.049401.label Connecting and filling vertices in path at fillseed 116774 Finding path........................................................................................................................................ done Filling 116774 nlabel 4883 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.049501.label Connecting and filling vertices in path at fillseed 111920 Finding path.......................................................................................................................................................................................................................................................................... done Filling 111920 nlabel 5432 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.049601.label Connecting and filling vertices in path at fillseed 114653 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 114653 nlabel 9475 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.049701.label Connecting and filling vertices in path at fillseed 110595 Finding path....................................................................................................................................................................................................................................................................................................... done Filling 110595 nlabel 8553 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.049801.label Connecting and filling vertices in path at fillseed 117511 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 117511 nlabel 6175 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.049901.label Connecting and filling vertices in path at fillseed 117242 Finding path.............................................................................................................................................................. done Filling 117242 nlabel 5222 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.050001.label Connecting and filling vertices in path at fillseed 120853 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 120853 nlabel 6608 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.050101.label Connecting and filling vertices in path at fillseed 112280 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 112280 nlabel 10768 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.050201.label Connecting and filling vertices in path at fillseed 119330 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 119330 nlabel 5009 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.050301.label Connecting and filling vertices in path at fillseed 117339 Finding path........................................................................................................................ done Filling 117339 nlabel 5018 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.050401.label Connecting and filling vertices in path at fillseed 113881 Finding path............................................................................................................................................................................................................................................................................................................................................................................ done Filling 113881 nlabel 7715 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.050501.label Connecting and filling vertices in path at fillseed 114081 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 114081 nlabel 11374 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.050601.label Connecting and filling vertices in path at fillseed 116331 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 116331 nlabel 12196 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.050701.label Connecting and filling vertices in path at fillseed 118897 Finding path.............................................................................................................................................................. done Filling 118897 nlabel 4463 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.050801.label Connecting and filling vertices in path at fillseed 114750 Finding path................................................................................................................................................................................................. done Filling 114750 nlabel 6641 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.050901.label Connecting and filling vertices in path at fillseed 114999 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 114999 nlabel 11254 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.051001.label Connecting and filling vertices in path at fillseed 116330 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 116330 nlabel 12749 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.051101.label Connecting and filling vertices in path at fillseed 118687 Finding path................................................................................................................................. done Filling 118687 nlabel 4912 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.051201.label Connecting and filling vertices in path at fillseed 116692 Finding path....................................................................................................................................................................................................................................... done Filling 116692 nlabel 6267 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.051301.label Connecting and filling vertices in path at fillseed 114035 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 114035 nlabel 12079 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.051401.label Connecting and filling vertices in path at fillseed 118077 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 118077 nlabel 12188 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.051501.label Connecting and filling vertices in path at fillseed 118585 Finding path.............................................................................................................................. done Filling 118585 nlabel 5192 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.051601.label Connecting and filling vertices in path at fillseed 117615 Finding path....................................................................................................................................................................................................................................................................... done Filling 117615 nlabel 6294 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.051701.label Connecting and filling vertices in path at fillseed 123174 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 123174 nlabel 8211 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.051801.label Connecting and filling vertices in path at fillseed 120710 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 120710 nlabel 10706 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.051901.label Connecting and filling vertices in path at fillseed 120717 Finding path....................................................................................................................................... done Filling 120717 nlabel 4829 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.052001.label Connecting and filling vertices in path at fillseed 116704 Finding path........................................................................................................................................................................................................ done Filling 116704 nlabel 5484 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.052101.label Connecting and filling vertices in path at fillseed 123195 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 123195 nlabel 9824 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.052201.label Connecting and filling vertices in path at fillseed 116019 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 116019 nlabel 9120 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.052301.label Connecting and filling vertices in path at fillseed 119812 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 119812 nlabel 12269 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.052401.label Connecting and filling vertices in path at fillseed 122579 Finding path................................................................................................................................. done Filling 122579 nlabel 4549 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.052501.label Connecting and filling vertices in path at fillseed 117622 Finding path......................................................................................................................................................................................................................................................... done Filling 117622 nlabel 6987 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.052601.label Connecting and filling vertices in path at fillseed 122409 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 122409 nlabel 5965 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.052701.label Connecting and filling vertices in path at fillseed 118864 Finding path............................................................................................................................................................................................................ done Filling 118864 nlabel 7254 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.052801.label Connecting and filling vertices in path at fillseed 119387 Finding path............................................................................................ done Filling 119387 nlabel 4452 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.052901.label Connecting and filling vertices in path at fillseed 117629 Finding path.............................................................................................................................................................................. done Filling 117629 nlabel 5842 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.053001.label Connecting and filling vertices in path at fillseed 119405 Finding path............................................................................................................................................................................................................................ done Filling 119405 nlabel 7545 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.053101.label Connecting and filling vertices in path at fillseed 121852 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 121852 nlabel 8258 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.053201.label Connecting and filling vertices in path at fillseed 124815 Finding path....................................................................................................................................... done Filling 124815 nlabel 5164 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.053301.label Connecting and filling vertices in path at fillseed 120613 Finding path............................................................................................................................ done Filling 120613 nlabel 5093 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.053401.label Connecting and filling vertices in path at fillseed 125715 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 125715 nlabel 7523 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.053501.label Connecting and filling vertices in path at fillseed 124033 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 124033 nlabel 6344 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.053601.label Connecting and filling vertices in path at fillseed 119838 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 119838 nlabel 11756 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.053701.label Connecting and filling vertices in path at fillseed 124425 Finding path................................................................................................................................................................................... done Filling 124425 nlabel 4253 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.053801.label Connecting and filling vertices in path at fillseed 123245 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 123245 nlabel 6499 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.053901.label Connecting and filling vertices in path at fillseed 125687 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 125687 nlabel 6884 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.054001.label Connecting and filling vertices in path at fillseed 121206 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................... done Filling 121206 nlabel 8530 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.054101.label Connecting and filling vertices in path at fillseed 125676 Finding path................................................................................................................................................................. done Filling 125676 nlabel 5320 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.054201.label Connecting and filling vertices in path at fillseed 124118 Finding path.................................................................................................................................................................................................... done Filling 124118 nlabel 5060 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.054301.label Connecting and filling vertices in path at fillseed 120958 Finding path......................................................................................................................................................................................................................................................................... done Filling 120958 nlabel 7415 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.054401.label Connecting and filling vertices in path at fillseed 122211 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 122211 nlabel 10681 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.054501.label Connecting and filling vertices in path at fillseed 126548 Finding path............................................................................................................ done Filling 126548 nlabel 3249 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.054601.label Connecting and filling vertices in path at fillseed 124918 Finding path......................................................................................................................................................................... done Filling 124918 nlabel 6316 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.054701.label Connecting and filling vertices in path at fillseed 123384 Finding path......................................................................................................................................................................................................................................................................................... done Filling 123384 nlabel 8914 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.054801.label Connecting and filling vertices in path at fillseed 122852 Finding path........................................................................................................................................................................................................................................................ done Filling 122852 nlabel 7169 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.054901.label Connecting and filling vertices in path at fillseed 125798 Finding path............................................................................................................................................................................................................ done Filling 125798 nlabel 4927 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.055001.label Connecting and filling vertices in path at fillseed 123292 Finding path....................................................................................................................................................................................................................................................................................... done Filling 123292 nlabel 7180 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.055101.label Connecting and filling vertices in path at fillseed 123466 Finding path........................................................................................................................................................................................................................................................................................................................ done Filling 123466 nlabel 8629 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.055201.label Connecting and filling vertices in path at fillseed 127262 Finding path.............................................................................................................. done Filling 127262 nlabel 4070 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.055301.label Connecting and filling vertices in path at fillseed 127330 Finding path............................................................................................................................................................................................................................................................................ done Filling 127330 nlabel 5535 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.055401.label Connecting and filling vertices in path at fillseed 127893 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 127893 nlabel 5912 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.055501.label Connecting and filling vertices in path at fillseed 125562 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 125562 nlabel 9843 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.055601.label Connecting and filling vertices in path at fillseed 126133 Finding path......................................................................................................... done Filling 126133 nlabel 4949 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.055701.label Connecting and filling vertices in path at fillseed 127937 Finding path....................................................................................................................... done Filling 127937 nlabel 3170 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.055801.label Connecting and filling vertices in path at fillseed 124158 Finding path............................................................................................................................................................................................................................................................................................................ done Filling 124158 nlabel 6901 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.055901.label Connecting and filling vertices in path at fillseed 127417 Finding path.................................................................................................................................................................................................................................................................................................................................................. done Filling 127417 nlabel 9291 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.056001.label Connecting and filling vertices in path at fillseed 128352 Finding path........................................................................................................................................................................................................................................................................................................... done Filling 128352 nlabel 6944 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.056101.label Connecting and filling vertices in path at fillseed 126039 Finding path.......................................................................................................................................... done Filling 126039 nlabel 5115 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.056201.label Connecting and filling vertices in path at fillseed 124939 Finding path............................................................................................................................................................ done Filling 124939 nlabel 5974 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.056301.label Connecting and filling vertices in path at fillseed 126401 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 126401 nlabel 6771 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.056401.label Connecting and filling vertices in path at fillseed 129303 Finding path................................................................................................................................................... done Filling 129303 nlabel 4774 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.056501.label Connecting and filling vertices in path at fillseed 131994 Finding path...................................................................................................................... done Filling 131994 nlabel 4871 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.056601.label Connecting and filling vertices in path at fillseed 125787 Finding path......................................................................................................................................................................... done Filling 125787 nlabel 6304 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.056701.label Connecting and filling vertices in path at fillseed 128119 Finding path........................................................................................................................................................................................................................................................................ done Filling 128119 nlabel 9334 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.056801.label Connecting and filling vertices in path at fillseed 126919 Finding path...................................................................................................... done Filling 126919 nlabel 5044 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.056901.label Connecting and filling vertices in path at fillseed 129426 Finding path................................................................................................................................................... done Filling 129426 nlabel 3988 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.057001.label Connecting and filling vertices in path at fillseed 125814 Finding path............................................................................................................................................................................................................................................ done Filling 125814 nlabel 8296 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.057101.label Connecting and filling vertices in path at fillseed 129699 Finding path............................................................................................................................................................................................................................................................................................................................ done Filling 129699 nlabel 8364 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.057201.label Connecting and filling vertices in path at fillseed 130182 Finding path................................................................................................................. done Filling 130182 nlabel 4284 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.057301.label Connecting and filling vertices in path at fillseed 130238 Finding path............................................................................................................................ done Filling 130238 nlabel 4107 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.057401.label Connecting and filling vertices in path at fillseed 128816 Finding path........................................................................................................................................................................................................................................... done Filling 128816 nlabel 8608 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.057501.label Connecting and filling vertices in path at fillseed 130590 Finding path.................................................................................................................................................................................................................................................... done Filling 130590 nlabel 8576 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.057601.label Connecting and filling vertices in path at fillseed 132618 Finding path................................................................................................................................................... done Filling 132618 nlabel 5257 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.057701.label Connecting and filling vertices in path at fillseed 126583 Finding path.............................................................................................................................................................................. done Filling 126583 nlabel 6033 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.057801.label Connecting and filling vertices in path at fillseed 132323 Finding path........................................................................................................................................................................................................ done Filling 132323 nlabel 6201 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.057901.label Connecting and filling vertices in path at fillseed 130581 Finding path........................................................................................................................................................................................................................ done Filling 130581 nlabel 8627 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.058001.label Connecting and filling vertices in path at fillseed 133158 Finding path............................................................................................................................................................ done Filling 133158 nlabel 5056 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.058101.label Connecting and filling vertices in path at fillseed 127973 Finding path..................................................................................................................................................................... done Filling 127973 nlabel 6136 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.058201.label Connecting and filling vertices in path at fillseed 130393 Finding path......................................................................................................................................................................................................................................................... done Filling 130393 nlabel 7897 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.058301.label Connecting and filling vertices in path at fillseed 132352 Finding path................................................................................................................................ done Filling 132352 nlabel 4637 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.058401.label Connecting and filling vertices in path at fillseed 129451 Finding path........................................................................................................................................................................................................................................................... done Filling 129451 nlabel 4926 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.058501.label Connecting and filling vertices in path at fillseed 130991 Finding path..................................................................................................................................................... done Filling 130991 nlabel 5343 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.058601.label Connecting and filling vertices in path at fillseed 130772 Finding path................................................................................................................................................................................................ done Filling 130772 nlabel 6540 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.058701.label Connecting and filling vertices in path at fillseed 133148 Finding path................................................................................................................................................... done Filling 133148 nlabel 5101 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.058801.label Connecting and filling vertices in path at fillseed 133560 Finding path.......................................................................................................................................................... done Filling 133560 nlabel 4185 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.058901.label Connecting and filling vertices in path at fillseed 131742 Finding path.............................................................................................................................................................. done Filling 131742 nlabel 5498 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.059001.label Connecting and filling vertices in path at fillseed 131523 Finding path................................................................................................................................................................ done Filling 131523 nlabel 6681 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.059101.label Connecting and filling vertices in path at fillseed 134950 Finding path.............................................................................................................................. done Filling 134950 nlabel 4223 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.059201.label Connecting and filling vertices in path at fillseed 133560 Finding path.............................................................................................................................................................. done Filling 133560 nlabel 3958 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.059301.label Connecting and filling vertices in path at fillseed 131792 Finding path................................................................................................................................................ done Filling 131792 nlabel 5785 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.059401.label Connecting and filling vertices in path at fillseed 130904 Finding path............................................................................................................................................................................................ done Filling 130904 nlabel 6388 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.059501.label Connecting and filling vertices in path at fillseed 132134 Finding path............................................................................................................................................................................................................................................... done Filling 132134 nlabel 7544 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.059601.label Connecting and filling vertices in path at fillseed 133017 Finding path............................................................................................................................................................................................ done Filling 133017 nlabel 5531 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.059701.label Connecting and filling vertices in path at fillseed 132380 Finding path.............................................................................................................................................................................................................. done Filling 132380 nlabel 5225 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.059801.label Connecting and filling vertices in path at fillseed 133474 Finding path..................................................................................................................................................................... done Filling 133474 nlabel 6861 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.059901.label Connecting and filling vertices in path at fillseed 134043 Finding path............................................................................................................................. done Filling 134043 nlabel 3334 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.060001.label Connecting and filling vertices in path at fillseed 132427 Finding path.......................................................................................................................................................................... done Filling 132427 nlabel 5968 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.060101.label Connecting and filling vertices in path at fillseed 133499 Finding path................................................................................................................................................................................................................................................................. done Filling 133499 nlabel 3820 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.060201.label Connecting and filling vertices in path at fillseed 132776 Finding path........................................................................................................................................................................................... done Filling 132776 nlabel 6639 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.060301.label Connecting and filling vertices in path at fillseed 135529 Finding path............................................................................................................................ done Filling 135529 nlabel 4770 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.060401.label Connecting and filling vertices in path at fillseed 134488 Finding path.................................................................................................................................................................................................................................................. done Filling 134488 nlabel 5311 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.060501.label Connecting and filling vertices in path at fillseed 133871 Finding path................................................................................................................................................................ done Filling 133871 nlabel 6594 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.060601.label Connecting and filling vertices in path at fillseed 135543 Finding path.................................................................................................................................... done Filling 135543 nlabel 4417 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.060701.label Connecting and filling vertices in path at fillseed 134988 Finding path................................................................................................................................................ done Filling 134988 nlabel 3906 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.060801.label Connecting and filling vertices in path at fillseed 133096 Finding path........................................................................................................................................................................................................................................................................................................ done Filling 133096 nlabel 5970 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.060901.label Connecting and filling vertices in path at fillseed 133296 Finding path.................................................................................................................................................................................................................. done Filling 133296 nlabel 7573 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.061001.label Connecting and filling vertices in path at fillseed 134534 Finding path................................................................................................................ done Filling 134534 nlabel 3062 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.061101.label Connecting and filling vertices in path at fillseed 134979 Finding path......................................................................................................................................................................................................... done Filling 134979 nlabel 4998 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.061201.label Connecting and filling vertices in path at fillseed 133708 Finding path......................................................................................................................................................................................................................................................................................... done Filling 133708 nlabel 6642 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.061301.label Connecting and filling vertices in path at fillseed 133822 Finding path................................................................................................................................................................................................. done Filling 133822 nlabel 6682 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.061401.label Connecting and filling vertices in path at fillseed 135417 Finding path............................................................................................................................. done Filling 135417 nlabel 3367 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.061501.label Connecting and filling vertices in path at fillseed 134609 Finding path............................................................................................................................................................................ done Filling 134609 nlabel 6109 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.061601.label Connecting and filling vertices in path at fillseed 133808 Finding path......................................................................................................................................................................................................................... done Filling 133808 nlabel 6191 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.061701.label Connecting and filling vertices in path at fillseed 135823 Finding path....................................................................................................................................................... done Filling 135823 nlabel 3750 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.061801.label Connecting and filling vertices in path at fillseed 135371 Finding path.......................................................................................................................................................................................................... done Filling 135371 nlabel 4828 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.061901.label Connecting and filling vertices in path at fillseed 135224 Finding path............................................................................................................................................................................................................................................................ done Filling 135224 nlabel 6752 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.062001.label Connecting and filling vertices in path at fillseed 136237 Finding path...................................................................................................................................... done Filling 136237 nlabel 3476 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.062101.label Connecting and filling vertices in path at fillseed 135024 Finding path......................................................................................................................................................... done Filling 135024 nlabel 4645 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.062201.label Connecting and filling vertices in path at fillseed 135089 Finding path.................................................................................................................................................................................................................................. done Filling 135089 nlabel 6073 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.062301.label Connecting and filling vertices in path at fillseed 136817 Finding path............................................................................................................................. done Filling 136817 nlabel 4161 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.062401.label Connecting and filling vertices in path at fillseed 135846 Finding path.................................................................................................................................................... done Filling 135846 nlabel 4394 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.062501.label Connecting and filling vertices in path at fillseed 136233 Finding path........................................................................................................................................................................................................... done Filling 136233 nlabel 4527 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.062601.label Connecting and filling vertices in path at fillseed 135661 Finding path.............................................................................................................................................................................................................................................. done Filling 135661 nlabel 6294 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.062701.label Connecting and filling vertices in path at fillseed 136882 Finding path................................................................................................................................... done Filling 136882 nlabel 4076 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.062801.label Connecting and filling vertices in path at fillseed 135869 Finding path........................................................................................................................................................ done Filling 135869 nlabel 5225 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.062901.label Connecting and filling vertices in path at fillseed 135276 Finding path................................................................................................................................................... done Filling 135276 nlabel 5849 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.063001.label Connecting and filling vertices in path at fillseed 135667 Finding path................................................................................................................................................................................................................ done Filling 135667 nlabel 6424 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.063101.label Connecting and filling vertices in path at fillseed 136566 Finding path................................................................................................................................... done Filling 136566 nlabel 4456 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.063201.label Connecting and filling vertices in path at fillseed 136667 Finding path............................................................................................................................................................................................ done Filling 136667 nlabel 6409 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.063301.label Connecting and filling vertices in path at fillseed 136367 Finding path..................................................................................................................................................................................................... done Filling 136367 nlabel 5923 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.063401.label Connecting and filling vertices in path at fillseed 136646 Finding path................................................................................................................................................... done Filling 136646 nlabel 4486 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.063501.label Connecting and filling vertices in path at fillseed 137219 Finding path............................................................................................................................................................................. done Filling 137219 nlabel 6307 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.063601.label Connecting and filling vertices in path at fillseed 137393 Finding path....................................................................................................................................... done Filling 137393 nlabel 4130 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.063701.label Connecting and filling vertices in path at fillseed 137192 Finding path............................................................................................................................................................................................................ done Filling 137192 nlabel 5676 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.063801.label Connecting and filling vertices in path at fillseed 137033 Finding path................................................................................................................................................................................... done Filling 137033 nlabel 5904 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.063901.label Connecting and filling vertices in path at fillseed 137490 Finding path.................................................................................................................................... done Filling 137490 nlabel 4103 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.064001.label Connecting and filling vertices in path at fillseed 137460 Finding path...................................................................................................................................................................... done Filling 137460 nlabel 4886 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.064101.label Connecting and filling vertices in path at fillseed 137264 Finding path......................................................................................................................................... done Filling 137264 nlabel 6026 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.064201.label Connecting and filling vertices in path at fillseed 137450 Finding path...................................................................................................................................................................... done Filling 137450 nlabel 5511 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.064301.label Connecting and filling vertices in path at fillseed 137487 Finding path.................................................................................................................................. done Filling 137487 nlabel 4249 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.064401.label Connecting and filling vertices in path at fillseed 137374 Finding path............................................................................................................................................ done Filling 137374 nlabel 5818 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.064501.label ================= compute_lgi('lh.pial','lh.pial-outer-smoothed','/home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial-outer-smoothed-normals.asc',100,25,'/home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial'); exit ================= < M A T L A B (R) > Copyright 1984-2018 The MathWorks, Inc. R2018b (9.5.0.944444) 64-bit (glnxa64) August 28, 2018 For online documentation, see https://www.mathworks.com/support For product information, visit www.mathworks.com. >> loading datas ... FREESURFER_READ_SURF [v 1.2 ] ...reading surface file: lh.pial ...reading triangle file ...adding 1 to face indices for matlab compatibility. ...done ( 0.02 sec) FREESURFER_READ_SURF [v 1.2 ] ...reading surface file: lh.pial-outer-smoothed ...reading triangle file ...adding 1 to face indices for matlab compatibility. ...done ( 0.01 sec) preparing outer mesh structure ... face 5000 / 129120 face 10000 / 129120 face 15000 / 129120 face 20000 / 129120 face 25000 / 129120 face 30000 / 129120 face 35000 / 129120 face 40000 / 129120 face 45000 / 129120 face 50000 / 129120 face 55000 / 129120 face 60000 / 129120 face 65000 / 129120 face 70000 / 129120 face 75000 / 129120 face 80000 / 129120 face 85000 / 129120 face 90000 / 129120 face 95000 / 129120 face 100000 / 129120 face 105000 / 129120 face 110000 / 129120 face 115000 / 129120 face 120000 / 129120 face 125000 / 129120 reading normals info ... mesh_outer = struct with fields: vertices: [64562x3 double] faces: [129120x3 double] facesOfVertex: [64562x1 struct] vertexNormal: [64562x3 double] preparing pial mesh structure ... face 5000 / 275844 face 10000 / 275844 face 15000 / 275844 face 20000 / 275844 face 25000 / 275844 face 30000 / 275844 face 35000 / 275844 face 40000 / 275844 face 45000 / 275844 face 50000 / 275844 face 55000 / 275844 face 60000 / 275844 face 65000 / 275844 face 70000 / 275844 face 75000 / 275844 face 80000 / 275844 face 85000 / 275844 face 90000 / 275844 face 95000 / 275844 face 100000 / 275844 face 105000 / 275844 face 110000 / 275844 face 115000 / 275844 face 120000 / 275844 face 125000 / 275844 face 130000 / 275844 face 135000 / 275844 face 140000 / 275844 face 145000 / 275844 face 150000 / 275844 face 155000 / 275844 face 160000 / 275844 face 165000 / 275844 face 170000 / 275844 face 175000 / 275844 face 180000 / 275844 face 185000 / 275844 face 190000 / 275844 face 195000 / 275844 face 200000 / 275844 face 205000 / 275844 face 210000 / 275844 face 215000 / 275844 face 220000 / 275844 face 225000 / 275844 face 230000 / 275844 face 235000 / 275844 face 240000 / 275844 face 245000 / 275844 face 250000 / 275844 face 255000 / 275844 face 260000 / 275844 face 265000 / 275844 face 270000 / 275844 face 275000 / 275844 mesh_total = struct with fields: vertices: [137924x3 double] faces: [275844x3 double] facesOfVertex: [137924x1 struct] ...searching for mesh edges...done (69.01 sec). loading outer area information... lGI for vertex number 1 of the outer mesh is 2.1817 ratio saved at 1 lGI for vertex number 101 of the outer mesh is 2.4759 lGI for vertex number 201 of the outer mesh is 2.5413 lGI for vertex number 301 of the outer mesh is 2.7631 lGI for vertex number 401 of the outer mesh is 2.4087 lGI for vertex number 501 of the outer mesh is 2.4432 lGI for vertex number 601 of the outer mesh is 2.9084 lGI for vertex number 701 of the outer mesh is 2.8978 lGI for vertex number 801 of the outer mesh is 2.4416 lGI for vertex number 901 of the outer mesh is 2.893 lGI for vertex number 1001 of the outer mesh is 2.6564 lGI for vertex number 1101 of the outer mesh is 2.5666 lGI for vertex number 1201 of the outer mesh is 3.1065 lGI for vertex number 1301 of the outer mesh is 2.574 lGI for vertex number 1401 of the outer mesh is 2.6037 lGI for vertex number 1501 of the outer mesh is 3.0223 lGI for vertex number 1601 of the outer mesh is 2.2854 lGI for vertex number 1701 of the outer mesh is 2.8501 lGI for vertex number 1801 of the outer mesh is 2.6912 lGI for vertex number 1901 of the outer mesh is 2.526 lGI for vertex number 2001 of the outer mesh is 2.9326 lGI for vertex number 2101 of the outer mesh is 2.7889 lGI for vertex number 2201 of the outer mesh is 2.9411 lGI for vertex number 2301 of the outer mesh is 3.2713 lGI for vertex number 2401 of the outer mesh is 3.0446 lGI for vertex number 2501 of the outer mesh is 2.8496 lGI for vertex number 2601 of the outer mesh is 2.9138 lGI for vertex number 2701 of the outer mesh is 3.4211 lGI for vertex number 2801 of the outer mesh is 3.2245 lGI for vertex number 2901 of the outer mesh is 2.9491 lGI for vertex number 3001 of the outer mesh is 3.4673 lGI for vertex number 3101 of the outer mesh is 2.7568 lGI for vertex number 3201 of the outer mesh is 2.9552 lGI for vertex number 3301 of the outer mesh is 3.2442 lGI for vertex number 3401 of the outer mesh is 2.5306 lGI for vertex number 3501 of the outer mesh is 2.9854 lGI for vertex number 3601 of the outer mesh is 3.2428 lGI for vertex number 3701 of the outer mesh is 2.7587 lGI for vertex number 3801 of the outer mesh is 2.9147 lGI for vertex number 3901 of the outer mesh is 3.0592 lGI for vertex number 4001 of the outer mesh is 3.3721 lGI for vertex number 4101 of the outer mesh is 2.7683 lGI for vertex number 4201 of the outer mesh is 2.5002 lGI for vertex number 4301 of the outer mesh is 3.3453 lGI for vertex number 4401 of the outer mesh is 2.8184 lGI for vertex number 4501 of the outer mesh is 3.3893 lGI for vertex number 4601 of the outer mesh is 3.4722 lGI for vertex number 4701 of the outer mesh is 3.3921 lGI for vertex number 4801 of the outer mesh is 3.1923 lGI for vertex number 4901 of the outer mesh is 2.7099 lGI for vertex number 5001 of the outer mesh is 3.5147 lGI for vertex number 5101 of the outer mesh is 3.2963 lGI for vertex number 5201 of the outer mesh is 3.4009 lGI for vertex number 5301 of the outer mesh is 3.1574 lGI for vertex number 5401 of the outer mesh is 3.8918 lGI for vertex number 5501 of the outer mesh is 3.3338 lGI for vertex number 5601 of the outer mesh is 2.9675 lGI for vertex number 5701 of the outer mesh is 3.2193 lGI for vertex number 5801 of the outer mesh is 3.9149 lGI for vertex number 5901 of the outer mesh is 3.4845 lGI for vertex number 6001 of the outer mesh is 4.2182 lGI for vertex number 6101 of the outer mesh is 3.2046 lGI for vertex number 6201 of the outer mesh is 4.4583 lGI for vertex number 6301 of the outer mesh is 3.5629 lGI for vertex number 6401 of the outer mesh is 3.7506 lGI for vertex number 6501 of the outer mesh is 2.8848 lGI for vertex number 6601 of the outer mesh is 3.3457 lGI for vertex number 6701 of the outer mesh is 2.9779 lGI for vertex number 6801 of the outer mesh is 3.266 lGI for vertex number 6901 of the outer mesh is 4.009 lGI for vertex number 7001 of the outer mesh is 3.5425 lGI for vertex number 7101 of the outer mesh is 3.0328 lGI for vertex number 7201 of the outer mesh is 2.9542 lGI for vertex number 7301 of the outer mesh is 4.1587 lGI for vertex number 7401 of the outer mesh is 4.5393 lGI for vertex number 7501 of the outer mesh is 3.2073 lGI for vertex number 7601 of the outer mesh is 3.8969 lGI for vertex number 7701 of the outer mesh is 3.6129 lGI for vertex number 7801 of the outer mesh is 4.2652 lGI for vertex number 7901 of the outer mesh is 3.2848 lGI for vertex number 8001 of the outer mesh is 3.883 lGI for vertex number 8101 of the outer mesh is 4.128 lGI for vertex number 8201 of the outer mesh is 2.8 lGI for vertex number 8301 of the outer mesh is 3.2454 lGI for vertex number 8401 of the outer mesh is 3.3291 lGI for vertex number 8501 of the outer mesh is 3.4564 lGI for vertex number 8601 of the outer mesh is 3.4049 lGI for vertex number 8701 of the outer mesh is 3.0803 lGI for vertex number 8801 of the outer mesh is 3.2929 lGI for vertex number 8901 of the outer mesh is 4.2113 lGI for vertex number 9001 of the outer mesh is 2.9887 lGI for vertex number 9101 of the outer mesh is 3.2706 lGI for vertex number 9201 of the outer mesh is 3.0191 lGI for vertex number 9301 of the outer mesh is 4.2743 lGI for vertex number 9401 of the outer mesh is 3.0196 lGI for vertex number 9501 of the outer mesh is 3.3333 lGI for vertex number 9601 of the outer mesh is 3.13 lGI for vertex number 9701 of the outer mesh is 3.28 lGI for vertex number 9801 of the outer mesh is 3.5032 lGI for vertex number 9901 of the outer mesh is 3.4556 lGI for vertex number 10001 of the outer mesh is 3.5771 ratio saved at 10001 lGI for vertex number 10101 of the outer mesh is 3.3871 lGI for vertex number 10201 of the outer mesh is 3.352 lGI for vertex number 10301 of the outer mesh is 3.3302 lGI for vertex number 10401 of the outer mesh is 3.5269 lGI for vertex number 10501 of the outer mesh is 3.5418 lGI for vertex number 10601 of the outer mesh is 3.3332 lGI for vertex number 10701 of the outer mesh is 3.2432 lGI for vertex number 10801 of the outer mesh is 3.335 lGI for vertex number 10901 of the outer mesh is 3.1492 lGI for vertex number 11001 of the outer mesh is 3.3974 lGI for vertex number 11101 of the outer mesh is 3.4722 lGI for vertex number 11201 of the outer mesh is 3.275 lGI for vertex number 11301 of the outer mesh is 3.8315 lGI for vertex number 11401 of the outer mesh is 3.4067 lGI for vertex number 11501 of the outer mesh is 3.2544 lGI for vertex number 11601 of the outer mesh is 4.1981 lGI for vertex number 11701 of the outer mesh is 3.9789 lGI for vertex number 11801 of the outer mesh is 4.0413 lGI for vertex number 11901 of the outer mesh is 3.1606 lGI for vertex number 12001 of the outer mesh is 3.2939 lGI for vertex number 12101 of the outer mesh is 3.0111 lGI for vertex number 12201 of the outer mesh is 4.0298 lGI for vertex number 12301 of the outer mesh is 3.905 lGI for vertex number 12401 of the outer mesh is 3.2154 lGI for vertex number 12501 of the outer mesh is 2.9622 lGI for vertex number 12601 of the outer mesh is 4.0942 lGI for vertex number 12701 of the outer mesh is 4.0372 lGI for vertex number 12801 of the outer mesh is 4.1499 lGI for vertex number 12901 of the outer mesh is 2.9173 lGI for vertex number 13001 of the outer mesh is 3.8835 lGI for vertex number 13101 of the outer mesh is 3.6834 lGI for vertex number 13201 of the outer mesh is 4.506 lGI for vertex number 13301 of the outer mesh is 3.7536 lGI for vertex number 13401 of the outer mesh is 3.3043 lGI for vertex number 13501 of the outer mesh is 2.9148 lGI for vertex number 13601 of the outer mesh is 3.4998 lGI for vertex number 13701 of the outer mesh is 3.7103 lGI for vertex number 13801 of the outer mesh is 3.4804 lGI for vertex number 13901 of the outer mesh is 2.6516 lGI for vertex number 14001 of the outer mesh is 3.905 lGI for vertex number 14101 of the outer mesh is 4.4255 lGI for vertex number 14201 of the outer mesh is 3.0984 lGI for vertex number 14301 of the outer mesh is 3.5208 lGI for vertex number 14401 of the outer mesh is 3.267 lGI for vertex number 14501 of the outer mesh is 3.2596 lGI for vertex number 14601 of the outer mesh is 3.7655 lGI for vertex number 14701 of the outer mesh is 3.3709 lGI for vertex number 14801 of the outer mesh is 3.1775 lGI for vertex number 14901 of the outer mesh is 3.7297 lGI for vertex number 15001 of the outer mesh is 3.4089 lGI for vertex number 15101 of the outer mesh is 3.4778 lGI for vertex number 15201 of the outer mesh is 2.8584 lGI for vertex number 15301 of the outer mesh is 4.2177 lGI for vertex number 15401 of the 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lGI for vertex number 58201 of the outer mesh is 2.5203 lGI for vertex number 58301 of the outer mesh is 3.4153 lGI for vertex number 58401 of the outer mesh is 1.877 lGI for vertex number 58501 of the outer mesh is 2.3075 lGI for vertex number 58601 of the outer mesh is 2.5822 lGI for vertex number 58701 of the outer mesh is 2.9426 lGI for vertex number 58801 of the outer mesh is 2.09 lGI for vertex number 58901 of the outer mesh is 1.9847 lGI for vertex number 59001 of the outer mesh is 2.6802 lGI for vertex number 59101 of the outer mesh is 3.0514 lGI for vertex number 59201 of the outer mesh is 1.845 lGI for vertex number 59301 of the outer mesh is 1.8838 lGI for vertex number 59401 of the outer mesh is 2.3741 lGI for vertex number 59501 of the outer mesh is 2.9464 lGI for vertex number 59601 of the outer mesh is 3.4679 lGI for vertex number 59701 of the outer mesh is 2.4103 lGI for vertex number 59801 of the outer mesh is 2.45 lGI for vertex number 59901 of the outer mesh is 2.9816 lGI for vertex number 60001 of the outer mesh is 1.841 ratio saved at 60001 lGI for vertex number 60101 of the outer mesh is 2.4471 lGI for vertex number 60201 of the outer mesh is 1.8875 lGI for vertex number 60301 of the outer mesh is 3.0842 lGI for vertex number 60401 of the outer mesh is 2.05 lGI for vertex number 60501 of the outer mesh is 2.289 lGI for vertex number 60601 of the outer mesh is 3.0289 lGI for vertex number 60701 of the outer mesh is 2.0057 lGI for vertex number 60801 of the outer mesh is 1.9131 lGI for vertex number 60901 of the outer mesh is 2.8305 lGI for vertex number 61001 of the outer mesh is 3.4156 lGI for vertex number 61101 of the outer mesh is 1.764 lGI for vertex number 61201 of the outer mesh is 2.2186 lGI for vertex number 61301 of the outer mesh is 3.0479 lGI for vertex number 61401 of the outer mesh is 3.0828 lGI for vertex number 61501 of the outer mesh is 1.8784 lGI for vertex number 61601 of the outer mesh is 2.4826 lGI for vertex number 61701 of the outer mesh is 2.8844 lGI for vertex number 61801 of the outer mesh is 1.9561 lGI for vertex number 61901 of the outer mesh is 2.1416 lGI for vertex number 62001 of the outer mesh is 3.1036 lGI for vertex number 62101 of the outer mesh is 1.8575 lGI for vertex number 62201 of the outer mesh is 2.1299 lGI for vertex number 62301 of the outer mesh is 2.6906 lGI for vertex number 62401 of the outer mesh is 2.1057 lGI for vertex number 62501 of the outer mesh is 2.1725 lGI for vertex number 62601 of the outer mesh is 2.0831 lGI for vertex number 62701 of the outer mesh is 2.9373 lGI for vertex number 62801 of the outer mesh is 2.0792 lGI for vertex number 62901 of the outer mesh is 2.3466 lGI for vertex number 63001 of the outer mesh is 2.7247 lGI for vertex number 63101 of the outer mesh is 2.9794 lGI for vertex number 63201 of the outer mesh is 2.2282 lGI for vertex number 63301 of the outer mesh is 2.5345 lGI for vertex number 63401 of the outer mesh is 2.7129 lGI for vertex number 63501 of the outer mesh is 2.1568 lGI for vertex number 63601 of the outer mesh is 2.5428 lGI for vertex number 63701 of the outer mesh is 2.1852 lGI for vertex number 63801 of the outer mesh is 2.3886 lGI for vertex number 63901 of the outer mesh is 2.421 lGI for vertex number 64001 of the outer mesh is 2.1546 lGI for vertex number 64101 of the outer mesh is 2.3543 lGI for vertex number 64201 of the outer mesh is 2.5485 lGI for vertex number 64301 of the outer mesh is 2.3725 lGI for vertex number 64401 of the outer mesh is 2.1829 lGI for vertex number 64501 of the outer mesh is 2.5121 .. Almost finished .. now back-propagating values on the folded mesh .. average_lGI_over_the_hemisphere = 3.4662 DONE. deltaT = 616.5700 ================= mris_convert -c /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial/lh.pial_lgi.asc lh.pial lh.pial_lgi ================= ================= rm -Rf /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-lh.pial ================= done. Start: Mon 21 Nov 2022 05:37:19 PM CST End: Mon 21 Nov 2022 06:26:03 PM CST #-------------------------------------------- #@# Local Gyrification Index rh Mon 21 Nov 2022 06:26:03 PM CST mris_compute_lgi --i rh.pial ================= rm -Rf /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial ================= ================= mkdir -p /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial ================= ================= mris_fill -c -r 1 rh.pial /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.filled.mgz ================= reading surface from rh.pial... writing filled volume to /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.filled.mgz... conforming output volume setting resolution for intermediate calculations to 1.0000 ================= make_outer_surface('/home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.filled.mgz',15,'/home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial-outer'); exit ================= < M A T L A B (R) > Copyright 1984-2018 The MathWorks, Inc. R2018b (9.5.0.944444) 64-bit (glnxa64) August 28, 2018 For online documentation, see https://www.mathworks.com/support For product information, visit www.mathworks.com. >> reading filled volume... closing volume... morphological closing done. writing outer surface... ================= mris_extract_main_component /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial-outer /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial-outer-main ================= counting number of connected components... 63706 voxel in cpt #1: X=2 [v=63706,e=191112,f=127408] located at (27.081499, 2.723464, 24.743557) For the whole surface: X=2 [v=63706,e=191112,f=127408] One single component has been found nothing to do done ================= mris_smooth -nw -n 30 /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial-outer-main ./rh.pial-outer-smoothed ================= smoothing for 30 iterations smoothing surface tessellation for 30 iterations... smoothing complete - recomputing first and second fundamental forms... ================= mris_euler_number ./rh.pial-outer-smoothed ================= euler # = v-e+f = 2g-2: 63706 - 191112 + 127408 = 2 --> 0 holes F =2V-4: 127408 = 127412-4 (0) 2E=3F: 382224 = 382224 (0) total defect index = 0 ================= mris_convert -n rh.pial-outer-smoothed /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial-outer-smoothed-normals.asc ================= ================= find_corresponding_center_FSformat('rh.pial','rh.pial-outer-smoothed',100,'/home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial','/tmp/mrc_1502096_.m'); exit ================= < M A T L A B (R) > Copyright 1984-2018 The MathWorks, Inc. R2018b (9.5.0.944444) 64-bit (glnxa64) August 28, 2018 For online documentation, see https://www.mathworks.com/support For product information, visit www.mathworks.com. >> FREESURFER_READ_SURF [v 1.2 ] ...reading surface file: rh.pial ...reading triangle file ...adding 1 to face indices for matlab compatibility. ...done ( 0.02 sec) FREESURFER_READ_SURF [v 1.2 ] ...reading surface file: rh.pial-outer-smoothed ...reading triangle file ...adding 1 to face indices for matlab compatibility. ...done ( 0.01 sec) deltaT = 1.3700 ================= make_roi_paths('rh.pial','rh.pial-outer-smoothed',25,100,'/home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial','/tmp/mrp_1502096_.m'); exit ================= < M A T L A B (R) > Copyright 1984-2018 The MathWorks, Inc. R2018b (9.5.0.944444) 64-bit (glnxa64) August 28, 2018 For online documentation, see https://www.mathworks.com/support For product information, visit www.mathworks.com. >> loading datas ... FREESURFER_READ_SURF [v 1.2 ] ...reading surface file: rh.pial ...reading triangle file ...adding 1 to face indices for matlab compatibility. ...done ( 0.02 sec) FREESURFER_READ_SURF [v 1.2 ] ...reading surface file: rh.pial-outer-smoothed ...reading triangle file ...adding 1 to face indices for matlab compatibility. ...done ( 0.01 sec) preparing outer mesh structure ... face 5000 / 127408 face 10000 / 127408 face 15000 / 127408 face 20000 / 127408 face 25000 / 127408 face 30000 / 127408 face 35000 / 127408 face 40000 / 127408 face 45000 / 127408 face 50000 / 127408 face 55000 / 127408 face 60000 / 127408 face 65000 / 127408 face 70000 / 127408 face 75000 / 127408 face 80000 / 127408 face 85000 / 127408 face 90000 / 127408 face 95000 / 127408 face 100000 / 127408 face 105000 / 127408 face 110000 / 127408 face 115000 / 127408 face 120000 / 127408 face 125000 / 127408 mesh_outer = struct with fields: vertices: [63706x3 double] faces: [127408x3 double] facesOfVertex: [63706x1 struct] preparing pial mesh structure ... ...searching for mesh edges...done (65.09 sec). ... creating path file for vertex 1 / 63706 area file for outer ROIs saved at 1 ... creating path file for vertex 101 / 63706 ... creating path file for vertex 201 / 63706 ... creating path file for vertex 301 / 63706 ... creating path file for vertex 401 / 63706 ... creating path file for vertex 501 / 63706 ... creating path file for vertex 601 / 63706 ... creating path file for vertex 701 / 63706 ... creating path file for vertex 801 / 63706 ... creating path file for vertex 901 / 63706 ... creating path file for vertex 1001 / 63706 ... creating path file for vertex 1101 / 63706 ... creating path file for vertex 1201 / 63706 ... creating path file for vertex 1301 / 63706 ... creating path file for vertex 1401 / 63706 ... creating path file for vertex 1501 / 63706 ... creating path file for vertex 1601 / 63706 ... creating path file for vertex 1701 / 63706 ... creating path file for vertex 1801 / 63706 ... creating path file for vertex 1901 / 63706 ... creating path file for vertex 2001 / 63706 ... creating path file for vertex 2101 / 63706 ... creating path file for vertex 2201 / 63706 ... creating path file for vertex 2301 / 63706 ... creating path file for vertex 2401 / 63706 ... creating path file for vertex 2501 / 63706 ... creating path file for vertex 2601 / 63706 ... creating path file for vertex 2701 / 63706 ... creating path file for vertex 2801 / 63706 ... creating path file for vertex 2901 / 63706 ... creating path file for vertex 3001 / 63706 ... creating path file for vertex 3101 / 63706 ... creating path file for vertex 3201 / 63706 ... creating path file for vertex 3301 / 63706 ... creating path file for vertex 3401 / 63706 ... creating path file for vertex 3501 / 63706 ... creating path file for vertex 3601 / 63706 ... creating path file for vertex 3701 / 63706 ... creating path file for vertex 3801 / 63706 ... creating path file for vertex 3901 / 63706 ... creating path file for vertex 4001 / 63706 ... creating path file for vertex 4101 / 63706 ... creating path file for vertex 4201 / 63706 ... creating path file for vertex 4301 / 63706 ... creating path file for vertex 4401 / 63706 ... creating path file for vertex 4501 / 63706 ... creating path file for vertex 4601 / 63706 ... creating path file for vertex 4701 / 63706 ... creating path file for vertex 4801 / 63706 ... creating path file for vertex 4901 / 63706 ... creating path file for vertex 5001 / 63706 area file for outer ROIs saved at 5001 ... creating path file for vertex 5101 / 63706 ... creating path file for vertex 5201 / 63706 ... creating path file for vertex 5301 / 63706 ... creating path file for vertex 5401 / 63706 ... creating path file for vertex 5501 / 63706 ... creating path file for vertex 5601 / 63706 ... creating path file for vertex 5701 / 63706 ... creating path file for vertex 5801 / 63706 ... creating path file for vertex 5901 / 63706 ... creating path file for vertex 6001 / 63706 ... creating path file for vertex 6101 / 63706 ... creating path file for vertex 6201 / 63706 ... creating path file for vertex 6301 / 63706 ... creating path file for vertex 6401 / 63706 ... creating path file for vertex 6501 / 63706 ... creating path file for vertex 6601 / 63706 ... creating path file for vertex 6701 / 63706 ... creating path file for vertex 6801 / 63706 ... creating path file for vertex 6901 / 63706 ... creating path file for vertex 7001 / 63706 ... creating path file for vertex 7101 / 63706 ... creating path file for vertex 7201 / 63706 ... creating path file for vertex 7301 / 63706 ... creating path file for vertex 7401 / 63706 ... creating path file for vertex 7501 / 63706 ... creating path file for vertex 7601 / 63706 ... creating path file for vertex 7701 / 63706 ... creating path file for vertex 7801 / 63706 ... creating path file for vertex 7901 / 63706 ... creating path file for vertex 8001 / 63706 ... creating path file for vertex 8101 / 63706 ... creating path file for vertex 8201 / 63706 ... creating path file for vertex 8301 / 63706 ... creating path file for vertex 8401 / 63706 ... creating path file for vertex 8501 / 63706 ... creating path file for vertex 8601 / 63706 ... creating path file for vertex 8701 / 63706 ... creating path file for vertex 8801 / 63706 ... creating path file for vertex 8901 / 63706 ... creating path file for vertex 9001 / 63706 ... creating path file for vertex 9101 / 63706 ... creating path file for vertex 9201 / 63706 ... creating path file for vertex 9301 / 63706 ... creating path file for vertex 9401 / 63706 ... creating path file for vertex 9501 / 63706 ... creating path file for vertex 9601 / 63706 ... creating path file for vertex 9701 / 63706 ... creating path file for vertex 9801 / 63706 ... creating path file for vertex 9901 / 63706 ... creating path file for vertex 10001 / 63706 area file for outer ROIs saved at 10001 ... creating path file for vertex 10101 / 63706 ... creating path file for vertex 10201 / 63706 ... creating path file for vertex 10301 / 63706 ... creating path file for vertex 10401 / 63706 ... creating path file for vertex 10501 / 63706 ... creating path file for vertex 10601 / 63706 ... creating path file for vertex 10701 / 63706 ... creating path file for vertex 10801 / 63706 ... creating path file for vertex 10901 / 63706 ... creating path file for vertex 11001 / 63706 ... creating path file for vertex 11101 / 63706 ... creating path file for vertex 11201 / 63706 ... creating path file for vertex 11301 / 63706 ... creating path file for vertex 11401 / 63706 ... creating path file for vertex 11501 / 63706 ... creating path file for vertex 11601 / 63706 ... creating path file for vertex 11701 / 63706 ... creating path file for vertex 11801 / 63706 ... creating path file for vertex 11901 / 63706 ... creating path file for vertex 12001 / 63706 ... creating path file for vertex 12101 / 63706 ... creating path file for vertex 12201 / 63706 ... creating path file for vertex 12301 / 63706 ... creating path file for vertex 12401 / 63706 ... creating path file for vertex 12501 / 63706 ... creating path file for vertex 12601 / 63706 ... creating path file for vertex 12701 / 63706 ... creating path file for vertex 12801 / 63706 ... creating path file for vertex 12901 / 63706 ... creating path file for vertex 13001 / 63706 ... creating path file for vertex 13101 / 63706 ... creating path file for vertex 13201 / 63706 ... creating path file for vertex 13301 / 63706 ... creating path file for vertex 13401 / 63706 ... creating path file for vertex 13501 / 63706 ... creating path file for vertex 13601 / 63706 ... creating path file for vertex 13701 / 63706 ... creating path file for vertex 13801 / 63706 ... creating path file for vertex 13901 / 63706 ... creating path file for vertex 14001 / 63706 ... creating path file for vertex 14101 / 63706 ... creating path file for vertex 14201 / 63706 ... creating path file for vertex 14301 / 63706 ... creating path file for vertex 14401 / 63706 ... creating path file for vertex 14501 / 63706 ... creating path file for vertex 14601 / 63706 ... creating path file for vertex 14701 / 63706 ... creating path file for vertex 14801 / 63706 ... creating path file for vertex 14901 / 63706 ... creating path file for vertex 15001 / 63706 area file for outer ROIs saved at 15001 ... creating path file for vertex 15101 / 63706 ... creating path file for vertex 15201 / 63706 ... creating path file for vertex 15301 / 63706 ... creating path file for vertex 15401 / 63706 ... creating path file for vertex 15501 / 63706 ... creating path file for vertex 15601 / 63706 ... creating path file for vertex 15701 / 63706 ... creating path file for vertex 15801 / 63706 ... creating path file for vertex 15901 / 63706 ... creating path file for vertex 16001 / 63706 ... creating path file for vertex 16101 / 63706 ... creating path file for vertex 16201 / 63706 ... creating path file for vertex 16301 / 63706 ... creating path file for vertex 16401 / 63706 ... creating path file for vertex 16501 / 63706 ... creating path file for vertex 16601 / 63706 ... creating path file for vertex 16701 / 63706 ... creating path file for vertex 16801 / 63706 ... creating path file for vertex 16901 / 63706 ... creating path file for vertex 17001 / 63706 ... creating path file for vertex 17101 / 63706 ... creating path file for vertex 17201 / 63706 ... creating path file for vertex 17301 / 63706 ... creating path file for vertex 17401 / 63706 ... creating path file for vertex 17501 / 63706 ... creating path file for vertex 17601 / 63706 ... creating path file for vertex 17701 / 63706 ... creating path file for vertex 17801 / 63706 ... creating path file for vertex 17901 / 63706 ... creating path file for vertex 18001 / 63706 ... creating path file for vertex 18101 / 63706 ... creating path file for vertex 18201 / 63706 ... creating path file for vertex 18301 / 63706 ... creating path file for vertex 18401 / 63706 ... creating path file for vertex 18501 / 63706 ... creating path file for vertex 18601 / 63706 ... creating path file for vertex 18701 / 63706 ... creating path file for vertex 18801 / 63706 ... creating path file for vertex 18901 / 63706 ... creating path file for vertex 19001 / 63706 ... creating path file for vertex 19101 / 63706 ... creating path file for vertex 19201 / 63706 ... creating path file for vertex 19301 / 63706 ... creating path file for vertex 19401 / 63706 ... creating path file for vertex 19501 / 63706 ... creating path file for vertex 19601 / 63706 ... creating path file for vertex 19701 / 63706 ... creating path file for vertex 19801 / 63706 ... creating path file for vertex 19901 / 63706 ... creating path file for vertex 20001 / 63706 area file for outer ROIs saved at 20001 ... creating path file for vertex 20101 / 63706 ... creating path file for vertex 20201 / 63706 ... creating path file for vertex 20301 / 63706 ... creating path file for vertex 20401 / 63706 ... creating path file for vertex 20501 / 63706 ... creating path file for vertex 20601 / 63706 ... creating path file for vertex 20701 / 63706 ... creating path file for vertex 20801 / 63706 ... creating path file for vertex 20901 / 63706 ... creating path file for vertex 21001 / 63706 ... creating path file for vertex 21101 / 63706 ... creating path file for vertex 21201 / 63706 ... creating path file for vertex 21301 / 63706 ... creating path file for vertex 21401 / 63706 ... creating path file for vertex 21501 / 63706 ... creating path file for vertex 21601 / 63706 ... creating path file for vertex 21701 / 63706 ... creating path file for vertex 21801 / 63706 ... creating path file for vertex 21901 / 63706 ... creating path file for vertex 22001 / 63706 ... creating path file for vertex 22101 / 63706 ... creating path file for vertex 22201 / 63706 ... creating path file for vertex 22301 / 63706 ... creating path file for vertex 22401 / 63706 ... creating path file for vertex 22501 / 63706 ... creating path file for vertex 22601 / 63706 ... creating path file for vertex 22701 / 63706 ... creating path file for vertex 22801 / 63706 ... creating path file for vertex 22901 / 63706 ... creating path file for vertex 23001 / 63706 ... creating path file for vertex 23101 / 63706 ... creating path file for vertex 23201 / 63706 ... creating path file for vertex 23301 / 63706 ... creating path file for vertex 23401 / 63706 ... creating path file for vertex 23501 / 63706 ... creating path file for vertex 23601 / 63706 ... creating path file for vertex 23701 / 63706 ... creating path file for vertex 23801 / 63706 ... creating path file for vertex 23901 / 63706 ... creating path file for vertex 24001 / 63706 ... creating path file for vertex 24101 / 63706 ... creating path file for vertex 24201 / 63706 ... creating path file for vertex 24301 / 63706 ... creating path file for vertex 24401 / 63706 ... creating path file for vertex 24501 / 63706 ... creating path file for vertex 24601 / 63706 ... creating path file for vertex 24701 / 63706 ... creating path file for vertex 24801 / 63706 ... creating path file for vertex 24901 / 63706 ... creating path file for vertex 25001 / 63706 area file for outer ROIs saved at 25001 ... creating path file for vertex 25101 / 63706 ... creating path file for vertex 25201 / 63706 ... creating path file for vertex 25301 / 63706 ... creating path file for vertex 25401 / 63706 ... creating path file for vertex 25501 / 63706 ... creating path file for vertex 25601 / 63706 ... creating path file for vertex 25701 / 63706 ... creating path file for vertex 25801 / 63706 ... creating path file for vertex 25901 / 63706 ... creating path file for vertex 26001 / 63706 ... creating path file for vertex 26101 / 63706 ... creating path file for vertex 26201 / 63706 ... creating path file for vertex 26301 / 63706 ... creating path file for vertex 26401 / 63706 ... creating path file for vertex 26501 / 63706 ... creating path file for vertex 26601 / 63706 ... creating path file for vertex 26701 / 63706 ... creating path file for vertex 26801 / 63706 ... creating path file for vertex 26901 / 63706 ... creating path file for vertex 27001 / 63706 ... creating path file for vertex 27101 / 63706 ... creating path file for vertex 27201 / 63706 ... creating path file for vertex 27301 / 63706 ... creating path file for vertex 27401 / 63706 ... creating path file for vertex 27501 / 63706 ... creating path file for vertex 27601 / 63706 ... creating path file for vertex 27701 / 63706 ... creating path file for vertex 27801 / 63706 ... creating path file for vertex 27901 / 63706 ... creating path file for vertex 28001 / 63706 ... creating path file for vertex 28101 / 63706 ... creating path file for vertex 28201 / 63706 ... creating path file for vertex 28301 / 63706 ... creating path file for vertex 28401 / 63706 ... creating path file for vertex 28501 / 63706 ... creating path file for vertex 28601 / 63706 ... creating path file for vertex 28701 / 63706 ... creating path file for vertex 28801 / 63706 ... creating path file for vertex 28901 / 63706 ... creating path file for vertex 29001 / 63706 ... creating path file for vertex 29101 / 63706 ... creating path file for vertex 29201 / 63706 ... creating path file for vertex 29301 / 63706 ... creating path file for vertex 29401 / 63706 ... creating path file for vertex 29501 / 63706 ... creating path file for vertex 29601 / 63706 ... creating path file for vertex 29701 / 63706 ... creating path file for vertex 29801 / 63706 ... creating path file for vertex 29901 / 63706 ... creating path file for vertex 30001 / 63706 area file for outer ROIs saved at 30001 ... creating path file for vertex 30101 / 63706 ... creating path file for vertex 30201 / 63706 ... creating path file for vertex 30301 / 63706 ... creating path file for vertex 30401 / 63706 ... creating path file for vertex 30501 / 63706 ... creating path file for vertex 30601 / 63706 ... creating path file for vertex 30701 / 63706 ... creating path file for vertex 30801 / 63706 ... creating path file for vertex 30901 / 63706 ... creating path file for vertex 31001 / 63706 ... creating path file for vertex 31101 / 63706 ... creating path file for vertex 31201 / 63706 ... creating path file for vertex 31301 / 63706 ... creating path file for vertex 31401 / 63706 ... creating path file for vertex 31501 / 63706 ... creating path file for vertex 31601 / 63706 ... creating path file for vertex 31701 / 63706 ... creating path file for vertex 31801 / 63706 ... creating path file for vertex 31901 / 63706 ... creating path file for vertex 32001 / 63706 ... creating path file for vertex 32101 / 63706 ... creating path file for vertex 32201 / 63706 ... creating path file for vertex 32301 / 63706 ... creating path file for vertex 32401 / 63706 ... creating path file for vertex 32501 / 63706 ... creating path file for vertex 32601 / 63706 ... creating path file for vertex 32701 / 63706 ... creating path file for vertex 32801 / 63706 ... creating path file for vertex 32901 / 63706 ... creating path file for vertex 33001 / 63706 ... creating path file for vertex 33101 / 63706 ... creating path file for vertex 33201 / 63706 ... creating path file for vertex 33301 / 63706 ... creating path file for vertex 33401 / 63706 ... creating path file for vertex 33501 / 63706 ... creating path file for vertex 33601 / 63706 ... creating path file for vertex 33701 / 63706 ... creating path file for vertex 33801 / 63706 ... creating path file for vertex 33901 / 63706 ... creating path file for vertex 34001 / 63706 ... creating path file for vertex 34101 / 63706 ... creating path file for vertex 34201 / 63706 ... creating path file for vertex 34301 / 63706 ... creating path file for vertex 34401 / 63706 ... creating path file for vertex 34501 / 63706 ... creating path file for vertex 34601 / 63706 ... creating path file for vertex 34701 / 63706 ... creating path file for vertex 34801 / 63706 ... creating path file for vertex 34901 / 63706 ... creating path file for vertex 35001 / 63706 area file for outer ROIs saved at 35001 ... creating path file for vertex 35101 / 63706 ... creating path file for vertex 35201 / 63706 ... creating path file for vertex 35301 / 63706 ... creating path file for vertex 35401 / 63706 ... creating path file for vertex 35501 / 63706 ... creating path file for vertex 35601 / 63706 ... creating path file for vertex 35701 / 63706 ... creating path file for vertex 35801 / 63706 ... creating path file for vertex 35901 / 63706 ... creating path file for vertex 36001 / 63706 ... creating path file for vertex 36101 / 63706 ... creating path file for vertex 36201 / 63706 ... creating path file for vertex 36301 / 63706 ... creating path file for vertex 36401 / 63706 ... creating path file for vertex 36501 / 63706 ... creating path file for vertex 36601 / 63706 ... creating path file for vertex 36701 / 63706 ... creating path file for vertex 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vertex 38901 / 63706 ... creating path file for vertex 39001 / 63706 ... creating path file for vertex 39101 / 63706 ... creating path file for vertex 39201 / 63706 ... creating path file for vertex 39301 / 63706 ... creating path file for vertex 39401 / 63706 ... creating path file for vertex 39501 / 63706 ... creating path file for vertex 39601 / 63706 ... creating path file for vertex 39701 / 63706 ... creating path file for vertex 39801 / 63706 ... creating path file for vertex 39901 / 63706 ... creating path file for vertex 40001 / 63706 area file for outer ROIs saved at 40001 ... creating path file for vertex 40101 / 63706 ... creating path file for vertex 40201 / 63706 ... creating path file for vertex 40301 / 63706 ... creating path file for vertex 40401 / 63706 ... creating path file for vertex 40501 / 63706 ... creating path file for vertex 40601 / 63706 ... creating path file for vertex 40701 / 63706 ... creating path file for vertex 40801 / 63706 ... creating path file for vertex 40901 / 63706 ... creating path file for vertex 41001 / 63706 ... creating path file for vertex 41101 / 63706 ... creating path file for vertex 41201 / 63706 ... creating path file for vertex 41301 / 63706 ... creating path file for vertex 41401 / 63706 ... creating path file for vertex 41501 / 63706 ... creating path file for vertex 41601 / 63706 ... creating path file for vertex 41701 / 63706 ... creating path file for vertex 41801 / 63706 ... creating path file for vertex 41901 / 63706 ... creating path file for vertex 42001 / 63706 ... creating path file for vertex 42101 / 63706 ... creating path file for vertex 42201 / 63706 ... creating path file for vertex 42301 / 63706 ... creating path file for vertex 42401 / 63706 ... creating path file for vertex 42501 / 63706 ... creating path file for vertex 42601 / 63706 ... creating path file for vertex 42701 / 63706 ... creating path file for vertex 42801 / 63706 ... creating path file for vertex 42901 / 63706 ... creating path file for vertex 43001 / 63706 ... creating path file for vertex 43101 / 63706 ... creating path file for vertex 43201 / 63706 ... creating path file for vertex 43301 / 63706 ... creating path file for vertex 43401 / 63706 ... creating path file for vertex 43501 / 63706 ... creating path file for vertex 43601 / 63706 ... creating path file for vertex 43701 / 63706 ... creating path file for vertex 43801 / 63706 ... creating path file for vertex 43901 / 63706 ... creating path file for vertex 44001 / 63706 ... creating path file for vertex 44101 / 63706 ... creating path file for vertex 44201 / 63706 ... creating path file for vertex 44301 / 63706 ... creating path file for vertex 44401 / 63706 ... creating path file for vertex 44501 / 63706 ... creating path file for vertex 44601 / 63706 ... creating path file for vertex 44701 / 63706 ... creating path file for vertex 44801 / 63706 ... creating path file for vertex 44901 / 63706 ... creating path file for vertex 45001 / 63706 area file for outer ROIs saved at 45001 ... creating path file for vertex 45101 / 63706 ... creating path file for vertex 45201 / 63706 ... creating path file for vertex 45301 / 63706 ... creating path file for vertex 45401 / 63706 ... creating path file for vertex 45501 / 63706 ... creating path file for vertex 45601 / 63706 ... creating path file for vertex 45701 / 63706 ... creating path file for vertex 45801 / 63706 ... creating path file for vertex 45901 / 63706 ... creating path file for vertex 46001 / 63706 ... creating path file for vertex 46101 / 63706 ... creating path file for vertex 46201 / 63706 ... creating path file for vertex 46301 / 63706 ... creating path file for vertex 46401 / 63706 ... creating path file for vertex 46501 / 63706 ... creating path file for vertex 46601 / 63706 ... creating path file for vertex 46701 / 63706 ... creating path file for vertex 46801 / 63706 ... creating path file for vertex 46901 / 63706 ... creating path file for vertex 47001 / 63706 ... creating path file for vertex 47101 / 63706 ... creating path file for vertex 47201 / 63706 ... creating path file for vertex 47301 / 63706 ... creating path file for vertex 47401 / 63706 ... creating path file for vertex 47501 / 63706 ... creating path file for vertex 47601 / 63706 ... creating path file for vertex 47701 / 63706 ... creating path file for vertex 47801 / 63706 ... creating path file for vertex 47901 / 63706 ... creating path file for vertex 48001 / 63706 ... creating path file for vertex 48101 / 63706 ... creating path file for vertex 48201 / 63706 ... creating path file for vertex 48301 / 63706 ... creating path file for vertex 48401 / 63706 ... creating path file for vertex 48501 / 63706 ... creating path file for vertex 48601 / 63706 ... creating path file for vertex 48701 / 63706 ... creating path file for vertex 48801 / 63706 ... creating path file for vertex 48901 / 63706 ... creating path file for vertex 49001 / 63706 ... creating path file for vertex 49101 / 63706 ... creating path file for vertex 49201 / 63706 ... creating path file for vertex 49301 / 63706 ... creating path file for vertex 49401 / 63706 ... creating path file for vertex 49501 / 63706 ... creating path file for vertex 49601 / 63706 ... creating path file for vertex 49701 / 63706 ... creating path file for vertex 49801 / 63706 ... creating path file for vertex 49901 / 63706 ... creating path file for vertex 50001 / 63706 area file for outer ROIs saved at 50001 ... creating path file for vertex 50101 / 63706 ... creating path file for vertex 50201 / 63706 ... creating path file for vertex 50301 / 63706 ... creating path file for vertex 50401 / 63706 ... creating path file for vertex 50501 / 63706 ... creating path file for vertex 50601 / 63706 ... creating path file for vertex 50701 / 63706 ... creating path file for vertex 50801 / 63706 ... creating path file for vertex 50901 / 63706 ... creating path file for vertex 51001 / 63706 ... creating path file for vertex 51101 / 63706 ... creating path file for vertex 51201 / 63706 ... creating path file for vertex 51301 / 63706 ... creating path file for vertex 51401 / 63706 ... creating path file for vertex 51501 / 63706 ... creating path file for vertex 51601 / 63706 ... creating path file for vertex 51701 / 63706 ... creating path file for vertex 51801 / 63706 ... creating path file for vertex 51901 / 63706 ... creating path file for vertex 52001 / 63706 ... creating path file for vertex 52101 / 63706 ... creating path file for vertex 52201 / 63706 ... creating path file for vertex 52301 / 63706 ... creating path file for vertex 52401 / 63706 ... creating path file for vertex 52501 / 63706 ... creating path file for vertex 52601 / 63706 ... creating path file for vertex 52701 / 63706 ... creating path file for vertex 52801 / 63706 ... creating path file for vertex 52901 / 63706 ... creating path file for vertex 53001 / 63706 ... creating path file for vertex 53101 / 63706 ... creating path file for vertex 53201 / 63706 ... creating path file for vertex 53301 / 63706 ... creating path file for vertex 53401 / 63706 ... creating path file for vertex 53501 / 63706 ... creating path file for vertex 53601 / 63706 ... creating path file for vertex 53701 / 63706 ... creating path file for vertex 53801 / 63706 ... creating path file for vertex 53901 / 63706 ... creating path file for vertex 54001 / 63706 ... creating path file for vertex 54101 / 63706 ... creating path file for vertex 54201 / 63706 ... creating path file for vertex 54301 / 63706 ... creating path file for vertex 54401 / 63706 ... creating path file for vertex 54501 / 63706 ... creating path file for vertex 54601 / 63706 ... creating path file for vertex 54701 / 63706 ... creating path file for vertex 54801 / 63706 ... creating path file for vertex 54901 / 63706 ... creating path file for vertex 55001 / 63706 area file for outer ROIs saved at 55001 ... creating path file for vertex 55101 / 63706 ... creating path file for vertex 55201 / 63706 ... creating path file for vertex 55301 / 63706 ... creating path file for vertex 55401 / 63706 ... creating path file for vertex 55501 / 63706 ... creating path file for vertex 55601 / 63706 ... creating path file for vertex 55701 / 63706 ... creating path file for vertex 55801 / 63706 ... creating path file for vertex 55901 / 63706 ... creating path file for vertex 56001 / 63706 ... creating path file for vertex 56101 / 63706 ... creating path file for vertex 56201 / 63706 ... creating path file for vertex 56301 / 63706 ... creating path file for vertex 56401 / 63706 ... creating path file for vertex 56501 / 63706 ... creating path file for vertex 56601 / 63706 ... creating path file for vertex 56701 / 63706 ... creating path file for vertex 56801 / 63706 ... creating path file for vertex 56901 / 63706 ... creating path file for vertex 57001 / 63706 ... creating path file for vertex 57101 / 63706 ... creating path file for vertex 57201 / 63706 ... creating path file for vertex 57301 / 63706 ... creating path file for vertex 57401 / 63706 ... creating path file for vertex 57501 / 63706 ... creating path file for vertex 57601 / 63706 ... creating path file for vertex 57701 / 63706 ... creating path file for vertex 57801 / 63706 ... creating path file for vertex 57901 / 63706 ... creating path file for vertex 58001 / 63706 ... creating path file for vertex 58101 / 63706 ... creating path file for vertex 58201 / 63706 ... creating path file for vertex 58301 / 63706 ... creating path file for vertex 58401 / 63706 ... creating path file for vertex 58501 / 63706 ... creating path file for vertex 58601 / 63706 ... creating path file for vertex 58701 / 63706 ... creating path file for vertex 58801 / 63706 ... creating path file for vertex 58901 / 63706 ... creating path file for vertex 59001 / 63706 ... creating path file for vertex 59101 / 63706 ... creating path file for vertex 59201 / 63706 ... creating path file for vertex 59301 / 63706 ... creating path file for vertex 59401 / 63706 ... creating path file for vertex 59501 / 63706 ... creating path file for vertex 59601 / 63706 ... creating path file for vertex 59701 / 63706 ... creating path file for vertex 59801 / 63706 ... creating path file for vertex 59901 / 63706 ... creating path file for vertex 60001 / 63706 area file for outer ROIs saved at 60001 ... creating path file for vertex 60101 / 63706 ... creating path file for vertex 60201 / 63706 ... creating path file for vertex 60301 / 63706 ... creating path file for vertex 60401 / 63706 ... creating path file for vertex 60501 / 63706 ... creating path file for vertex 60601 / 63706 ... creating path file for vertex 60701 / 63706 ... creating path file for vertex 60801 / 63706 ... creating path file for vertex 60901 / 63706 ... creating path file for vertex 61001 / 63706 ... creating path file for vertex 61101 / 63706 ... creating path file for vertex 61201 / 63706 ... creating path file for vertex 61301 / 63706 ... creating path file for vertex 61401 / 63706 ... creating path file for vertex 61501 / 63706 ... creating path file for vertex 61601 / 63706 ... creating path file for vertex 61701 / 63706 ... creating path file for vertex 61801 / 63706 ... creating path file for vertex 61901 / 63706 ... creating path file for vertex 62001 / 63706 ... creating path file for vertex 62101 / 63706 ... creating path file for vertex 62201 / 63706 ... creating path file for vertex 62301 / 63706 ... creating path file for vertex 62401 / 63706 ... creating path file for vertex 62501 / 63706 ... creating path file for vertex 62601 / 63706 ... creating path file for vertex 62701 / 63706 ... creating path file for vertex 62801 / 63706 ... creating path file for vertex 62901 / 63706 ... creating path file for vertex 63001 / 63706 ... creating path file for vertex 63101 / 63706 ... creating path file for vertex 63201 / 63706 ... creating path file for vertex 63301 / 63706 ... creating path file for vertex 63401 / 63706 ... creating path file for vertex 63501 / 63706 ... creating path file for vertex 63601 / 63706 ... creating path file for vertex 63701 / 63706 saving area file in matlab format... DONE. deltaT = 779.4900 ================= mri_path2label --confillxfn rh.pial /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/mri_path2label.input ================= Reading rh.pial Connecting and filling vertices in path at fillseed 153 Finding path...................................................................................................................................................... done Filling 153 nlabel 6783 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.000001.label Connecting and filling vertices in path at fillseed 45 Finding path................................................................................................................................................................. done Filling 45 nlabel 5743 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.000101.label Connecting and filling vertices in path at fillseed 178 Finding path........................................................................................................................................................................................................................................... done Filling 178 nlabel 6660 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.000201.label Connecting and filling vertices in path at fillseed 569 Finding path............................................................................................................................................................................................................................................ done Filling 569 nlabel 8295 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.000301.label Connecting and filling vertices in path at fillseed 470 Finding path...................................................................................................................................................................................................................................................................................................................................................... done Filling 470 nlabel 7461 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.000401.label Connecting and filling vertices in path at fillseed 207 Finding path.................................................................................................................................................................................................... done Filling 207 nlabel 5303 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.000501.label Connecting and filling vertices in path at fillseed 617 Finding path............................................................................................................................................................................................................................................ done Filling 617 nlabel 6456 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.000601.label Connecting and filling vertices in path at fillseed 870 Finding path..................................................................................................................................................................................................... done Filling 870 nlabel 6172 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.000701.label Connecting and filling vertices in path at fillseed 1125 Finding path..................................................................................................................................................................................................... done Filling 1125 nlabel 7106 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.000801.label Connecting and filling vertices in path at fillseed 406 Finding path....................................................................................................................................................................................................................................................................................................... done Filling 406 nlabel 6362 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.000901.label Connecting and filling vertices in path at fillseed 1782 Finding path.............................................................................................................................................................................................................................................. done Filling 1782 nlabel 7560 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.001001.label Connecting and filling vertices in path at fillseed 872 Finding path............................................................................................................................................................................................ done Filling 872 nlabel 6423 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.001101.label Connecting and filling vertices in path at fillseed 1792 Finding path.............................................................................................................................................................................................................................................................................................. done Filling 1792 nlabel 8972 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.001201.label Connecting and filling vertices in path at fillseed 932 Finding path................................................................................................................................................................................................................................................................................................ done Filling 932 nlabel 6503 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.001301.label Connecting and filling vertices in path at fillseed 2170 Finding path................................................................................................................................................................................................................................................................................................................ done Filling 2170 nlabel 8604 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.001401.label Connecting and filling vertices in path at fillseed 1254 Finding path................................................................................................................................................................................................................................................................................................................. done Filling 1254 nlabel 8012 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.001501.label Connecting and filling vertices in path at fillseed 2187 Finding path.................................................................................................................................................................................................................................................................................... done Filling 2187 nlabel 7878 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.001601.label Connecting and filling vertices in path at fillseed 1587 Finding path............................................................................................................................................................................................................................................................................................................ done Filling 1587 nlabel 8826 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.001701.label Connecting and filling vertices in path at fillseed 1616 Finding path........................................................................................................................................................................................................................................................... done Filling 1616 nlabel 6782 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.001801.label Connecting and filling vertices in path at fillseed 3534 Finding path......................................................................................................................................................................................................................................................................... done Filling 3534 nlabel 8210 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.001901.label Connecting and filling vertices in path at fillseed 3455 Finding path........................................................................................................................................................................................................................................................................................................................................ done Filling 3455 nlabel 8578 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.002001.label Connecting and filling vertices in path at fillseed 3847 Finding path..................................................................................................................................................................................................................................................................................... done Filling 3847 nlabel 7355 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.002101.label Connecting and filling vertices in path at fillseed 3487 Finding path..................................................................................................................................................................................................................................................................................................... done Filling 3487 nlabel 9324 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.002201.label Connecting and filling vertices in path at fillseed 3961 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 3961 nlabel 7717 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.002301.label Connecting and filling vertices in path at fillseed 3846 Finding path.................................................................................................................................................................................................................... done Filling 3846 nlabel 6788 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.002401.label Connecting and filling vertices in path at fillseed 2988 Finding path.......................................................................................................................................................................................................................................... done Filling 2988 nlabel 6827 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.002501.label Connecting and filling vertices in path at fillseed 4517 Finding path........................................................................................................................................................................................................................ done Filling 4517 nlabel 6599 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.002601.label Connecting and filling vertices in path at fillseed 2277 Finding path......................................................................................................................................................................................................................................................... done Filling 2277 nlabel 6778 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.002701.label Connecting and filling vertices in path at fillseed 5464 Finding path.................................................................................................................................................................................................................................................................................... done Filling 5464 nlabel 7229 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.002801.label Connecting and filling vertices in path at fillseed 3978 Finding path................................................................................................................................................................................................................................................................................................................................................................... done Filling 3978 nlabel 7023 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.002901.label Connecting and filling vertices in path at fillseed 5117 Finding path............................................................................................................................................................................. done Filling 5117 nlabel 6108 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.003001.label Connecting and filling vertices in path at fillseed 5560 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 5560 nlabel 9539 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.003101.label Connecting and filling vertices in path at fillseed 4045 Finding path....................................................................................................................................................................................................................................................................................................... done Filling 4045 nlabel 7949 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.003201.label Connecting and filling vertices in path at fillseed 4553 Finding path..................................................................................................................................................................................................................................................................................................................................................................... done Filling 4553 nlabel 8557 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.003301.label Connecting and filling vertices in path at fillseed 4970 Finding path............................................................................................................................................................................................................................................................................................................. done Filling 4970 nlabel 7479 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.003401.label Connecting and filling vertices in path at fillseed 6074 Finding path................................................................................................................................................................................................................................................................................................................................. done Filling 6074 nlabel 7147 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.003501.label Connecting and filling vertices in path at fillseed 5876 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 5876 nlabel 8995 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.003601.label Connecting and filling vertices in path at fillseed 5658 Finding path......................................................................................................................................................................................................................................................................... done Filling 5658 nlabel 7462 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.003701.label Connecting and filling vertices in path at fillseed 5443 Finding path.................................................................................................................................................................................................................................................................... done Filling 5443 nlabel 9400 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.003801.label Connecting and filling vertices in path at fillseed 6609 Finding path................................................................................................................................................................................................................................................................................................................ done Filling 6609 nlabel 7661 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.003901.label Connecting and filling vertices in path at fillseed 5756 Finding path......................................................................................................................................................................................................... done Filling 5756 nlabel 6016 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.004001.label Connecting and filling vertices in path at fillseed 6932 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 6932 nlabel 9579 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.004101.label Connecting and filling vertices in path at fillseed 8058 Finding path............................................................................................................................................................................................................................................................................................................................... done Filling 8058 nlabel 8051 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.004201.label Connecting and filling vertices in path at fillseed 5819 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 5819 nlabel 9418 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.004301.label Connecting and filling vertices in path at fillseed 9205 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 9205 nlabel 9261 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.004401.label Connecting and filling vertices in path at fillseed 7157 Finding path........................................................................................................................................................................................................................................................................................................................................................................ done Filling 7157 nlabel 7512 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.004501.label Connecting and filling vertices in path at fillseed 7948 Finding path................................................................................................................................................................................................................................................................................................................... done Filling 7948 nlabel 8443 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.004601.label Connecting and filling vertices in path at fillseed 6691 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 6691 nlabel 10902 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.004701.label Connecting and filling vertices in path at fillseed 9712 Finding path............................................................................................................................................................................................................................................................................................. done Filling 9712 nlabel 9070 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.004801.label Connecting and filling vertices in path at fillseed 7886 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 7886 nlabel 7695 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.004901.label Connecting and filling vertices in path at fillseed 7927 Finding path.......................................................................................................................................................................................................................................................................................................................... done Filling 7927 nlabel 7697 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.005001.label Connecting and filling vertices in path at fillseed 4194 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 4194 nlabel 10731 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.005101.label Connecting and filling vertices in path at fillseed 10418 Finding path............................................................................................................................................................................................................................................................................................................................ done Filling 10418 nlabel 9362 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.005201.label Connecting and filling vertices in path at fillseed 8668 Finding path................................................................................................................................................................................................................................................................................................................................................................................... done Filling 8668 nlabel 7861 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.005301.label Connecting and filling vertices in path at fillseed 7933 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 7933 nlabel 9372 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.005401.label Connecting and filling vertices in path at fillseed 10569 Finding path.................................................................................................................................................................................................................................................................................................. done Filling 10569 nlabel 8835 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.005501.label Connecting and filling vertices in path at fillseed 11981 Finding path..................................................................................................................................................................................................................................................................................................................................................... done Filling 11981 nlabel 7760 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.005601.label Connecting and filling vertices in path at fillseed 9339 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 9339 nlabel 8814 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.005701.label Connecting and filling vertices in path at fillseed 8873 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 8873 nlabel 11737 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.005801.label Connecting and filling vertices in path at fillseed 12548 Finding path.............................................................................................................................................................................................................................................................................................................................................................................. done Filling 12548 nlabel 9736 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.005901.label Connecting and filling vertices in path at fillseed 11958 Finding path................................................................................................................................................................................................................................................................................................. done Filling 11958 nlabel 7566 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.006001.label Connecting and filling vertices in path at fillseed 9332 Finding path........................................................................................................................................................................................................................................................................................................................................................................................... done Filling 9332 nlabel 9784 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.006101.label Connecting and filling vertices in path at fillseed 8432 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 8432 nlabel 10957 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.006201.label Connecting and filling vertices in path at fillseed 10889 Finding path.......................................................................................................................................................................................................................................................................................................................... done Filling 10889 nlabel 7865 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.006301.label Connecting and filling vertices in path at fillseed 11803 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 11803 nlabel 6151 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.006401.label Connecting and filling vertices in path at fillseed 10107 Finding path................................................................................................................................................................................................................................................................................................................................................... done Filling 10107 nlabel 8271 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.006501.label Connecting and filling vertices in path at fillseed 13327 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 13327 nlabel 9128 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.006601.label Connecting and filling vertices in path at fillseed 16362 Finding path.......................................................................................................................................................................................................................................................................................... done Filling 16362 nlabel 7734 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.006701.label Connecting and filling vertices in path at fillseed 12635 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 12635 nlabel 6997 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.006801.label Connecting and filling vertices in path at fillseed 9258 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 9258 nlabel 9015 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.006901.label Connecting and filling vertices in path at fillseed 14182 Finding path......................................................................................................................................................................................................................................................................................................................................................................................... done Filling 14182 nlabel 8526 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.007001.label Connecting and filling vertices in path at fillseed 15280 Finding path.............................................................................................................................................................................................................................................. done Filling 15280 nlabel 7327 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.007101.label Connecting and filling vertices in path at fillseed 13471 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 13471 nlabel 8568 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.007201.label Connecting and filling vertices in path at fillseed 9176 Finding path........................................................................................................................................................................................................................................................................................................................................................................................ done Filling 9176 nlabel 11340 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.007301.label Connecting and filling vertices in path at fillseed 14131 Finding path.................................................................................................................................................................................................................................................................................................................................... done Filling 14131 nlabel 9088 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.007401.label Connecting and filling vertices in path at fillseed 18783 Finding path........................................................................................................................................................................................................................................................................................................................................................................ done Filling 18783 nlabel 9402 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.007501.label Connecting and filling vertices in path at fillseed 13470 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 13470 nlabel 6979 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.007601.label Connecting and filling vertices in path at fillseed 9229 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 9229 nlabel 10555 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.007701.label Connecting and filling vertices in path at fillseed 15068 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 15068 nlabel 9080 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.007801.label Connecting and filling vertices in path at fillseed 17660 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 17660 nlabel 10250 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.007901.label Connecting and filling vertices in path at fillseed 13463 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 13463 nlabel 8915 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.008001.label Connecting and filling vertices in path at fillseed 14287 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 14287 nlabel 11573 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.008101.label Connecting and filling vertices in path at fillseed 15051 Finding path..................................................................................................................................................................................................................................................................................................................................................... done Filling 15051 nlabel 7761 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.008201.label Connecting and filling vertices in path at fillseed 18798 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................. done Filling 18798 nlabel 9244 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.008301.label Connecting and filling vertices in path at fillseed 11770 Finding path................................................................................................................................................................................................................................................................. done Filling 11770 nlabel 8858 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.008401.label Connecting and filling vertices in path at fillseed 14352 Finding path............................................................................................................................................................................................................................................................................................................................................................................................... done Filling 14352 nlabel 8199 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.008501.label Connecting and filling vertices in path at fillseed 15051 Finding path.................................................................................................................................................................................................................................................................................................................................. done Filling 15051 nlabel 7436 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.008601.label Connecting and filling vertices in path at fillseed 16600 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 16600 nlabel 10811 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.008701.label Connecting and filling vertices in path at fillseed 14333 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 14333 nlabel 8667 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.008801.label Connecting and filling vertices in path at fillseed 15178 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 15178 nlabel 10327 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.008901.label Connecting and filling vertices in path at fillseed 17396 Finding path..................................................................................................................................................................................................................................................................................................................................... done Filling 17396 nlabel 8147 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.009001.label Connecting and filling vertices in path at fillseed 17651 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 17651 nlabel 11079 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.009101.label Connecting and filling vertices in path at fillseed 18538 Finding path....................................................................................................................................................................................................................................................................................... done Filling 18538 nlabel 8992 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.009201.label Connecting and filling vertices in path at fillseed 15177 Finding path................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 15177 nlabel 11193 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.009301.label Connecting and filling vertices in path at fillseed 16201 Finding path........................................................................................................................................................................................................................................................................................................................................................................................ done Filling 16201 nlabel 7498 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.009401.label Connecting and filling vertices in path at fillseed 19560 Finding path............................................................................................................................................................................................................................................................................................. done Filling 19560 nlabel 6667 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.009501.label Connecting and filling vertices in path at fillseed 19521 Finding path.......................................................................................................................................................................................................................................................... done Filling 19521 nlabel 8883 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.009601.label Connecting and filling vertices in path at fillseed 15370 Finding path........................................................................................................................................................................................................................................................................................................................................................................... done Filling 15370 nlabel 9090 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.009701.label Connecting and filling vertices in path at fillseed 23746 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 23746 nlabel 8030 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.009801.label Connecting and filling vertices in path at fillseed 18562 Finding path........................................................................................................................................................................................................................................................................................................................................... done Filling 18562 nlabel 7627 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.009901.label Connecting and filling vertices in path at fillseed 18570 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 18570 nlabel 9310 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.010001.label Connecting and filling vertices in path at fillseed 15400 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 15400 nlabel 9514 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.010101.label Connecting and filling vertices in path at fillseed 23694 Finding path................................................................................................................................................................................................................................................................................................................................................................................ done Filling 23694 nlabel 8105 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.010201.label Connecting and filling vertices in path at fillseed 20584 Finding path...................................................................................................................................................................................................................................................................................... done Filling 20584 nlabel 6496 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.010301.label Connecting and filling vertices in path at fillseed 21695 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 21695 nlabel 8979 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.010401.label Connecting and filling vertices in path at fillseed 19340 Finding path................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 19340 nlabel 11025 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.010501.label Connecting and filling vertices in path at fillseed 18173 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 18173 nlabel 9894 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.010601.label Connecting and filling vertices in path at fillseed 24616 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 24616 nlabel 8166 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.010701.label Connecting and filling vertices in path at fillseed 22822 Finding path............................................................................................................................................................................................................................................................................................................................................... done Filling 22822 nlabel 8024 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.010801.label Connecting and filling vertices in path at fillseed 20472 Finding path..................................................................................................................................................................................................................................................................................................................................................................................... done Filling 20472 nlabel 8982 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.010901.label Connecting and filling vertices in path at fillseed 21883 Finding path............................................................................................................................................................................................................................................................................................................................................................ done Filling 21883 nlabel 9084 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.011001.label Connecting and filling vertices in path at fillseed 20515 Finding path.............................................................................................................................................................................................................................................................................................................................................. done Filling 20515 nlabel 5817 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.011101.label Connecting and filling vertices in path at fillseed 29886 Finding path............................................................................................................................................................................................................................. done Filling 29886 nlabel 6283 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.011201.label Connecting and filling vertices in path at fillseed 19613 Finding path....................................................................................................................................................................................................................................................................................................................................................... done Filling 19613 nlabel 9047 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.011301.label Connecting and filling vertices in path at fillseed 25358 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 25358 nlabel 5914 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.011401.label Connecting and filling vertices in path at fillseed 19208 Finding path........................................................................................................................................................................................................................................................................................................................................................................................... done Filling 19208 nlabel 9916 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.011501.label Connecting and filling vertices in path at fillseed 29430 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 29430 nlabel 7582 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.011601.label Connecting and filling vertices in path at fillseed 23011 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 23011 nlabel 9496 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.011701.label Connecting and filling vertices in path at fillseed 24064 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 24064 nlabel 6763 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.011801.label Connecting and filling vertices in path at fillseed 16598 Finding path...................................................................................................................................................................................................................................................................................................................................................................................... done Filling 16598 nlabel 12320 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.011901.label Connecting and filling vertices in path at fillseed 28629 Finding path............................................................................................................................................................................................................................................................................................................................................... done Filling 28629 nlabel 8017 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.012001.label Connecting and filling vertices in path at fillseed 25746 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 25746 nlabel 7695 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.012101.label Connecting and filling vertices in path at fillseed 22967 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 22967 nlabel 9589 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.012201.label Connecting and filling vertices in path at fillseed 21597 Finding path................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 21597 nlabel 8532 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.012301.label Connecting and filling vertices in path at fillseed 21425 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 21425 nlabel 10573 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.012401.label Connecting and filling vertices in path at fillseed 29722 Finding path............................................................................................................................................................................................................................................................................................................................................... done Filling 29722 nlabel 7339 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.012501.label Connecting and filling vertices in path at fillseed 25727 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 25727 nlabel 8497 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.012601.label Connecting and filling vertices in path at fillseed 21755 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 21755 nlabel 8759 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.012701.label Connecting and filling vertices in path at fillseed 22705 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 22705 nlabel 8664 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.012801.label Connecting and filling vertices in path at fillseed 22393 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 22393 nlabel 11628 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.012901.label Connecting and filling vertices in path at fillseed 31104 Finding path............................................................................................................................................................................................................................................................................................................... done Filling 31104 nlabel 5248 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.013001.label Connecting and filling vertices in path at fillseed 29918 Finding path........................................................................................................................................................................................................................................... done Filling 29918 nlabel 6738 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.013101.label Connecting and filling vertices in path at fillseed 27639 Finding path................................................................................................................................................................................................................................................................................................................................... done Filling 27639 nlabel 8090 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.013201.label Connecting and filling vertices in path at fillseed 29976 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 29976 nlabel 6122 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.013301.label Connecting and filling vertices in path at fillseed 30356 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 30356 nlabel 12182 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.013401.label Connecting and filling vertices in path at fillseed 28224 Finding path................................................................................................................................................................................................................................................................................................................................................................. done Filling 28224 nlabel 7750 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.013501.label Connecting and filling vertices in path at fillseed 31144 Finding path....................................................................................................................................................................................................... done Filling 31144 nlabel 7520 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.013601.label Connecting and filling vertices in path at fillseed 26536 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 26536 nlabel 8209 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.013701.label Connecting and filling vertices in path at fillseed 22270 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 22270 nlabel 11228 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.013801.label Connecting and filling vertices in path at fillseed 32304 Finding path...................................................................................................................................................................................................................... done Filling 32304 nlabel 4917 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.013901.label Connecting and filling vertices in path at fillseed 26839 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 26839 nlabel 9178 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.014001.label Connecting and filling vertices in path at fillseed 28901 Finding path.................................................................................................................................................................................................................................................................................................................................................................. done Filling 28901 nlabel 9109 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.014101.label Connecting and filling vertices in path at fillseed 28847 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 28847 nlabel 7177 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.014201.label Connecting and filling vertices in path at fillseed 32882 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 32882 nlabel 11414 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.014301.label Connecting and filling vertices in path at fillseed 30445 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 30445 nlabel 8062 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.014401.label Connecting and filling vertices in path at fillseed 32350 Finding path............................................................................................................................................................................................................................................................................................................................................. done Filling 32350 nlabel 6630 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.014501.label Connecting and filling vertices in path at fillseed 26383 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 26383 nlabel 9129 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.014601.label Connecting and filling vertices in path at fillseed 35342 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 35342 nlabel 11608 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.014701.label Connecting and filling vertices in path at fillseed 33460 Finding path........................................................................................................................................................................................................................................................................................................................................................ done Filling 33460 nlabel 6934 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.014801.label Connecting and filling vertices in path at fillseed 136133 Finding path...................................................................................................................................................................................................................... done Filling 136133 nlabel 7359 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.014901.label Connecting and filling vertices in path at fillseed 35933 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 35933 nlabel 10521 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.015001.label Connecting and filling vertices in path at fillseed 31167 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 31167 nlabel 6322 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.015101.label Connecting and filling vertices in path at fillseed 34316 Finding path.................................................................................................................................................................................................................................................................................................................................................................. done Filling 34316 nlabel 8915 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.015201.label Connecting and filling vertices in path at fillseed 26877 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 26877 nlabel 8454 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.015301.label Connecting and filling vertices in path at fillseed 37242 Finding path................................................................................................................................................................................................................................................................................................................................................... done Filling 37242 nlabel 7790 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.015401.label Connecting and filling vertices in path at fillseed 34690 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 34690 nlabel 10382 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.015501.label Connecting and filling vertices in path at fillseed 33834 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 33834 nlabel 9729 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.015601.label Connecting and filling vertices in path at fillseed 34551 Finding path.................................................................................................................................................................................................................................................................................................................................................................. done Filling 34551 nlabel 8336 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.015701.label Connecting and filling vertices in path at fillseed 37493 Finding path............................................................................................................................................................................................................................................................................................................................................................................ done Filling 37493 nlabel 7968 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.015801.label Connecting and filling vertices in path at fillseed 37225 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 37225 nlabel 10666 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.015901.label Connecting and filling vertices in path at fillseed 34568 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 34568 nlabel 12484 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.016001.label Connecting and filling vertices in path at fillseed 32440 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 32440 nlabel 9182 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.016101.label Connecting and filling vertices in path at fillseed 37770 Finding path................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 37770 nlabel 7238 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.016201.label Connecting and filling vertices in path at fillseed 136192 Finding path................................................................................................................................................................................................................................................................................................................................ done Filling 136192 nlabel 8370 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.016301.label Connecting and filling vertices in path at fillseed 37144 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 37144 nlabel 10928 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.016401.label Connecting and filling vertices in path at fillseed 32390 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 32390 nlabel 6496 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.016501.label Connecting and filling vertices in path at fillseed 39484 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 39484 nlabel 7143 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.016601.label Connecting and filling vertices in path at fillseed 40497 Finding path...................................................................................................................................................................................................................................................................... done Filling 40497 nlabel 7356 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.016701.label Connecting and filling vertices in path at fillseed 32384 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 32384 nlabel 8059 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.016801.label Connecting and filling vertices in path at fillseed 35883 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 35883 nlabel 10585 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.016901.label Connecting and filling vertices in path at fillseed 38077 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 38077 nlabel 11283 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.017001.label Connecting and filling vertices in path at fillseed 39468 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 39468 nlabel 9590 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.017101.label Connecting and filling vertices in path at fillseed 37272 Finding path................................................................................................................................................................................................................................................................ done Filling 37272 nlabel 7233 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.017201.label Connecting and filling vertices in path at fillseed 41894 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 41894 nlabel 10543 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.017301.label Connecting and filling vertices in path at fillseed 36966 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 36966 nlabel 10190 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.017401.label Connecting and filling vertices in path at fillseed 36301 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 36301 nlabel 12231 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.017501.label Connecting and filling vertices in path at fillseed 37192 Finding path........................................................................................................................................................................................................ done Filling 37192 nlabel 5522 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.017601.label Connecting and filling vertices in path at fillseed 41913 Finding path................................................................................................................................................................................................................................................................................................. done Filling 41913 nlabel 7327 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.017701.label Connecting and filling vertices in path at fillseed 38434 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 38434 nlabel 10332 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.017801.label Connecting and filling vertices in path at fillseed 36028 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 36028 nlabel 6224 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.017901.label Connecting and filling vertices in path at fillseed 41156 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 41156 nlabel 10378 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.018001.label Connecting and filling vertices in path at fillseed 43554 Finding path............................................................................................................................................................................................................................................................. done Filling 43554 nlabel 7150 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.018101.label Connecting and filling vertices in path at fillseed 40267 Finding path.............................................................................................................................................................................................................................................................................................................................................................................. done Filling 40267 nlabel 9041 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.018201.label Connecting and filling vertices in path at fillseed 44648 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 44648 nlabel 4586 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.018301.label Connecting and filling vertices in path at fillseed 41174 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 41174 nlabel 10441 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.018401.label Connecting and filling vertices in path at fillseed 44913 Finding path...................................................................................................................................................................................................................................................................................................... done Filling 44913 nlabel 8144 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.018501.label Connecting and filling vertices in path at fillseed 45899 Finding path..................................................................................................................................................................................................................................................................................................................................................... done Filling 45899 nlabel 9320 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.018601.label Connecting and filling vertices in path at fillseed 45830 Finding path..................................................................................................................................................................................................................................................................................................................................................................................... done Filling 45830 nlabel 4837 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.018701.label Connecting and filling vertices in path at fillseed 41441 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 41441 nlabel 7765 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.018801.label Connecting and filling vertices in path at fillseed 37605 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 37605 nlabel 9992 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.018901.label Connecting and filling vertices in path at fillseed 41004 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 41004 nlabel 8910 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.019001.label Connecting and filling vertices in path at fillseed 44823 Finding path.................................................................................................................................................................................................................................................................................................................................................................................. done Filling 44823 nlabel 7826 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.019101.label Connecting and filling vertices in path at fillseed 45805 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 45805 nlabel 9354 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.019201.label Connecting and filling vertices in path at fillseed 44581 Finding path................................................................................................................................................................................................................................................................. done Filling 44581 nlabel 5143 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.019301.label Connecting and filling vertices in path at fillseed 37621 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 37621 nlabel 13131 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.019401.label Connecting and filling vertices in path at fillseed 40759 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 40759 nlabel 6525 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.019501.label Connecting and filling vertices in path at fillseed 47076 Finding path........................................................................................................................................................................................................... done Filling 47076 nlabel 6720 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.019601.label Connecting and filling vertices in path at fillseed 49635 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 49635 nlabel 8078 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.019701.label Connecting and filling vertices in path at fillseed 45811 Finding path..................................................................................................................................................................................................................................................................... done Filling 45811 nlabel 4456 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.019801.label Connecting and filling vertices in path at fillseed 40418 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 40418 nlabel 7740 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.019901.label Connecting and filling vertices in path at fillseed 42591 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 42591 nlabel 8931 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.020001.label Connecting and filling vertices in path at fillseed 46154 Finding path............................................................................................................................................................................................................................................................................................................................................................................................ done Filling 46154 nlabel 8792 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.020101.label Connecting and filling vertices in path at fillseed 50965 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 50965 nlabel 7842 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.020201.label Connecting and filling vertices in path at fillseed 45810 Finding path............................................................................................................................................................................................................................................................................................... done Filling 45810 nlabel 6228 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.020301.label Connecting and filling vertices in path at fillseed 41042 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 41042 nlabel 11373 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.020401.label Connecting and filling vertices in path at fillseed 42607 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 42607 nlabel 8663 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.020501.label Connecting and filling vertices in path at fillseed 46190 Finding path.................................................................................................................................................................................................................................................................................................................................................................................. done Filling 46190 nlabel 8825 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.020601.label Connecting and filling vertices in path at fillseed 45872 Finding path.......................................................................................................................................................................................................................................................................................................................... done Filling 45872 nlabel 9015 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.020701.label Connecting and filling vertices in path at fillseed 48421 Finding path............................................................................................................................................................................................................................................................................................................. done Filling 48421 nlabel 5803 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.020801.label Connecting and filling vertices in path at fillseed 48809 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 48809 nlabel 9944 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.020901.label Connecting and filling vertices in path at fillseed 46772 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 46772 nlabel 7106 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.021001.label Connecting and filling vertices in path at fillseed 48836 Finding path..................................................................................................................................................................................................................................................................................................................................................................................... done Filling 48836 nlabel 8784 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.021101.label Connecting and filling vertices in path at fillseed 47396 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 47396 nlabel 8289 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.021201.label Connecting and filling vertices in path at fillseed 44589 Finding path.......................................................................................................................................................................................................................................................................................................... done Filling 44589 nlabel 8231 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.021301.label Connecting and filling vertices in path at fillseed 46736 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 46736 nlabel 9447 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.021401.label Connecting and filling vertices in path at fillseed 49003 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 49003 nlabel 11886 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.021501.label Connecting and filling vertices in path at fillseed 46810 Finding path............................................................................................................................................................................................................................................................................................................................. done Filling 46810 nlabel 7151 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.021601.label Connecting and filling vertices in path at fillseed 46191 Finding path.............................................................................................................................................................................................................................................................................................................. done Filling 46191 nlabel 9439 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.021701.label Connecting and filling vertices in path at fillseed 50954 Finding path.............................................................................................................................................................................................................................................................................................................................................................. done Filling 50954 nlabel 9471 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.021801.label Connecting and filling vertices in path at fillseed 49650 Finding path............................................................................................................................................................................................................................................................................................................. done Filling 49650 nlabel 6470 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.021901.label Connecting and filling vertices in path at fillseed 49167 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 49167 nlabel 8139 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.022001.label Connecting and filling vertices in path at fillseed 46794 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 46794 nlabel 6672 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.022101.label Connecting and filling vertices in path at fillseed 49584 Finding path.................................................................................................................................................................................................. done Filling 49584 nlabel 5215 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.022201.label Connecting and filling vertices in path at fillseed 55346 Finding path........................................................................................................................................... done Filling 55346 nlabel 5417 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.022301.label Connecting and filling vertices in path at fillseed 50793 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................... done Filling 50793 nlabel 9697 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.022401.label Connecting and filling vertices in path at fillseed 47259 Finding path............................................................................................................................................................................................................................................... done Filling 47259 nlabel 5286 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.022501.label Connecting and filling vertices in path at fillseed 53363 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 53363 nlabel 6966 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.022601.label Connecting and filling vertices in path at fillseed 51261 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 51261 nlabel 8554 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.022701.label Connecting and filling vertices in path at fillseed 56942 Finding path.............................................................................................................................................. done Filling 56942 nlabel 5875 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.022801.label Connecting and filling vertices in path at fillseed 58478 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 58478 nlabel 10051 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.022901.label Connecting and filling vertices in path at fillseed 51830 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 51830 nlabel 9074 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.023001.label Connecting and filling vertices in path at fillseed 51294 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 51294 nlabel 9823 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.023101.label Connecting and filling vertices in path at fillseed 50768 Finding path......................................................................................................................................................................................................................................................................................................................................... done Filling 50768 nlabel 7769 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.023201.label Connecting and filling vertices in path at fillseed 51125 Finding path.......................................................................................................................................................................................................................................................................................................................................... done Filling 51125 nlabel 9338 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.023301.label Connecting and filling vertices in path at fillseed 61631 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 61631 nlabel 8118 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.023401.label Connecting and filling vertices in path at fillseed 51985 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 51985 nlabel 10172 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.023501.label Connecting and filling vertices in path at fillseed 49916 Finding path............................................................................................................................................................................................................................................................................................................... done Filling 49916 nlabel 8247 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.023601.label Connecting and filling vertices in path at fillseed 53031 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 53031 nlabel 7225 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.023701.label Connecting and filling vertices in path at fillseed 57295 Finding path............................................................................................................................................................................................................................................................................................................................................ done Filling 57295 nlabel 7155 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.023801.label Connecting and filling vertices in path at fillseed 55378 Finding path.......................................................................................................................... done Filling 55378 nlabel 5272 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.023901.label Connecting and filling vertices in path at fillseed 49670 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 49670 nlabel 9974 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.024001.label Connecting and filling vertices in path at fillseed 53690 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 53690 nlabel 9903 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.024101.label Connecting and filling vertices in path at fillseed 55516 Finding path................................................................................................................................................................................................................................................................................... done Filling 55516 nlabel 6676 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.024201.label Connecting and filling vertices in path at fillseed 57841 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 57841 nlabel 9488 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.024301.label Connecting and filling vertices in path at fillseed 62982 Finding path.............................................................................................................................................................................................................................................................................................................................................................................. done Filling 62982 nlabel 6224 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.024401.label Connecting and filling vertices in path at fillseed 60093 Finding path.......................................................................................................................... done Filling 60093 nlabel 4607 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.024501.label Connecting and filling vertices in path at fillseed 51018 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 51018 nlabel 11046 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.024601.label Connecting and filling vertices in path at fillseed 55126 Finding path.......................................................................................................................................................................................................................................................................................................................................................... done Filling 55126 nlabel 9733 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.024701.label Connecting and filling vertices in path at fillseed 55516 Finding path................................................................................................................................................................................................................................................................................................ done Filling 55516 nlabel 6288 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.024801.label Connecting and filling vertices in path at fillseed 61057 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 61057 nlabel 9384 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.024901.label Connecting and filling vertices in path at fillseed 62982 Finding path............................................................................................................................................................................................................................................................................................ done Filling 62982 nlabel 6612 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.025001.label Connecting and filling vertices in path at fillseed 53951 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 53951 nlabel 10398 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.025101.label Connecting and filling vertices in path at fillseed 60060 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 60060 nlabel 8779 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.025201.label Connecting and filling vertices in path at fillseed 59877 Finding path............................................................................................................................................................................................................................................................................................................................................................. done Filling 59877 nlabel 9051 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.025301.label Connecting and filling vertices in path at fillseed 56508 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 56508 nlabel 10239 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.025401.label Connecting and filling vertices in path at fillseed 57990 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 57990 nlabel 9521 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.025501.label Connecting and filling vertices in path at fillseed 51160 Finding path.............................................................................................................................................................................................................................. done Filling 51160 nlabel 7500 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.025601.label Connecting and filling vertices in path at fillseed 54897 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 54897 nlabel 8148 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.025701.label Connecting and filling vertices in path at fillseed 64658 Finding path....................................................................................................................................................................................................................... done Filling 64658 nlabel 5591 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.025801.label Connecting and filling vertices in path at fillseed 64896 Finding path......................................................................................................................................................... done Filling 64896 nlabel 4380 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.025901.label Connecting and filling vertices in path at fillseed 63232 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 63232 nlabel 8775 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.026001.label Connecting and filling vertices in path at fillseed 61091 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 61091 nlabel 6812 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.026101.label Connecting and filling vertices in path at fillseed 60239 Finding path.......................................................................................................................................................................................................................................... done Filling 60239 nlabel 7272 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.026201.label Connecting and filling vertices in path at fillseed 56015 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 56015 nlabel 7006 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.026301.label Connecting and filling vertices in path at fillseed 64907 Finding path......................................................................................................................................... done Filling 64907 nlabel 4456 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.026401.label Connecting and filling vertices in path at fillseed 68153 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 68153 nlabel 8394 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.026501.label Connecting and filling vertices in path at fillseed 60116 Finding path............................................................................................................................................................................................................................................................................................................................. done Filling 60116 nlabel 6464 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.026601.label Connecting and filling vertices in path at fillseed 55842 Finding path.............................................................................................................................................. done Filling 55842 nlabel 7098 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.026701.label Connecting and filling vertices in path at fillseed 64643 Finding path................................................................................................................................................................................. done Filling 64643 nlabel 5707 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.026801.label Connecting and filling vertices in path at fillseed 63263 Finding path.......................................................................................................................................................... done Filling 63263 nlabel 4185 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.026901.label Connecting and filling vertices in path at fillseed 71194 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 71194 nlabel 4600 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.027001.label Connecting and filling vertices in path at fillseed 60110 Finding path...................................................................................................................................................................................................................................................................................................................................................................................... done Filling 60110 nlabel 7266 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.027101.label Connecting and filling vertices in path at fillseed 62859 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 62859 nlabel 8587 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.027201.label Connecting and filling vertices in path at fillseed 62570 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 62570 nlabel 10135 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.027301.label Connecting and filling vertices in path at fillseed 65332 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 65332 nlabel 8046 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.027401.label Connecting and filling vertices in path at fillseed 60137 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 60137 nlabel 11774 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.027501.label Connecting and filling vertices in path at fillseed 64831 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 64831 nlabel 8670 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.027601.label Connecting and filling vertices in path at fillseed 64473 Finding path.................................................................................................................................................................................................................................................................................................................................................................... done Filling 64473 nlabel 8267 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.027701.label Connecting and filling vertices in path at fillseed 65536 Finding path.............................................................................................................................................................................. done Filling 65536 nlabel 7121 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.027801.label Connecting and filling vertices in path at fillseed 65487 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 65487 nlabel 7693 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.027901.label Connecting and filling vertices in path at fillseed 68179 Finding path................................................................................................................... done Filling 68179 nlabel 4247 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.028001.label Connecting and filling vertices in path at fillseed 69697 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 69697 nlabel 8799 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.028101.label Connecting and filling vertices in path at fillseed 66168 Finding path............................................................................................................................................................................................................................................................................................................................................................................. done Filling 66168 nlabel 7984 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.028201.label Connecting and filling vertices in path at fillseed 64021 Finding path................................................................................................................................................................................................................................................................................................................................... done Filling 64021 nlabel 5779 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.028301.label Connecting and filling vertices in path at fillseed 63812 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 63812 nlabel 6145 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.028401.label Connecting and filling vertices in path at fillseed 60396 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 60396 nlabel 6930 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.028501.label Connecting and filling vertices in path at fillseed 63337 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 63337 nlabel 9189 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.028601.label Connecting and filling vertices in path at fillseed 66255 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 66255 nlabel 9507 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.028701.label Connecting and filling vertices in path at fillseed 65184 Finding path......................................................................................................................................... done Filling 65184 nlabel 7052 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.028801.label Connecting and filling vertices in path at fillseed 67797 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 67797 nlabel 7201 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.028901.label Connecting and filling vertices in path at fillseed 60444 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 60444 nlabel 6641 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.029001.label Connecting and filling vertices in path at fillseed 75699 Finding path................................................................................................................................................................................................................................................................................................................................................................. done Filling 75699 nlabel 3575 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.029101.label Connecting and filling vertices in path at fillseed 64694 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 64694 nlabel 9123 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.029201.label Connecting and filling vertices in path at fillseed 67411 Finding path................................................................................................................................................................................................................................. done Filling 67411 nlabel 4755 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.029301.label Connecting and filling vertices in path at fillseed 70514 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 70514 nlabel 9660 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.029401.label Connecting and filling vertices in path at fillseed 68091 Finding path................................................................................................................................................................................................................................................ done Filling 68091 nlabel 5273 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.029501.label Connecting and filling vertices in path at fillseed 64969 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 64969 nlabel 9128 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.029601.label Connecting and filling vertices in path at fillseed 68017 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 68017 nlabel 9263 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.029701.label Connecting and filling vertices in path at fillseed 69130 Finding path.......................................................................................................................................................................................................................................................................................................................... done Filling 69130 nlabel 7698 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.029801.label Connecting and filling vertices in path at fillseed 67713 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 67713 nlabel 10961 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.029901.label Connecting and filling vertices in path at fillseed 68077 Finding path............................................................................................................................................................................................... done Filling 68077 nlabel 4842 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.030001.label Connecting and filling vertices in path at fillseed 66693 Finding path......................................................................................................................................................................................................................................................................................................................................................................... done Filling 66693 nlabel 8887 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.030101.label Connecting and filling vertices in path at fillseed 77022 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 77022 nlabel 8139 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.030201.label Connecting and filling vertices in path at fillseed 70466 Finding path................................................................................................................................................................................................................................................. done Filling 70466 nlabel 4736 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.030301.label Connecting and filling vertices in path at fillseed 71802 Finding path..................................................................................................................................................................... done Filling 71802 nlabel 7345 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.030401.label Connecting and filling vertices in path at fillseed 67261 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 67261 nlabel 8703 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.030501.label Connecting and filling vertices in path at fillseed 68369 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 68369 nlabel 6642 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.030601.label Connecting and filling vertices in path at fillseed 69764 Finding path........................................................................................................................................................................................................................................................................................ done Filling 69764 nlabel 7785 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.030701.label Connecting and filling vertices in path at fillseed 69786 Finding path................................................................................................................................................................................................................................................................................. done Filling 69786 nlabel 7747 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.030801.label Connecting and filling vertices in path at fillseed 71894 Finding path........................................................................................................................................................................... done Filling 71894 nlabel 6169 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.030901.label Connecting and filling vertices in path at fillseed 69445 Finding path......................................................................................................................................................................... done Filling 69445 nlabel 5182 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.031001.label Connecting and filling vertices in path at fillseed 69943 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 69943 nlabel 8031 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.031101.label Connecting and filling vertices in path at fillseed 71294 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 71294 nlabel 7681 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.031201.label Connecting and filling vertices in path at fillseed 71246 Finding path........................................................................................................................................................................................................................................................................... done Filling 71246 nlabel 7160 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.031301.label Connecting and filling vertices in path at fillseed 69918 Finding path................................................................................................................................................................................................................ done Filling 69918 nlabel 7620 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.031401.label Connecting and filling vertices in path at fillseed 72358 Finding path............................................................................................................................................................................ done Filling 72358 nlabel 5178 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.031501.label Connecting and filling vertices in path at fillseed 70109 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 70109 nlabel 6812 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.031601.label Connecting and filling vertices in path at fillseed 77057 Finding path................................................................................................................. done Filling 77057 nlabel 4108 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.031701.label Connecting and filling vertices in path at fillseed 72540 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 72540 nlabel 8563 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.031801.label Connecting and filling vertices in path at fillseed 76583 Finding path................................................................................................................................................................................................................................................................................................................................ done Filling 76583 nlabel 6874 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.031901.label Connecting and filling vertices in path at fillseed 75123 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 75123 nlabel 13458 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.032001.label Connecting and filling vertices in path at fillseed 78868 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 78868 nlabel 8092 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.032101.label Connecting and filling vertices in path at fillseed 75664 Finding path................................................................................................................................................ done Filling 75664 nlabel 4070 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.032201.label Connecting and filling vertices in path at fillseed 72746 Finding path................................................................................................................................................................................................................................................................................................................................................................... done Filling 72746 nlabel 7139 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.032301.label Connecting and filling vertices in path at fillseed 75751 Finding path............................................................................................................................................................................................................................................................... done Filling 75751 nlabel 7174 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.032401.label Connecting and filling vertices in path at fillseed 76499 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 76499 nlabel 13005 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.032501.label Connecting and filling vertices in path at fillseed 76259 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 76259 nlabel 7518 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.032601.label Connecting and filling vertices in path at fillseed 78593 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 78593 nlabel 10232 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.032701.label Connecting and filling vertices in path at fillseed 81066 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 81066 nlabel 2766 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.032801.label Connecting and filling vertices in path at fillseed 78471 Finding path............................................................................................................................................................................................................................................................................ done Filling 78471 nlabel 6911 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.032901.label Connecting and filling vertices in path at fillseed 77614 Finding path............................................................................................................................................................................................................................... done Filling 77614 nlabel 6759 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.033001.label Connecting and filling vertices in path at fillseed 75351 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 75351 nlabel 13141 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.033101.label Connecting and filling vertices in path at fillseed 73048 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 73048 nlabel 8018 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.033201.label Connecting and filling vertices in path at fillseed 75722 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 75722 nlabel 11175 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.033301.label Connecting and filling vertices in path at fillseed 74063 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 74063 nlabel 8735 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.033401.label Connecting and filling vertices in path at fillseed 81177 Finding path................................................................................................................................................................................ done Filling 81177 nlabel 7244 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.033501.label Connecting and filling vertices in path at fillseed 83165 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 83165 nlabel 13746 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.033601.label Connecting and filling vertices in path at fillseed 76949 Finding path............................................................................................................................. done Filling 76949 nlabel 3786 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.033701.label Connecting and filling vertices in path at fillseed 78435 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 78435 nlabel 4356 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.033801.label Connecting and filling vertices in path at fillseed 79756 Finding path.............................................................................................................................................................................................................................................................................................................................................................................. done Filling 79756 nlabel 8176 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.033901.label Connecting and filling vertices in path at fillseed 81668 Finding path........................................................................................................................................................................... done Filling 81668 nlabel 6442 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.034001.label Connecting and filling vertices in path at fillseed 77850 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 77850 nlabel 13588 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.034101.label Connecting and filling vertices in path at fillseed 80054 Finding path..................................................................................................................................................................................................................................................................................................................................................................................... done Filling 80054 nlabel 7984 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.034201.label Connecting and filling vertices in path at fillseed 79734 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 79734 nlabel 4083 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.034301.label Connecting and filling vertices in path at fillseed 136567 Finding path.................................................................................................................................................................................................................................................................................................................................................................................. done Filling 136567 nlabel 8482 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.034401.label Connecting and filling vertices in path at fillseed 79941 Finding path.................................................................................................................................................................................................... done Filling 79941 nlabel 6883 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.034501.label Connecting and filling vertices in path at fillseed 85766 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 85766 nlabel 9085 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.034601.label Connecting and filling vertices in path at fillseed 80916 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 80916 nlabel 4120 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.034701.label Connecting and filling vertices in path at fillseed 87834 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 87834 nlabel 4214 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.034801.label Connecting and filling vertices in path at fillseed 82444 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 82444 nlabel 9893 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.034901.label Connecting and filling vertices in path at fillseed 84631 Finding path................................................................................................. done Filling 84631 nlabel 4554 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.035001.label Connecting and filling vertices in path at fillseed 86126 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 86126 nlabel 14237 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.035101.label Connecting and filling vertices in path at fillseed 84105 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 84105 nlabel 9271 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.035201.label Connecting and filling vertices in path at fillseed 79794 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 79794 nlabel 11853 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.035301.label Connecting and filling vertices in path at fillseed 82404 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 82404 nlabel 6161 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.035401.label Connecting and filling vertices in path at fillseed 91532 Finding path................................................................................................................................................................................................................................................................................................................................... done Filling 91532 nlabel 8082 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.035501.label Connecting and filling vertices in path at fillseed 84681 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 84681 nlabel 4835 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.035601.label Connecting and filling vertices in path at fillseed 85888 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 85888 nlabel 13698 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.035701.label Connecting and filling vertices in path at fillseed 82294 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 82294 nlabel 4653 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.035801.label Connecting and filling vertices in path at fillseed 79770 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 79770 nlabel 11923 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.035901.label Connecting and filling vertices in path at fillseed 93842 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 93842 nlabel 8618 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.036001.label Connecting and filling vertices in path at fillseed 85189 Finding path..................................................................................................................................................................................................................................... done Filling 85189 nlabel 7542 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.036101.label Connecting and filling vertices in path at fillseed 84663 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 84663 nlabel 14001 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.036201.label Connecting and filling vertices in path at fillseed 86358 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 86358 nlabel 11209 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.036301.label Connecting and filling vertices in path at fillseed 86749 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 86749 nlabel 11055 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.036401.label Connecting and filling vertices in path at fillseed 82427 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 82427 nlabel 5235 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.036501.label Connecting and filling vertices in path at fillseed 136583 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 136583 nlabel 8199 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.036601.label Connecting and filling vertices in path at fillseed 89833 Finding path............................................................................................................................................................................................................................. done Filling 89833 nlabel 5267 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.036701.label Connecting and filling vertices in path at fillseed 89677 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 89677 nlabel 7116 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.036801.label Connecting and filling vertices in path at fillseed 85133 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 85133 nlabel 3268 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.036901.label Connecting and filling vertices in path at fillseed 85152 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 85152 nlabel 6420 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.037001.label Connecting and filling vertices in path at fillseed 136579 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 136579 nlabel 6330 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.037101.label Connecting and filling vertices in path at fillseed 89833 Finding path.................................................................................................................................................................................................................................. done Filling 89833 nlabel 4675 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.037201.label Connecting and filling vertices in path at fillseed 89693 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 89693 nlabel 6100 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.037301.label Connecting and filling vertices in path at fillseed 85491 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 85491 nlabel 9255 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.037401.label Connecting and filling vertices in path at fillseed 90521 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 90521 nlabel 3387 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.037501.label Connecting and filling vertices in path at fillseed 92627 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 92627 nlabel 6325 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.037601.label Connecting and filling vertices in path at fillseed 89961 Finding path............................................................................................................................................................................. done Filling 89961 nlabel 5609 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.037701.label Connecting and filling vertices in path at fillseed 90923 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 90923 nlabel 8439 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.037801.label Connecting and filling vertices in path at fillseed 89381 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 89381 nlabel 10828 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.037901.label Connecting and filling vertices in path at fillseed 87813 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 87813 nlabel 6479 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.038001.label Connecting and filling vertices in path at fillseed 96155 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 96155 nlabel 5997 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.038101.label Connecting and filling vertices in path at fillseed 90810 Finding path....................................................................................................................................................................... done Filling 90810 nlabel 5840 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.038201.label Connecting and filling vertices in path at fillseed 89963 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 89963 nlabel 14301 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.038301.label Connecting and filling vertices in path at fillseed 93006 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 93006 nlabel 10804 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.038401.label Connecting and filling vertices in path at fillseed 91706 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 91706 nlabel 4679 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.038501.label Connecting and filling vertices in path at fillseed 90550 Finding path.............................................................................................................................................................................................................................................................................................................................. done Filling 90550 nlabel 6366 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.038601.label Connecting and filling vertices in path at fillseed 93339 Finding path................................................................................................................................................................................................. done Filling 93339 nlabel 6450 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.038701.label Connecting and filling vertices in path at fillseed 88619 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 88619 nlabel 13722 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.038801.label Connecting and filling vertices in path at fillseed 86928 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 86928 nlabel 8299 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.038901.label Connecting and filling vertices in path at fillseed 90565 Finding path......................................................................................................................................................................................................................................................................................................................................................................... done Filling 90565 nlabel 12551 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.039001.label Connecting and filling vertices in path at fillseed 90549 Finding path................................................................................................................................................................................................................................................................................................................................................................... done Filling 90549 nlabel 5877 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.039101.label Connecting and filling vertices in path at fillseed 95490 Finding path............................................................................................................................................................................................... done Filling 95490 nlabel 5995 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.039201.label Connecting and filling vertices in path at fillseed 98167 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 98167 nlabel 14181 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.039301.label Connecting and filling vertices in path at fillseed 94129 Finding path........................................................................................................................................................................................................................................................................................................................................................................................... done Filling 94129 nlabel 10865 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.039401.label Connecting and filling vertices in path at fillseed 92812 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 92812 nlabel 5356 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.039501.label Connecting and filling vertices in path at fillseed 91738 Finding path....................................................................................................................................................................................................................................................................................................................................................................................... done Filling 91738 nlabel 6046 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.039601.label Connecting and filling vertices in path at fillseed 96485 Finding path........................................................................................................................................................................................................................................................ done Filling 96485 nlabel 6235 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.039701.label Connecting and filling vertices in path at fillseed 92526 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 92526 nlabel 13680 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.039801.label Connecting and filling vertices in path at fillseed 95068 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 95068 nlabel 5346 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.039901.label Connecting and filling vertices in path at fillseed 92806 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 92806 nlabel 5038 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.040001.label Connecting and filling vertices in path at fillseed 90544 Finding path....................................................................................................................................................................................................................................................................................................................................................................... done Filling 90544 nlabel 9088 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.040101.label Connecting and filling vertices in path at fillseed 93967 Finding path.............................................................................................................................................................................................................................................................................. done Filling 93967 nlabel 5771 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.040201.label Connecting and filling vertices in path at fillseed 95889 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 95889 nlabel 14496 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.040301.label Connecting and filling vertices in path at fillseed 95026 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 95026 nlabel 6172 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.040401.label Connecting and filling vertices in path at fillseed 95179 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 95179 nlabel 12767 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.040501.label Connecting and filling vertices in path at fillseed 92823 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 92823 nlabel 7736 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.040601.label Connecting and filling vertices in path at fillseed 98260 Finding path............................................................................................................................... done Filling 98260 nlabel 4379 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.040701.label Connecting and filling vertices in path at fillseed 93636 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 93636 nlabel 13766 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.040801.label Connecting and filling vertices in path at fillseed 96622 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 96622 nlabel 9301 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.040901.label Connecting and filling vertices in path at fillseed 92817 Finding path................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 92817 nlabel 5989 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.041001.label Connecting and filling vertices in path at fillseed 100809 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 100809 nlabel 5839 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.041101.label Connecting and filling vertices in path at fillseed 97676 Finding path................................................................................................................................................................................................................................................................... done Filling 97676 nlabel 6234 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.041201.label Connecting and filling vertices in path at fillseed 95553 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 95553 nlabel 9624 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.041301.label Connecting and filling vertices in path at fillseed 96504 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 96504 nlabel 11320 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.041401.label Connecting and filling vertices in path at fillseed 93954 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 93954 nlabel 11058 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.041501.label Connecting and filling vertices in path at fillseed 98451 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 98451 nlabel 6339 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.041601.label Connecting and filling vertices in path at fillseed 100371 Finding path.......................................................................................................................................................... done Filling 100371 nlabel 4601 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.041701.label Connecting and filling vertices in path at fillseed 96757 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 96757 nlabel 8030 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.041801.label Connecting and filling vertices in path at fillseed 96293 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 96293 nlabel 5859 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.041901.label Connecting and filling vertices in path at fillseed 95158 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 95158 nlabel 11113 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.042001.label Connecting and filling vertices in path at fillseed 101694 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 101694 nlabel 6382 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.042101.label Connecting and filling vertices in path at fillseed 100396 Finding path...................................................................................................................... done Filling 100396 nlabel 4621 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.042201.label Connecting and filling vertices in path at fillseed 97232 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 97232 nlabel 13844 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.042301.label Connecting and filling vertices in path at fillseed 98880 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 98880 nlabel 12984 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.042401.label Connecting and filling vertices in path at fillseed 96342 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 96342 nlabel 11113 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.042501.label Connecting and filling vertices in path at fillseed 102723 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 102723 nlabel 5815 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.042601.label Connecting and filling vertices in path at fillseed 98773 Finding path............................................................................................................................................................................................................................................................................................. done Filling 98773 nlabel 5808 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.042701.label Connecting and filling vertices in path at fillseed 98298 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 98298 nlabel 15174 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.042801.label Connecting and filling vertices in path at fillseed 98659 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 98659 nlabel 6504 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.042901.label Connecting and filling vertices in path at fillseed 98756 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 98756 nlabel 12016 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.043001.label Connecting and filling vertices in path at fillseed 97569 Finding path........................................................................................................................................................................................................................................................................................................... done Filling 97569 nlabel 5416 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.043101.label Connecting and filling vertices in path at fillseed 99880 Finding path................................................................................................................................................................................................................................................................................................... done Filling 99880 nlabel 5722 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.043201.label Connecting and filling vertices in path at fillseed 98398 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 98398 nlabel 14061 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.043301.label Connecting and filling vertices in path at fillseed 100004 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 100004 nlabel 8845 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.043401.label Connecting and filling vertices in path at fillseed 96321 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 96321 nlabel 5521 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.043501.label Connecting and filling vertices in path at fillseed 96369 Finding path....................................................................................................................................................................................................................................................................................................................................................... done Filling 96369 nlabel 9961 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.043601.label Connecting and filling vertices in path at fillseed 103423 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 103423 nlabel 4406 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.043701.label Connecting and filling vertices in path at fillseed 103286 Finding path...................................................................................................................................... done Filling 103286 nlabel 4744 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.043801.label Connecting and filling vertices in path at fillseed 103035 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 103035 nlabel 8588 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.043901.label Connecting and filling vertices in path at fillseed 98639 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 98639 nlabel 7078 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.044001.label Connecting and filling vertices in path at fillseed 99896 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 99896 nlabel 10842 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.044101.label Connecting and filling vertices in path at fillseed 136726 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 136726 nlabel 5184 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.044201.label Connecting and filling vertices in path at fillseed 100930 Finding path................................................................................................................................................................................................................................. done Filling 100930 nlabel 5908 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.044301.label Connecting and filling vertices in path at fillseed 105964 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 105964 nlabel 15379 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.044401.label Connecting and filling vertices in path at fillseed 102969 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 102969 nlabel 10026 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.044501.label Connecting and filling vertices in path at fillseed 99793 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 99793 nlabel 6279 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.044601.label Connecting and filling vertices in path at fillseed 93930 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 93930 nlabel 6890 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.044701.label Connecting and filling vertices in path at fillseed 106968 Finding path.................................................................................................................................................................................................... done Filling 106968 nlabel 3818 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.044801.label Connecting and filling vertices in path at fillseed 105973 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 105973 nlabel 15527 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.044901.label Connecting and filling vertices in path at fillseed 100652 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 100652 nlabel 11545 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.045001.label Connecting and filling vertices in path at fillseed 101883 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 101883 nlabel 11942 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.045101.label Connecting and filling vertices in path at fillseed 100830 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 100830 nlabel 6911 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.045201.label Connecting and filling vertices in path at fillseed 107166 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 107166 nlabel 6619 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.045301.label Connecting and filling vertices in path at fillseed 106388 Finding path................................................................................................................................................................................. done Filling 106388 nlabel 5767 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.045401.label Connecting and filling vertices in path at fillseed 106025 Finding path........................................................................................................................................................................... done Filling 106025 nlabel 4190 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.045501.label Connecting and filling vertices in path at fillseed 101638 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 101638 nlabel 11689 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.045601.label Connecting and filling vertices in path at fillseed 108074 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 108074 nlabel 6538 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.045701.label Connecting and filling vertices in path at fillseed 104573 Finding path....................................................................................................................................................................... done Filling 104573 nlabel 5091 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.045801.label Connecting and filling vertices in path at fillseed 103670 Finding path.................................................................................................................................................................... done Filling 103670 nlabel 5490 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.045901.label Connecting and filling vertices in path at fillseed 103946 Finding path........................................................................................................................................................................................................................................................................................................................................................ done Filling 103946 nlabel 7848 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.046001.label Connecting and filling vertices in path at fillseed 107094 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 107094 nlabel 6590 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.046101.label Connecting and filling vertices in path at fillseed 106342 Finding path........................................................................................................................................................................................................................................................................................................................................................................ done Filling 106342 nlabel 7008 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.046201.label Connecting and filling vertices in path at fillseed 108834 Finding path............................................................................................................................................ done Filling 108834 nlabel 4441 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.046301.label Connecting and filling vertices in path at fillseed 109762 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 109762 nlabel 13616 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.046401.label Connecting and filling vertices in path at fillseed 111810 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 111810 nlabel 8189 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.046501.label Connecting and filling vertices in path at fillseed 108150 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 108150 nlabel 9635 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.046601.label Connecting and filling vertices in path at fillseed 107358 Finding path.............................................................................................................................................................. done Filling 107358 nlabel 5536 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.046701.label Connecting and filling vertices in path at fillseed 109574 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 109574 nlabel 15388 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.046801.label Connecting and filling vertices in path at fillseed 104815 Finding path......................................................................................................................................................................................................................................................................................................................................................................................... done Filling 104815 nlabel 8868 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.046901.label Connecting and filling vertices in path at fillseed 111032 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 111032 nlabel 11875 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.047001.label Connecting and filling vertices in path at fillseed 109068 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 109068 nlabel 5075 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.047101.label Connecting and filling vertices in path at fillseed 108938 Finding path.................................................................................................................................. done Filling 108938 nlabel 5048 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.047201.label Connecting and filling vertices in path at fillseed 106654 Finding path....................................................................................................................................................................................................................................................................................................................................................................................... done Filling 106654 nlabel 8213 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.047301.label Connecting and filling vertices in path at fillseed 116138 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 116138 nlabel 6938 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.047401.label Connecting and filling vertices in path at fillseed 109091 Finding path....................................................................................................................................................................................................................................... done Filling 109091 nlabel 6084 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.047501.label Connecting and filling vertices in path at fillseed 111574 Finding path........................................................................................................................................... done Filling 111574 nlabel 4676 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.047601.label Connecting and filling vertices in path at fillseed 107572 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 107572 nlabel 10080 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.047701.label Connecting and filling vertices in path at fillseed 111117 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 111117 nlabel 10964 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.047801.label Connecting and filling vertices in path at fillseed 110919 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 110919 nlabel 7301 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.047901.label Connecting and filling vertices in path at fillseed 110758 Finding path.................................................................................................................................................... done Filling 110758 nlabel 4780 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.048001.label Connecting and filling vertices in path at fillseed 110913 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 110913 nlabel 4830 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.048101.label Connecting and filling vertices in path at fillseed 114376 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 114376 nlabel 11830 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.048201.label Connecting and filling vertices in path at fillseed 111005 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 111005 nlabel 9578 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.048301.label Connecting and filling vertices in path at fillseed 110066 Finding path....................................................................................................................................................................................................................................................... done Filling 110066 nlabel 6798 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.048401.label Connecting and filling vertices in path at fillseed 111856 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 111856 nlabel 5309 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.048501.label Connecting and filling vertices in path at fillseed 114352 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 114352 nlabel 11705 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.048601.label Connecting and filling vertices in path at fillseed 117038 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 117038 nlabel 6831 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.048701.label Connecting and filling vertices in path at fillseed 110945 Finding path.................................................................................................................................................................................................................................. done Filling 110945 nlabel 7022 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.048801.label Connecting and filling vertices in path at fillseed 112780 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 112780 nlabel 5176 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.048901.label Connecting and filling vertices in path at fillseed 113219 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 113219 nlabel 12566 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.049001.label Connecting and filling vertices in path at fillseed 110281 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 110281 nlabel 11399 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.049101.label Connecting and filling vertices in path at fillseed 111837 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 111837 nlabel 5922 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.049201.label Connecting and filling vertices in path at fillseed 114467 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 114467 nlabel 4635 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.049301.label Connecting and filling vertices in path at fillseed 113736 Finding path.............................................................................................................................. done Filling 113736 nlabel 4703 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.049401.label Connecting and filling vertices in path at fillseed 116065 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 116065 nlabel 9106 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.049501.label Connecting and filling vertices in path at fillseed 111161 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 111161 nlabel 12725 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.049601.label Connecting and filling vertices in path at fillseed 111920 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 111920 nlabel 8731 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.049701.label Connecting and filling vertices in path at fillseed 116077 Finding path.............................................................................................................................................. done Filling 116077 nlabel 5569 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.049801.label Connecting and filling vertices in path at fillseed 114975 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 114975 nlabel 12120 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.049901.label Connecting and filling vertices in path at fillseed 115261 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 115261 nlabel 7889 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.050001.label Connecting and filling vertices in path at fillseed 116182 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 116182 nlabel 7054 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.050101.label Connecting and filling vertices in path at fillseed 116643 Finding path............................................................................................................................... done Filling 116643 nlabel 5336 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.050201.label Connecting and filling vertices in path at fillseed 116602 Finding path.......................................................................................................................... done Filling 116602 nlabel 5295 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.050301.label Connecting and filling vertices in path at fillseed 117256 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 117256 nlabel 9930 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.050401.label Connecting and filling vertices in path at fillseed 121455 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 121455 nlabel 6372 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.050501.label Connecting and filling vertices in path at fillseed 114508 Finding path..................................................................................................................................................................................................................... done Filling 114508 nlabel 5046 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.050601.label Connecting and filling vertices in path at fillseed 115695 Finding path.................................................................................................................................... done Filling 115695 nlabel 5324 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.050701.label Connecting and filling vertices in path at fillseed 119068 Finding path........................................................................................................................................................................................................................................................................................................................................................................................ done Filling 119068 nlabel 8979 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.050801.label Connecting and filling vertices in path at fillseed 113716 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 113716 nlabel 8787 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.050901.label Connecting and filling vertices in path at fillseed 119729 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 119729 nlabel 4073 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.051001.label Connecting and filling vertices in path at fillseed 117359 Finding path............................................................................................................................. done Filling 117359 nlabel 5148 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.051101.label Connecting and filling vertices in path at fillseed 120015 Finding path............................................................................................................................................................................................................................................................................................................................................................... done Filling 120015 nlabel 8563 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.051201.label Connecting and filling vertices in path at fillseed 122986 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 122986 nlabel 6434 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.051301.label Connecting and filling vertices in path at fillseed 115357 Finding path................................................................................................................................................................................................................................................. done Filling 115357 nlabel 6286 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.051401.label Connecting and filling vertices in path at fillseed 118925 Finding path............................................................................................................. done Filling 118925 nlabel 5153 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.051501.label Connecting and filling vertices in path at fillseed 116899 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 116899 nlabel 6823 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.051601.label Connecting and filling vertices in path at fillseed 122993 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 122993 nlabel 6112 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.051701.label Connecting and filling vertices in path at fillseed 121515 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 121515 nlabel 3594 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.051801.label Connecting and filling vertices in path at fillseed 117397 Finding path.................................................................................................................... done Filling 117397 nlabel 5265 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.051901.label Connecting and filling vertices in path at fillseed 119604 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 119604 nlabel 7125 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.052001.label Connecting and filling vertices in path at fillseed 117110 Finding path................................................................................................................................................................................... done Filling 117110 nlabel 7434 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.052101.label Connecting and filling vertices in path at fillseed 117810 Finding path..................................................................................................................................................... done Filling 117810 nlabel 4698 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.052201.label Connecting and filling vertices in path at fillseed 119389 Finding path............................................................................................................ done Filling 119389 nlabel 5137 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.052301.label Connecting and filling vertices in path at fillseed 119889 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 119889 nlabel 9949 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.052401.label Connecting and filling vertices in path at fillseed 123000 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 123000 nlabel 6368 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.052501.label Connecting and filling vertices in path at fillseed 119741 Finding path.......................................................................................................................................................................................................................................................................................... done Filling 119741 nlabel 5386 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.052601.label Connecting and filling vertices in path at fillseed 119256 Finding path......................................................................................................... done Filling 119256 nlabel 5114 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.052701.label Connecting and filling vertices in path at fillseed 120510 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 120510 nlabel 7050 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.052801.label Connecting and filling vertices in path at fillseed 119749 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 119749 nlabel 8622 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.052901.label Connecting and filling vertices in path at fillseed 120625 Finding path........................................................................................................................... done Filling 120625 nlabel 5168 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.053001.label Connecting and filling vertices in path at fillseed 123487 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 123487 nlabel 12493 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.053101.label Connecting and filling vertices in path at fillseed 118908 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 118908 nlabel 9835 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.053201.label Connecting and filling vertices in path at fillseed 123767 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 123767 nlabel 6168 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.053301.label Connecting and filling vertices in path at fillseed 123629 Finding path....................................................................................................................................................................................... done Filling 123629 nlabel 4645 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.053401.label Connecting and filling vertices in path at fillseed 121232 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 121232 nlabel 9068 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.053501.label Connecting and filling vertices in path at fillseed 119821 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 119821 nlabel 10410 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.053601.label Connecting and filling vertices in path at fillseed 123804 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 123804 nlabel 5556 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.053701.label Connecting and filling vertices in path at fillseed 121140 Finding path........................................................................................................................... done Filling 121140 nlabel 5018 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.053801.label Connecting and filling vertices in path at fillseed 124196 Finding path.................................................................................................................................................................................................................................. done Filling 124196 nlabel 8399 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.053901.label Connecting and filling vertices in path at fillseed 119813 Finding path.......................................................................................................................................................................................................................................................................................................................................... done Filling 119813 nlabel 9372 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.054001.label Connecting and filling vertices in path at fillseed 124571 Finding path...................................................................................................................................................... done Filling 124571 nlabel 4517 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.054101.label Connecting and filling vertices in path at fillseed 121693 Finding path......................................................................................................................... done Filling 121693 nlabel 4848 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.054201.label Connecting and filling vertices in path at fillseed 121188 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 121188 nlabel 8411 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.054301.label Connecting and filling vertices in path at fillseed 124495 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 124495 nlabel 7233 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.054401.label Connecting and filling vertices in path at fillseed 122294 Finding path...................................................................................................................................................................................................................................................... done Filling 122294 nlabel 6323 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.054501.label Connecting and filling vertices in path at fillseed 126751 Finding path........................................................................................................................... done Filling 126751 nlabel 5327 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.054601.label Connecting and filling vertices in path at fillseed 124215 Finding path........................................................................................................................................................................................................................................................ done Filling 124215 nlabel 8199 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.054701.label Connecting and filling vertices in path at fillseed 122419 Finding path............................................................................................................................................................................................................................................................................................................................... done Filling 122419 nlabel 9485 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.054801.label Connecting and filling vertices in path at fillseed 126086 Finding path.................................................................................................................................................... done Filling 126086 nlabel 4824 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.054901.label Connecting and filling vertices in path at fillseed 128059 Finding path........................................................................................................................ done Filling 128059 nlabel 5574 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.055001.label Connecting and filling vertices in path at fillseed 124180 Finding path................................................................................................................................................................................................................................................................................................................................... done Filling 124180 nlabel 8189 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.055101.label Connecting and filling vertices in path at fillseed 124034 Finding path.......................................................................................................................................................................................................................................................................................................................................................... done Filling 124034 nlabel 9405 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.055201.label Connecting and filling vertices in path at fillseed 122314 Finding path................................................................................................................................................ done Filling 122314 nlabel 5549 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.055301.label Connecting and filling vertices in path at fillseed 128131 Finding path.................................................................................................. done Filling 128131 nlabel 5077 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.055401.label Connecting and filling vertices in path at fillseed 123099 Finding path........................................................................................................................................................................................................................................................... done Filling 123099 nlabel 5065 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.055501.label Connecting and filling vertices in path at fillseed 125238 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 125238 nlabel 8125 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.055601.label Connecting and filling vertices in path at fillseed 123847 Finding path............................................................................................................................................................................................................................................................................................................................................................... done Filling 123847 nlabel 6532 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.055701.label Connecting and filling vertices in path at fillseed 128498 Finding path................................................................................................................................. done Filling 128498 nlabel 4917 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.055801.label Connecting and filling vertices in path at fillseed 123874 Finding path............................................................................................................................................................................................................... done Filling 123874 nlabel 5808 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.055901.label Connecting and filling vertices in path at fillseed 125214 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 125214 nlabel 6949 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.056001.label Connecting and filling vertices in path at fillseed 125352 Finding path.................................................................................................................................................................................................................................................. done Filling 125352 nlabel 6239 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.056101.label Connecting and filling vertices in path at fillseed 123828 Finding path....................................................................................................................................................................... done Filling 123828 nlabel 5821 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.056201.label Connecting and filling vertices in path at fillseed 123862 Finding path........................................................................................................................................................................................ done Filling 123862 nlabel 5431 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.056301.label Connecting and filling vertices in path at fillseed 129872 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 129872 nlabel 7111 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.056401.label Connecting and filling vertices in path at fillseed 124789 Finding path........................................................................................................................................................................................................................................................................................................................................... done Filling 124789 nlabel 9869 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.056501.label Connecting and filling vertices in path at fillseed 126099 Finding path......................................................................................................................................................................................................................................................... done Filling 126099 nlabel 6284 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.056601.label Connecting and filling vertices in path at fillseed 130176 Finding path........................................................................................................................... done Filling 130176 nlabel 4856 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.056701.label Connecting and filling vertices in path at fillseed 130613 Finding path........................................................................................................................................................................................ done Filling 130613 nlabel 5410 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.056801.label Connecting and filling vertices in path at fillseed 124708 Finding path.............................................................................................................................................................................................................................................................................. done Filling 124708 nlabel 9256 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.056901.label Connecting and filling vertices in path at fillseed 128537 Finding path........................................................................................................................................... done Filling 128537 nlabel 3979 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.057001.label Connecting and filling vertices in path at fillseed 129593 Finding path............................................................................................................................................................................................................ done Filling 129593 nlabel 5447 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.057101.label Connecting and filling vertices in path at fillseed 127999 Finding path............................................................................................................................................................................................................................................................................................................................................ done Filling 127999 nlabel 7885 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.057201.label Connecting and filling vertices in path at fillseed 126915 Finding path.................................................................................................................................................................................................................. done Filling 126915 nlabel 6868 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.057301.label Connecting and filling vertices in path at fillseed 128564 Finding path............................................................................................................................................................................................................. done Filling 128564 nlabel 4841 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.057401.label Connecting and filling vertices in path at fillseed 131263 Finding path............................................................................................................................................................................................ done Filling 131263 nlabel 6039 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.057501.label Connecting and filling vertices in path at fillseed 128685 Finding path.................................................................................................................................................................................................................................................................................................... done Filling 128685 nlabel 9657 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.057601.label Connecting and filling vertices in path at fillseed 129422 Finding path............................................................................................................................ done Filling 129422 nlabel 4209 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.057701.label Connecting and filling vertices in path at fillseed 129068 Finding path................................................................................................. done Filling 129068 nlabel 5292 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.057801.label Connecting and filling vertices in path at fillseed 129964 Finding path...................................................................................................................................................................... done Filling 129964 nlabel 5848 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.057901.label Connecting and filling vertices in path at fillseed 128638 Finding path..................................................................................................................................................................................................................................................................... done Filling 128638 nlabel 8558 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.058001.label Connecting and filling vertices in path at fillseed 128569 Finding path........................................................................................................................................................................................ done Filling 128569 nlabel 5698 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.058101.label Connecting and filling vertices in path at fillseed 132691 Finding path...................................................................................................................................................................... done Filling 132691 nlabel 5251 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.058201.label Connecting and filling vertices in path at fillseed 130467 Finding path................................................................................................................................................................................................................ done Filling 130467 nlabel 7760 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.058301.label Connecting and filling vertices in path at fillseed 130149 Finding path................................................................................................................................................................ done Filling 130149 nlabel 4966 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.058401.label Connecting and filling vertices in path at fillseed 128567 Finding path...................................................................................................................................................................................... done Filling 128567 nlabel 5914 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.058501.label Connecting and filling vertices in path at fillseed 131444 Finding path....................................................................................................................................... done Filling 131444 nlabel 5004 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.058601.label Connecting and filling vertices in path at fillseed 130689 Finding path....................................................................................................................................................................... done Filling 130689 nlabel 5870 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.058701.label Connecting and filling vertices in path at fillseed 129537 Finding path....................................................................................................................................................................................................... done Filling 129537 nlabel 7011 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.058801.label Connecting and filling vertices in path at fillseed 129454 Finding path................................................................................................................................................................................................... done Filling 129454 nlabel 5476 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.058901.label Connecting and filling vertices in path at fillseed 133064 Finding path............................................................................................................................................................................................................................................... done Filling 133064 nlabel 5155 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.059001.label Connecting and filling vertices in path at fillseed 130691 Finding path............................................................................................................................. done Filling 130691 nlabel 5968 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.059101.label Connecting and filling vertices in path at fillseed 130836 Finding path..................................................................................................................................................................... done Filling 130836 nlabel 4255 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.059201.label Connecting and filling vertices in path at fillseed 131513 Finding path............................................................................................................................................................................................. done Filling 131513 nlabel 6046 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.059301.label Connecting and filling vertices in path at fillseed 132492 Finding path...................................................................................................................................................................... done Filling 132492 nlabel 4350 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.059401.label Connecting and filling vertices in path at fillseed 130634 Finding path....................................................................................................................................................................................... done Filling 130634 nlabel 6509 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.059501.label Connecting and filling vertices in path at fillseed 132389 Finding path.............................................................................................................................................................................. done Filling 132389 nlabel 5196 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.059601.label Connecting and filling vertices in path at fillseed 131990 Finding path.................................................................................................................................................................................................................................. done Filling 131990 nlabel 6849 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.059701.label Connecting and filling vertices in path at fillseed 131493 Finding path................................................................................................................................................................................ done Filling 131493 nlabel 4082 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.059801.label Connecting and filling vertices in path at fillseed 131750 Finding path............................................................................................................................................................................................ done Filling 131750 nlabel 8084 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.059901.label Connecting and filling vertices in path at fillseed 133442 Finding path..................................................................................................................................................................... done Filling 133442 nlabel 5637 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.060001.label Connecting and filling vertices in path at fillseed 131999 Finding path.................................................................................................................................................................................... done Filling 131999 nlabel 5895 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.060101.label Connecting and filling vertices in path at fillseed 134219 Finding path.......................................................................................................................................................................................................................... done Filling 134219 nlabel 5343 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.060201.label Connecting and filling vertices in path at fillseed 132370 Finding path...................................................................................................................................................... done Filling 132370 nlabel 5925 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.060301.label Connecting and filling vertices in path at fillseed 131997 Finding path................................................................................................................................................................................................. done Filling 131997 nlabel 6923 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.060401.label Connecting and filling vertices in path at fillseed 133473 Finding path................................................................................................................................. done Filling 133473 nlabel 4646 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.060501.label Connecting and filling vertices in path at fillseed 132749 Finding path................................................................................................................................................................................................................. done Filling 132749 nlabel 7276 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.060601.label Connecting and filling vertices in path at fillseed 133973 Finding path............................................................................................................................................................................... done Filling 133973 nlabel 4764 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.060701.label Connecting and filling vertices in path at fillseed 132012 Finding path.................................................................................................................................................................... done Filling 132012 nlabel 4099 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.060801.label Connecting and filling vertices in path at fillseed 133703 Finding path................................................................................................................................................................................................ done Filling 133703 nlabel 7133 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.060901.label Connecting and filling vertices in path at fillseed 134455 Finding path............................................................................................................................................................ done Filling 134455 nlabel 5279 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.061001.label Connecting and filling vertices in path at fillseed 132958 Finding path................................................................................................................................................................................................. done Filling 132958 nlabel 5169 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.061101.label Connecting and filling vertices in path at fillseed 134957 Finding path....................................................................................................................................................................................................................... done Filling 134957 nlabel 4988 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.061201.label Connecting and filling vertices in path at fillseed 133422 Finding path........................................................................................................................................................ done Filling 133422 nlabel 5941 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.061301.label Connecting and filling vertices in path at fillseed 134471 Finding path................................................................................................................................................................................. done Filling 134471 nlabel 4736 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.061401.label Connecting and filling vertices in path at fillseed 135452 Finding path................................................................................................................................................. done Filling 135452 nlabel 5158 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.061501.label Connecting and filling vertices in path at fillseed 134760 Finding path........................................................................................................................................................................ done Filling 134760 nlabel 5939 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.061601.label Connecting and filling vertices in path at fillseed 135214 Finding path............................................................................................................................................................................. done Filling 135214 nlabel 6585 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.061701.label Connecting and filling vertices in path at fillseed 134522 Finding path........................................................................................................................................................................... done Filling 134522 nlabel 5339 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.061801.label Connecting and filling vertices in path at fillseed 135314 Finding path............................................................................................................................................................................................................................. done Filling 135314 nlabel 5616 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.061901.label Connecting and filling vertices in path at fillseed 135535 Finding path........................................................................................................................................................................................................... done Filling 135535 nlabel 5951 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.062001.label Connecting and filling vertices in path at fillseed 134491 Finding path.......................................................................................................................... done Filling 134491 nlabel 4236 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.062101.label Connecting and filling vertices in path at fillseed 134931 Finding path.................................................................................................................................................................................................................................. done Filling 134931 nlabel 4880 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.062201.label Connecting and filling vertices in path at fillseed 135339 Finding path..................................................................................................................................................................................................... done Filling 135339 nlabel 4771 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.062301.label Connecting and filling vertices in path at fillseed 135568 Finding path................................................................................................................................................................................ done Filling 135568 nlabel 5294 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.062401.label Connecting and filling vertices in path at fillseed 134863 Finding path............................................................................................................................................. done Filling 134863 nlabel 4359 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.062501.label Connecting and filling vertices in path at fillseed 135213 Finding path.......................................................................................................................................................................................................................... done Filling 135213 nlabel 4441 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.062601.label Connecting and filling vertices in path at fillseed 134835 Finding path......................................................................................................................................................... done Filling 134835 nlabel 5160 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.062701.label Connecting and filling vertices in path at fillseed 135481 Finding path.......................................................................................................................................................................................... done Filling 135481 nlabel 6136 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.062801.label Connecting and filling vertices in path at fillseed 135243 Finding path........................................................................................................................................................................................................ done Filling 135243 nlabel 4753 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.062901.label Connecting and filling vertices in path at fillseed 135700 Finding path....................................................................................................................................................................................................................................... done Filling 135700 nlabel 5629 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.063001.label Connecting and filling vertices in path at fillseed 135894 Finding path............................................................................................................................................................................... done Filling 135894 nlabel 5702 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.063101.label Connecting and filling vertices in path at fillseed 135648 Finding path............................................................................................................................................. done Filling 135648 nlabel 5446 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.063201.label Connecting and filling vertices in path at fillseed 135764 Finding path.................................................................................................................................................................................................... done Filling 135764 nlabel 5557 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.063301.label Connecting and filling vertices in path at fillseed 135520 Finding path............................................................................................................................................................................................. done Filling 135520 nlabel 6105 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.063401.label Connecting and filling vertices in path at fillseed 135587 Finding path.......................................................................................................................................................................................................... done Filling 135587 nlabel 5019 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.063501.label Connecting and filling vertices in path at fillseed 135996 Finding path.................................................................................................................................................................................... done Filling 135996 nlabel 5709 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.063601.label Connecting and filling vertices in path at fillseed 135990 Finding path................................................................................................................................................ done Filling 135990 nlabel 4390 Saving label file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.063701.label ================= compute_lgi('rh.pial','rh.pial-outer-smoothed','/home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial-outer-smoothed-normals.asc',100,25,'/home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial'); exit ================= < M A T L A B (R) > Copyright 1984-2018 The MathWorks, Inc. R2018b (9.5.0.944444) 64-bit (glnxa64) August 28, 2018 For online documentation, see https://www.mathworks.com/support For product information, visit www.mathworks.com. >> loading datas ... FREESURFER_READ_SURF [v 1.2 ] ...reading surface file: rh.pial ...reading triangle file ...adding 1 to face indices for matlab compatibility. ...done ( 0.02 sec) FREESURFER_READ_SURF [v 1.2 ] ...reading surface file: rh.pial-outer-smoothed ...reading triangle file ...adding 1 to face indices for matlab compatibility. ...done ( 0.01 sec) preparing outer mesh structure ... face 5000 / 127408 face 10000 / 127408 face 15000 / 127408 face 20000 / 127408 face 25000 / 127408 face 30000 / 127408 face 35000 / 127408 face 40000 / 127408 face 45000 / 127408 face 50000 / 127408 face 55000 / 127408 face 60000 / 127408 face 65000 / 127408 face 70000 / 127408 face 75000 / 127408 face 80000 / 127408 face 85000 / 127408 face 90000 / 127408 face 95000 / 127408 face 100000 / 127408 face 105000 / 127408 face 110000 / 127408 face 115000 / 127408 face 120000 / 127408 face 125000 / 127408 reading normals info ... mesh_outer = struct with fields: vertices: [63706x3 double] faces: [127408x3 double] facesOfVertex: [63706x1 struct] vertexNormal: [63706x3 double] preparing pial mesh structure ... face 5000 / 273520 face 10000 / 273520 face 15000 / 273520 face 20000 / 273520 face 25000 / 273520 face 30000 / 273520 face 35000 / 273520 face 40000 / 273520 face 45000 / 273520 face 50000 / 273520 face 55000 / 273520 face 60000 / 273520 face 65000 / 273520 face 70000 / 273520 face 75000 / 273520 face 80000 / 273520 face 85000 / 273520 face 90000 / 273520 face 95000 / 273520 face 100000 / 273520 face 105000 / 273520 face 110000 / 273520 face 115000 / 273520 face 120000 / 273520 face 125000 / 273520 face 130000 / 273520 face 135000 / 273520 face 140000 / 273520 face 145000 / 273520 face 150000 / 273520 face 155000 / 273520 face 160000 / 273520 face 165000 / 273520 face 170000 / 273520 face 175000 / 273520 face 180000 / 273520 face 185000 / 273520 face 190000 / 273520 face 195000 / 273520 face 200000 / 273520 face 205000 / 273520 face 210000 / 273520 face 215000 / 273520 face 220000 / 273520 face 225000 / 273520 face 230000 / 273520 face 235000 / 273520 face 240000 / 273520 face 245000 / 273520 face 250000 / 273520 face 255000 / 273520 face 260000 / 273520 face 265000 / 273520 face 270000 / 273520 mesh_total = struct with fields: vertices: [136762x3 double] faces: [273520x3 double] facesOfVertex: [136762x1 struct] ...searching for mesh edges...done (62.26 sec). loading outer area information... lGI for vertex number 1 of the outer mesh is 2.5473 ratio saved at 1 lGI for vertex number 101 of the outer mesh is 2.2696 lGI for vertex number 201 of the outer mesh is 2.6948 lGI for vertex number 301 of the outer mesh is 2.9764 lGI for vertex number 401 of the outer mesh is 2.6919 lGI for vertex number 501 of the outer mesh is 2.3502 lGI for vertex number 601 of the outer mesh is 2.5879 lGI for vertex number 701 of the outer mesh is 2.519 lGI for vertex number 801 of the outer mesh is 2.5677 lGI for vertex number 901 of the outer mesh is 2.5594 lGI for vertex number 1001 of the outer mesh is 2.6118 lGI for vertex number 1101 of the outer mesh is 2.5516 lGI for vertex number 1201 of the outer mesh is 3.0644 lGI for vertex number 1301 of the outer mesh is 2.4379 lGI for vertex number 1401 of the outer mesh is 2.9312 lGI for vertex number 1501 of the outer mesh is 2.8287 lGI for vertex number 1601 of the outer mesh is 2.8048 lGI for vertex number 1701 of the outer mesh is 3.0761 lGI for vertex number 1801 of the outer mesh is 2.794 lGI for vertex number 1901 of the outer mesh is 2.9971 lGI for vertex number 2001 of the outer mesh is 3.2964 lGI for vertex number 2101 of the outer mesh is 2.6907 lGI for vertex number 2201 of the outer mesh is 3.2586 lGI for vertex number 2301 of the outer mesh is 3.213 lGI for vertex number 2401 of the outer mesh is 2.4928 lGI for vertex number 2501 of the outer mesh is 2.6026 lGI for vertex number 2601 of the outer mesh is 2.6281 lGI for vertex number 2701 of the outer mesh is 2.8631 lGI for vertex number 2801 of the outer mesh is 2.7666 lGI for vertex number 2901 of the outer mesh is 2.7037 lGI for vertex number 3001 of the outer mesh is 2.6136 lGI for vertex number 3101 of the outer mesh is 3.2769 lGI for vertex number 3201 of the outer mesh is 3.1199 lGI for vertex number 3301 of the outer mesh is 3.4866 lGI for vertex number 3401 of the outer mesh is 2.7733 lGI for vertex number 3501 of the outer mesh is 2.8363 lGI for vertex number 3601 of the outer mesh is 3.5046 lGI for vertex number 3701 of the outer mesh is 2.8934 lGI for vertex number 3801 of the outer mesh is 3.4868 lGI for vertex number 3901 of the outer mesh is 3.012 lGI for vertex number 4001 of the outer mesh is 2.6347 lGI for vertex number 4101 of the outer mesh is 3.4673 lGI for vertex number 4201 of the outer mesh is 3.2254 lGI for vertex number 4301 of the outer mesh is 3.8785 lGI for vertex number 4401 of the outer mesh is 3.4441 lGI for vertex number 4501 of the outer mesh is 2.8244 lGI for vertex number 4601 of the outer mesh is 3.4065 lGI for vertex number 4701 of the outer mesh is 4.2938 lGI for vertex number 4801 of the outer mesh is 3.5356 lGI for vertex number 4901 of the outer mesh is 2.9022 lGI for vertex number 5001 of the outer mesh is 3.2225 lGI for vertex number 5101 of the outer mesh is 3.7077 lGI for vertex number 5201 of the outer mesh is 3.719 lGI for vertex number 5301 of the outer mesh is 3.3071 lGI for vertex number 5401 of the outer mesh is 3.9609 lGI for vertex number 5501 of the outer mesh is 3.5245 lGI for vertex number 5601 of the outer mesh is 3.2814 lGI for vertex number 5701 of the outer mesh is 3.7007 lGI for vertex number 5801 of the outer mesh is 4.0753 lGI for vertex number 5901 of the outer mesh is 3.5904 lGI for vertex number 6001 of the outer mesh is 3.2724 lGI for vertex number 6101 of the outer mesh is 4.0687 lGI for vertex number 6201 of the outer mesh is 4.3051 lGI for vertex number 6301 of the outer mesh is 3.018 lGI for vertex number 6401 of the outer mesh is 2.8159 lGI for vertex number 6501 of the outer mesh is 3.5945 lGI for vertex number 6601 of the outer mesh is 3.5512 lGI for vertex number 6701 of the outer mesh is 2.961 lGI for vertex number 6801 of the outer mesh is 3.1219 lGI for vertex number 6901 of the outer mesh is 3.8109 lGI for vertex number 7001 of the outer mesh is 3.377 lGI for vertex number 7101 of the outer mesh is 2.897 lGI for vertex number 7201 of the outer mesh is 3.7647 lGI for vertex number 7301 of the outer mesh is 4.5265 lGI for vertex number 7401 of the outer mesh is 3.6981 lGI for vertex number 7501 of the outer mesh is 3.9582 lGI for vertex number 7601 of the outer mesh is 3.1474 lGI for vertex number 7701 of the outer mesh is 4.1709 lGI for vertex number 7801 of the outer mesh is 3.5538 lGI for vertex number 7901 of the outer mesh is 4.3204 lGI for vertex number 8001 of the outer mesh is 3.9133 lGI for vertex number 8101 of the outer mesh is 4.3379 lGI for vertex number 8201 of the outer mesh is 3.1866 lGI for vertex number 8301 of the outer mesh is 3.923 lGI for vertex number 8401 of the outer mesh is 3.1148 lGI for vertex number 8501 of the outer mesh is 3.4603 lGI for vertex number 8601 of the outer mesh is 3.0456 lGI for vertex number 8701 of the outer mesh is 4.5758 lGI for vertex number 8801 of the outer mesh is 3.8287 lGI for vertex number 8901 of the outer mesh is 3.9211 lGI for vertex number 9001 of the outer mesh is 3.282 lGI for vertex number 9101 of the outer mesh is 4.6421 lGI for vertex number 9201 of the outer mesh is 3.2357 lGI for vertex number 9301 of the outer mesh is 4.2009 lGI for vertex number 9401 of the outer mesh is 3.1213 lGI for vertex number 9501 of the outer mesh is 2.6459 lGI for vertex number 9601 of the outer mesh is 3.1614 lGI for vertex number 9701 of the outer mesh is 3.8815 lGI for vertex number 9801 of the outer mesh is 3.3265 lGI for vertex number 9901 of the outer mesh is 2.9161 lGI for vertex number 10001 of the outer mesh is 3.945 ratio saved at 10001 lGI for vertex number 10101 of the outer mesh is 4.0572 lGI for vertex number 10201 of the outer mesh is 3.3986 lGI for vertex number 10301 of the outer mesh is 2.6232 lGI for vertex number 10401 of the outer mesh is 3.9686 lGI for vertex number 10501 of the outer mesh is 4.092 lGI for vertex number 10601 of the outer mesh is 3.9622 lGI for vertex number 10701 of the outer mesh is 3.4548 lGI for vertex number 10801 of the outer mesh is 2.989 lGI for vertex number 10901 of the outer mesh is 3.2126 lGI for vertex number 11001 of the outer mesh is 3.7769 lGI for vertex number 11101 of the outer mesh is 2.5396 lGI for vertex number 11201 of the outer mesh is 2.6513 lGI for vertex number 11301 of the outer mesh is 3.9385 lGI for vertex number 11401 of the outer mesh is 2.9091 lGI for vertex number 11501 of the outer mesh is 3.9614 lGI for vertex number 11601 of the outer mesh is 3.3152 lGI for vertex number 11701 of the outer mesh is 4.2992 lGI for vertex number 11801 of the outer mesh is 3.1355 lGI for vertex number 11901 of the outer mesh is 4.8408 lGI for vertex number 12001 of the outer mesh is 3.3174 lGI for vertex number 12101 of the outer mesh is 3.4309 lGI for vertex number 12201 of the outer mesh is 4.3344 lGI for vertex number 12301 of the outer mesh is 3.2566 lGI for vertex number 12401 of the outer mesh is 4.0483 lGI for vertex number 12501 of the outer mesh is 3.094 lGI for vertex number 12601 of the outer mesh is 3.8688 lGI for vertex number 12701 of the outer mesh is 3.8242 lGI for vertex number 12801 of the outer mesh is 3.1633 lGI for vertex number 12901 of the outer mesh is 4.6655 lGI for vertex number 13001 of the outer mesh is 2.4308 lGI for vertex number 13101 of the outer mesh is 2.7487 lGI for vertex number 13201 of the outer mesh is 3.1123 lGI for vertex number 13301 of the outer mesh is 3.1111 lGI for vertex number 13401 of the outer mesh is 4.9523 lGI for vertex number 13501 of the outer mesh is 3.5098 lGI for vertex number 13601 of the outer mesh is 3.0324 lGI for vertex number 13701 of the outer mesh is 3.7126 lGI for vertex number 13801 of the outer mesh is 4.52 lGI for vertex number 13901 of the outer mesh is 2.3737 lGI for vertex number 14001 of the outer mesh is 4.1078 lGI for vertex number 14101 of the outer mesh is 3.9648 lGI for vertex number 14201 of the outer mesh is 3.2702 lGI for vertex number 14301 of the outer mesh is 4.6551 lGI for vertex number 14401 of the outer mesh is 3.6182 lGI for vertex number 14501 of the outer mesh is 2.6861 lGI for vertex number 14601 of the outer mesh is 3.2758 lGI for vertex number 14701 of the outer mesh is 4.5539 lGI for vertex number 14801 of the outer mesh is 2.9145 lGI for vertex number 14901 of the outer mesh is 2.9872 lGI for vertex number 15001 of the outer mesh is 3.8797 lGI for vertex number 15101 of the outer mesh is 3.1481 lGI for vertex number 15201 of the outer mesh is 3.7177 lGI for vertex number 15301 of the outer mesh is 3.897 lGI for vertex number 15401 of the outer mesh is 3.0742 lGI for vertex number 15501 of the outer mesh is 3.5947 lGI for vertex number 15601 of the outer mesh is 4.0748 lGI for vertex number 15701 of the outer mesh is 3.3948 lGI for vertex number 15801 of the outer mesh is 3.6578 lGI for vertex number 15901 of the outer mesh is 3.8862 lGI for vertex number 16001 of the outer mesh is 4.1467 lGI for vertex number 16101 of the outer mesh is 3.9829 lGI for vertex number 16201 of the outer mesh is 3.3456 lGI for vertex number 16301 of the outer mesh is 3.7994 lGI for vertex number 16401 of the outer mesh is 3.9195 lGI for vertex number 16501 of the outer mesh is 3.2278 lGI for vertex number 16601 of the outer mesh is 3.2376 lGI for vertex number 16701 of the outer mesh is 3.4218 lGI for vertex number 16801 of the outer mesh is 3.7115 lGI for vertex number 16901 of the outer mesh is 3.6489 lGI for vertex number 17001 of the outer mesh is 4.2318 lGI for vertex number 17101 of the outer mesh is 4.1223 lGI for vertex number 17201 of the outer mesh is 2.7997 lGI for vertex number 17301 of the outer mesh is 3.9811 lGI for vertex number 17401 of the outer mesh is 3.5003 lGI for vertex number 17501 of the outer mesh is 5.0861 lGI for vertex number 17601 of the outer mesh is 2.3839 lGI for vertex number 17701 of the outer mesh is 2.9858 lGI for vertex number 17801 of the outer mesh is 3.5532 lGI for vertex number 17901 of the outer mesh is 3.0853 lGI for vertex number 18001 of the outer mesh is 4.3021 lGI for vertex number 18101 of the outer mesh is 3.4059 lGI for vertex number 18201 of the outer mesh is 3.4563 lGI for vertex number 18301 of the outer mesh is 2.2994 lGI for vertex number 18401 of the outer mesh is 4.3471 lGI for vertex number 18501 of the outer mesh is 3.6974 lGI for vertex number 18601 of the outer mesh is 4.262 lGI for vertex number 18701 of the outer mesh is 2.3298 lGI for vertex number 18801 of the outer mesh is 2.7835 lGI for vertex number 18901 of the outer mesh is 4.4622 lGI for vertex number 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4.1444 lGI for vertex number 20801 of the outer mesh is 2.6121 lGI for vertex number 20901 of the outer mesh is 4.358 lGI for vertex number 21001 of the outer mesh is 3.0311 lGI for vertex number 21101 of the outer mesh is 3.9407 lGI for vertex number 21201 of the outer mesh is 3.833 lGI for vertex number 21301 of the outer mesh is 3.8041 lGI for vertex number 21401 of the outer mesh is 3.1888 lGI for vertex number 21501 of the outer mesh is 4.8322 lGI for vertex number 21601 of the outer mesh is 2.8946 lGI for vertex number 21701 of the outer mesh is 4.2199 lGI for vertex number 21801 of the outer mesh is 3.7612 lGI for vertex number 21901 of the outer mesh is 2.8751 lGI for vertex number 22001 of the outer mesh is 2.9747 lGI for vertex number 22101 of the outer mesh is 2.8476 lGI for vertex number 22201 of the outer mesh is 2.3259 lGI for vertex number 22301 of the outer mesh is 2.4538 lGI for vertex number 22401 of the outer mesh is 3.3908 lGI for vertex number 22501 of the outer mesh is 2.4538 lGI for vertex number 22601 of the outer mesh is 2.9482 lGI for vertex number 22701 of the outer mesh is 3.9083 lGI for vertex number 22801 of the outer mesh is 2.5262 lGI for vertex number 22901 of the outer mesh is 3.9767 lGI for vertex number 23001 of the outer mesh is 3.051 lGI for vertex number 23101 of the outer mesh is 4.1916 lGI for vertex number 23201 of the outer mesh is 3.1374 lGI for vertex number 23301 of the outer mesh is 4.2174 lGI for vertex number 23401 of the outer mesh is 3.2839 lGI for vertex number 23501 of the outer mesh is 3.3781 lGI for vertex number 23601 of the outer mesh is 3.3751 lGI for vertex number 23701 of the outer mesh is 3.1855 lGI for vertex number 23801 of the outer mesh is 3.3971 lGI for vertex number 23901 of the outer mesh is 2.5504 lGI for vertex number 24001 of the outer mesh is 4.2515 lGI for vertex number 24101 of the outer mesh is 3.5141 lGI for vertex number 24201 of the outer mesh is 2.8646 lGI for vertex number 24301 of the outer mesh is 3.8905 lGI for vertex number 24401 of the outer mesh is 2.59 lGI for vertex number 24501 of the outer mesh is 2.3535 lGI for vertex number 24601 of the outer mesh is 4.8137 lGI for vertex number 24701 of the outer mesh is 3.3514 lGI for vertex number 24801 of the outer mesh is 2.7436 lGI for vertex number 24901 of the outer mesh is 3.8446 lGI for vertex number 25001 of the outer mesh is 2.7714 lGI for vertex number 25101 of the outer mesh is 4.5346 lGI for vertex number 25201 of the outer mesh is 3.5325 lGI for vertex number 25301 of the outer mesh is 3.1994 lGI for vertex number 25401 of the outer mesh is 3.5056 lGI for vertex number 25501 of the outer mesh is 3.2827 lGI for vertex number 25601 of the outer mesh is 3.1062 lGI for vertex number 25701 of the outer mesh is 3.3532 lGI for vertex number 25801 of the outer mesh is 2.5068 lGI for vertex number 25901 of the outer mesh is 2.4566 lGI for vertex number 26001 of the outer mesh is 3.5365 lGI for vertex number 26101 of the outer mesh is 2.4886 lGI for vertex number 26201 of the outer mesh is 3.0198 lGI for vertex number 26301 of the outer mesh is 3.0455 lGI for vertex number 26401 of the outer mesh is 2.4933 lGI for vertex number 26501 of the outer mesh is 3.5003 lGI for vertex number 26601 of the outer mesh is 2.9303 lGI for vertex number 26701 of the outer mesh is 3.0753 lGI for vertex number 26801 of the outer mesh is 2.52 lGI for vertex number 26901 of the outer mesh is 2.3772 lGI for vertex number 27001 of the outer mesh is 2.4756 lGI for vertex number 27101 of the outer mesh is 3.0922 lGI for vertex number 27201 of the outer mesh is 3.1638 lGI for vertex number 27301 of the outer mesh is 4.1719 lGI for vertex number 27401 of the outer mesh is 3.5213 lGI for vertex number 27501 of the outer mesh is 4.8864 lGI for vertex number 27601 of the outer mesh is 3.3905 lGI for vertex number 27701 of the outer mesh is 3.0249 lGI for vertex number 27801 of the outer mesh is 2.9742 lGI for vertex number 27901 of the outer mesh is 3.2663 lGI for vertex number 28001 of the outer mesh is 2.4702 lGI for vertex number 28101 of the outer mesh is 3.6584 lGI for vertex number 28201 of the outer mesh is 2.9618 lGI for vertex number 28301 of the outer mesh is 2.3441 lGI for vertex number 28401 of the outer mesh is 2.7626 lGI for vertex number 28501 of the outer mesh is 3.1911 lGI for vertex number 28601 of the outer mesh is 3.8869 lGI for vertex number 28701 of the outer mesh is 3.4002 lGI for vertex number 28801 of the outer mesh is 2.8528 lGI for vertex number 28901 of the outer mesh is 2.9147 lGI for vertex number 29001 of the outer mesh is 3.0603 lGI for vertex number 29101 of the outer mesh is 2.2689 lGI for vertex number 29201 of the outer mesh is 3.3744 lGI for vertex number 29301 of the outer mesh is 1.8168 lGI for vertex number 29401 of the outer mesh is 4.0459 lGI for vertex number 29501 of the outer mesh is 2.5261 lGI for vertex number 29601 of the outer mesh is 3.8949 lGI for vertex number 29701 of the outer mesh is 3.3904 lGI for vertex number 29801 of the outer mesh is 2.6108 lGI for vertex number 29901 of the outer mesh is 4.2485 lGI for vertex number 30001 of the outer mesh is 2.3269 ratio saved at 30001 lGI for vertex number 30101 of the outer mesh is 3.7538 lGI for vertex number 30201 of the outer mesh is 3.5065 lGI for vertex number 30301 of the outer mesh is 1.7646 lGI for vertex number 30401 of the outer mesh is 2.9688 lGI for vertex number 30501 of the outer mesh is 3.6312 lGI for vertex number 30601 of the outer mesh is 2.9543 lGI for vertex number 30701 of the outer mesh is 3.1776 lGI for vertex number 30801 of the outer mesh is 3.3257 lGI for vertex number 30901 of the outer mesh is 2.3569 lGI for vertex number 31001 of the outer mesh is 2.3729 lGI for vertex number 31101 of the outer mesh is 3.3605 lGI for vertex number 31201 of the outer mesh is 3.2625 lGI for vertex number 31301 of the outer mesh is 3.1098 lGI for vertex number 31401 of the outer mesh is 3.0064 lGI for vertex number 31501 of the outer mesh is 2.3472 lGI for vertex number 31601 of the outer mesh is 3.0545 lGI for vertex number 31701 of the outer mesh is 2.2285 lGI for vertex number 31801 of the outer mesh is 3.2859 lGI for vertex number 31901 of the outer mesh is 2.263 lGI for vertex number 32001 of the outer mesh is 5.4917 lGI for vertex number 32101 of the outer mesh is 3.3511 lGI for vertex number 32201 of the outer mesh is 2.2745 lGI for vertex number 32301 of the outer mesh is 2.8214 lGI for vertex number 32401 of the outer mesh is 2.9944 lGI for vertex number 32501 of the outer mesh is 5.3299 lGI for vertex number 32601 of the outer mesh is 3.184 lGI for vertex number 32701 of the outer mesh is 4.1197 lGI for vertex number 32801 of the outer mesh is 2.0048 lGI for vertex number 32901 of the outer mesh is 2.9115 lGI for vertex number 33001 of the outer mesh is 2.6972 lGI for vertex number 33101 of the outer mesh is 5.3475 lGI for vertex number 33201 of the outer mesh is 3.3757 lGI for vertex number 33301 of the outer mesh is 4.5349 lGI for vertex number 33401 of the outer mesh is 3.1213 lGI for vertex number 33501 of the outer mesh is 2.8088 lGI for vertex number 33601 of the outer mesh is 5.4571 lGI for vertex number 33701 of the outer mesh is 2.0605 lGI for vertex number 33801 of the outer mesh is 2.2417 lGI for vertex number 33901 of the outer mesh is 3.1551 lGI for vertex number 34001 of the outer mesh is 2.5677 lGI for vertex number 34101 of the outer mesh is 5.5002 lGI for vertex number 34201 of the outer mesh is 3.3128 lGI for vertex number 34301 of the outer mesh is 2.2499 lGI for vertex number 34401 of the outer mesh is 2.9312 lGI for vertex number 34501 of the outer mesh is 2.704 lGI for vertex number 34601 of the outer mesh is 3.8097 lGI for vertex number 34701 of the outer mesh is 2.207 lGI for vertex number 34801 of the outer mesh is 2.1889 lGI for vertex number 34901 of the outer mesh is 3.5579 lGI for vertex number 35001 of the outer mesh is 1.592 lGI for vertex number 35101 of the outer mesh is 5.9791 lGI for vertex number 35201 of the outer mesh is 3.795 lGI for vertex number 35301 of the outer mesh is 4.7574 lGI for vertex number 35401 of the outer mesh is 2.5658 lGI for vertex number 35501 of the outer mesh is 2.7893 lGI for vertex number 35601 of the outer mesh is 1.6005 lGI for vertex number 35701 of the outer mesh is 5.4345 lGI for vertex number 35801 of the outer mesh is 2.3727 lGI for vertex number 35901 of the outer mesh is 4.7041 lGI for vertex number 36001 of the outer mesh is 2.9177 lGI for vertex number 36101 of the outer mesh is 3.0967 lGI for vertex number 36201 of the outer mesh is 5.7933 lGI for vertex number 36301 of the outer mesh is 4.7974 lGI for vertex number 36401 of the outer mesh is 4.3561 lGI for vertex number 36501 of the outer mesh is 2.6283 lGI for vertex number 36601 of the outer mesh is 2.9069 lGI for vertex number 36701 of the outer mesh is 2.1551 lGI for vertex number 36801 of the outer mesh is 3.0165 lGI for vertex number 36901 of the outer mesh is 1.9804 lGI for vertex number 37001 of the outer mesh is 2.9395 lGI for vertex number 37101 of the outer mesh is 2.3164 lGI for vertex number 37201 of the outer mesh is 1.8234 lGI for vertex number 37301 of the outer mesh is 2.7849 lGI for vertex number 37401 of the outer mesh is 3.7334 lGI for vertex number 37501 of the outer mesh is 1.9616 lGI for vertex number 37601 of the outer mesh is 2.3246 lGI for vertex number 37701 of the outer mesh is 2.1878 lGI for vertex number 37801 of the outer mesh is 3.6286 lGI for vertex number 37901 of the outer mesh is 4.2823 lGI for vertex number 38001 of the outer mesh is 2.7403 lGI for vertex number 38101 of the outer mesh is 2.2294 lGI for vertex number 38201 of the outer mesh is 2.3489 lGI for vertex number 38301 of the outer mesh is 5.7554 lGI for vertex number 38401 of the outer mesh is 4.2483 lGI for vertex number 38501 of the outer mesh is 2.3791 lGI for vertex number 38601 of the outer mesh is 2.6608 lGI for vertex number 38701 of the outer mesh is 2.56 lGI for vertex number 38801 of the outer mesh is 5.5655 lGI for vertex number 38901 of the outer mesh is 3.3648 lGI for vertex number 39001 of the outer mesh is 4.9896 lGI for vertex number 39101 of the outer mesh is 2.4574 lGI for vertex number 39201 of the outer mesh is 2.3783 lGI for vertex number 39301 of the outer mesh is 5.7644 lGI for vertex number 39401 of the outer mesh is 4.2886 lGI for vertex number 39501 of the outer mesh is 2.6066 lGI for vertex number 39601 of the outer mesh is 2.5815 lGI for vertex number 39701 of the outer mesh is 2.4215 lGI for vertex number 39801 of the outer mesh is 5.7577 lGI for vertex number 39901 of the outer mesh is 2.6475 lGI for vertex number 40001 of the outer mesh is 2.6324 ratio saved at 40001 lGI for vertex number 40101 of the outer mesh is 3.3145 lGI for vertex number 40201 of the outer mesh is 2.5165 lGI for vertex number 40301 of the outer mesh is 6.0343 lGI for vertex number 40401 of the outer mesh is 3.0564 lGI for vertex number 40501 of the outer mesh is 5.0798 lGI for vertex number 40601 of the outer mesh is 3.013 lGI for vertex number 40701 of the outer mesh is 1.7411 lGI for vertex number 40801 of the outer mesh is 5.7816 lGI for vertex number 40901 of the outer mesh is 3.7769 lGI for vertex number 41001 of the outer mesh is 2.7838 lGI for vertex number 41101 of the outer mesh is 2.5297 lGI for vertex number 41201 of the outer mesh is 2.5178 lGI for vertex number 41301 of the outer mesh is 4.0166 lGI for vertex number 41401 of the outer mesh is 4.5387 lGI for vertex number 41501 of the outer mesh is 4.3931 lGI for vertex number 41601 of the outer mesh is 2.4019 lGI for vertex number 41701 of the outer mesh is 1.865 lGI for vertex number 41801 of the outer mesh is 3.4002 lGI for vertex number 41901 of the outer mesh is 2.8098 lGI for vertex number 42001 of the outer mesh is 4.3448 lGI for vertex number 42101 of the outer mesh is 2.3742 lGI for vertex number 42201 of the outer mesh is 1.8981 lGI for vertex number 42301 of the outer mesh is 5.7333 lGI for vertex number 42401 of the outer mesh is 4.9793 lGI for vertex number 42501 of the outer mesh is 4.5045 lGI for vertex number 42601 of the outer mesh is 2.5016 lGI for vertex number 42701 of the outer mesh is 2.5091 lGI for vertex number 42801 of the outer mesh is 6.3226 lGI for vertex number 42901 of the outer mesh is 2.9432 lGI for vertex number 43001 of the outer mesh is 4.7684 lGI for vertex number 43101 of the outer mesh is 2.4405 lGI for vertex number 43201 of the outer mesh is 2.4659 lGI for vertex number 43301 of the outer mesh is 5.8336 lGI for vertex number 43401 of the outer mesh is 3.568 lGI for vertex number 43501 of the outer mesh is 2.7048 lGI for vertex number 43601 of the outer mesh is 3.8069 lGI for vertex number 43701 of the outer mesh is 1.8022 lGI for vertex number 43801 of the outer mesh is 1.9616 lGI for vertex number 43901 of the outer mesh is 3.4996 lGI for vertex number 44001 of the outer mesh is 3.0936 lGI for vertex number 44101 of the outer mesh is 4.2637 lGI for vertex number 44201 of the outer mesh is 2.0301 lGI for vertex number 44301 of the outer mesh is 2.3751 lGI for vertex number 44401 of the outer mesh is 6.2436 lGI for vertex number 44501 of the outer mesh is 3.9745 lGI for vertex number 44601 of the outer mesh is 2.7749 lGI for vertex number 44701 of the outer mesh is 2.7494 lGI for vertex number 44801 of the outer mesh is 1.5589 lGI for vertex number 44901 of the outer mesh is 6.3119 lGI for vertex number 45001 of the outer mesh is 4.7313 lGI for vertex number 45101 of the outer mesh is 4.6648 lGI for vertex number 45201 of the outer mesh is 2.9987 lGI for vertex number 45301 of the outer mesh is 2.6537 lGI for vertex number 45401 of the outer mesh is 2.3546 lGI for vertex number 45501 of the outer mesh is 1.7907 lGI for vertex number 45601 of the outer mesh is 4.8675 lGI for vertex number 45701 of the outer mesh is 2.8434 lGI for vertex number 45801 of the outer mesh is 2.2757 lGI for vertex number 45901 of the outer mesh is 2.3856 lGI for vertex number 46001 of the outer mesh is 3.2936 lGI for vertex number 46101 of the outer mesh is 2.8477 lGI for vertex number 46201 of the outer mesh is 2.944 lGI for vertex number 46301 of the outer mesh is 1.85 lGI for vertex number 46401 of the outer mesh is 5.6766 lGI for vertex number 46501 of the outer mesh is 3.4204 lGI for vertex number 46601 of the outer mesh is 3.6083 lGI for vertex number 46701 of the outer mesh is 2.2556 lGI for vertex number 46801 of the outer mesh is 6.219 lGI for vertex number 46901 of the outer mesh is 3.5973 lGI for vertex number 47001 of the outer mesh is 4.6985 lGI for vertex number 47101 of the outer mesh is 2.1781 lGI for vertex number 47201 of the outer mesh is 1.9699 lGI for vertex number 47301 of the outer mesh is 3.4311 lGI for vertex number 47401 of the outer mesh is 2.989 lGI for vertex number 47501 of the outer mesh is 2.6533 lGI for vertex number 47601 of the outer mesh is 1.9352 lGI for vertex number 47701 of the outer mesh is 4.3379 lGI for vertex number 47801 of the outer mesh is 4.3731 lGI for vertex number 47901 of the outer mesh is 2.6694 lGI for vertex number 48001 of the outer mesh is 1.9495 lGI for vertex number 48101 of the outer mesh is 2.0726 lGI for vertex number 48201 of the outer mesh is 4.7955 lGI for vertex number 48301 of the outer mesh is 3.9826 lGI for vertex number 48401 of the outer mesh is 2.801 lGI for vertex number 48501 of the outer mesh is 2.1586 lGI for vertex number 48601 of the outer mesh is 4.886 lGI for vertex number 48701 of the outer mesh is 2.9374 lGI for vertex number 48801 of the outer mesh is 2.8572 lGI for vertex number 48901 of the outer mesh is 2.2646 lGI for vertex number 49001 of the outer mesh is 5.2437 lGI for vertex number 49101 of the outer mesh is 4.5111 lGI for vertex number 49201 of the outer mesh is 2.5111 lGI for vertex number 49301 of the outer mesh is 2.1726 lGI for vertex number 49401 of the outer mesh is 2.033 lGI for vertex number 49501 of the outer mesh is 3.9546 lGI for vertex number 49601 of the outer mesh is 5.0074 lGI for vertex number 49701 of the outer mesh is 3.3638 lGI for vertex number 49801 of the outer mesh is 2.2877 lGI for vertex number 49901 of the outer mesh is 5.1741 lGI for vertex number 50001 of the outer mesh is 3.3421 ratio saved at 50001 lGI for vertex number 50101 of the outer mesh is 2.5825 lGI for vertex number 50201 of the outer mesh is 2.2761 lGI for vertex number 50301 of the outer mesh is 2.2329 lGI for vertex number 50401 of the outer mesh is 4.0652 lGI for vertex number 50501 of the outer mesh is 2.6127 lGI for vertex number 50601 of the outer mesh is 2.2911 lGI for vertex number 50701 of the outer mesh is 2.2661 lGI for vertex number 50801 of the outer mesh is 3.8223 lGI for vertex number 50901 of the outer mesh is 3.6193 lGI for vertex number 51001 of the outer mesh is 2.0122 lGI for vertex number 51101 of the outer mesh is 2.2548 lGI for vertex number 51201 of the outer mesh is 3.712 lGI for vertex number 51301 of the outer mesh is 2.7904 lGI for vertex number 51401 of the outer mesh is 2.6446 lGI for vertex number 51501 of the outer mesh is 2.1511 lGI for vertex number 51601 of the outer mesh is 3.2184 lGI for vertex number 51701 of the outer mesh is 2.6236 lGI for vertex number 51801 of the outer mesh is 1.9056 lGI for vertex number 51901 of the outer mesh is 2.316 lGI for vertex number 52001 of the outer mesh is 3.2629 lGI for vertex number 52101 of the outer mesh is 3.071 lGI for vertex number 52201 of the outer mesh is 2.0084 lGI for vertex number 52301 of the outer mesh is 2.3111 lGI for vertex number 52401 of the outer mesh is 4.2129 lGI for vertex number 52501 of the outer mesh is 2.4964 lGI for vertex number 52601 of the outer mesh is 2.3976 lGI for vertex number 52701 of the outer mesh is 2.2545 lGI for vertex number 52801 of the outer mesh is 3.3423 lGI for vertex number 52901 of the outer mesh is 3.599 lGI for vertex number 53001 of the outer mesh is 2.0914 lGI for vertex number 53101 of the outer mesh is 5.396 lGI for vertex number 53201 of the outer mesh is 4.1651 lGI for vertex number 53301 of the outer mesh is 2.3943 lGI for vertex number 53401 of the outer mesh is 2.0196 lGI for vertex number 53501 of the outer mesh is 4.0544 lGI for vertex number 53601 of the outer mesh is 4.4225 lGI for vertex number 53701 of the outer mesh is 2.5811 lGI for vertex number 53801 of the outer mesh is 2.3224 lGI for vertex number 53901 of the outer mesh is 3.7895 lGI for vertex number 54001 of the outer mesh is 3.9999 lGI for vertex number 54101 of the outer mesh is 2.196 lGI for vertex number 54201 of the outer mesh is 2.051 lGI for vertex number 54301 of the outer mesh is 3.8913 lGI for vertex number 54401 of the outer mesh is 3.3396 lGI for vertex number 54501 of the outer mesh is 2.7392 lGI for vertex number 54601 of the outer mesh is 2.0672 lGI for vertex number 54701 of the outer mesh is 3.6716 lGI for vertex number 54801 of the outer mesh is 4.0749 lGI for vertex number 54901 of the outer mesh is 2.1936 lGI for vertex number 55001 of the outer mesh is 2.3897 lGI for vertex number 55101 of the outer mesh is 3.6717 lGI for vertex number 55201 of the outer mesh is 4.0634 lGI for vertex number 55301 of the outer mesh is 2.4761 lGI for vertex number 55401 of the outer mesh is 2.2809 lGI for vertex number 55501 of the outer mesh is 2.3042 lGI for vertex number 55601 of the outer mesh is 3.8793 lGI for vertex number 55701 of the outer mesh is 2.9994 lGI for vertex number 55801 of the outer mesh is 2.2162 lGI for vertex number 55901 of the outer mesh is 2.4709 lGI for vertex number 56001 of the outer mesh is 3.3112 lGI for vertex number 56101 of the outer mesh is 2.8806 lGI for vertex number 56201 of the outer mesh is 2.5238 lGI for vertex number 56301 of the outer mesh is 2.3796 lGI for vertex number 56401 of the outer mesh is 3.3677 lGI for vertex number 56501 of the outer mesh is 4.2275 lGI for vertex number 56601 of the outer mesh is 2.8869 lGI for vertex number 56701 of the outer mesh is 2.08 lGI for vertex number 56801 of the outer mesh is 2.7442 lGI for vertex number 56901 of the outer mesh is 3.9617 lGI for vertex number 57001 of the outer mesh is 2.0303 lGI for vertex number 57101 of the outer mesh is 2.226 lGI for vertex number 57201 of the outer mesh is 3.7329 lGI for vertex number 57301 of the outer mesh is 3.1104 lGI for vertex number 57401 of the outer mesh is 2.2668 lGI for vertex number 57501 of the outer mesh is 2.9072 lGI for vertex number 57601 of the outer mesh is 4.1594 lGI for vertex number 57701 of the outer mesh is 2.0632 lGI for vertex number 57801 of the outer mesh is 2.2295 lGI for vertex number 57901 of the outer mesh is 2.8546 lGI for vertex number 58001 of the outer mesh is 3.6711 lGI for vertex number 58101 of the outer mesh is 2.528 lGI for vertex number 58201 of the outer mesh is 2.2417 lGI for vertex number 58301 of the outer mesh is 3.6354 lGI for vertex number 58401 of the outer mesh is 2.4788 lGI for vertex number 58501 of the outer mesh is 2.5629 lGI for vertex number 58601 of the outer mesh is 2.1446 lGI for vertex number 58701 of the outer mesh is 2.8103 lGI for vertex number 58801 of the outer mesh is 3.2006 lGI for vertex number 58901 of the outer mesh is 2.5183 lGI for vertex number 59001 of the outer mesh is 2.31 lGI for vertex number 59101 of the outer mesh is 2.901 lGI for vertex number 59201 of the outer mesh is 2.2124 lGI for vertex number 59301 of the outer mesh is 2.6386 lGI for vertex number 59401 of the outer mesh is 2.1281 lGI for vertex number 59501 of the outer mesh is 3.1281 lGI for vertex number 59601 of the outer mesh is 2.5465 lGI for vertex number 59701 of the outer mesh is 2.8557 lGI for vertex number 59801 of the outer mesh is 2.1863 lGI for vertex number 59901 of the outer mesh is 3.78 lGI for vertex number 60001 of the outer mesh is 2.7377 ratio saved at 60001 lGI for vertex number 60101 of the outer mesh is 2.6014 lGI for vertex number 60201 of the outer mesh is 2.4625 lGI for vertex number 60301 of the outer mesh is 2.8473 lGI for vertex number 60401 of the outer mesh is 2.8687 lGI for vertex number 60501 of the outer mesh is 2.2137 lGI for vertex number 60601 of the outer mesh is 3.4406 lGI for vertex number 60701 of the outer mesh is 2.3504 lGI for vertex number 60801 of the outer mesh is 2.2267 lGI for vertex number 60901 of the outer mesh is 3.4026 lGI for vertex number 61001 of the outer mesh is 2.554 lGI for vertex number 61101 of the outer mesh is 2.4944 lGI for vertex number 61201 of the outer mesh is 2.4047 lGI for vertex number 61301 of the outer mesh is 2.9045 lGI for vertex number 61401 of the outer mesh is 2.3079 lGI for vertex number 61501 of the outer mesh is 2.5322 lGI for vertex number 61601 of the outer mesh is 2.9534 lGI for vertex number 61701 of the outer mesh is 2.9382 lGI for vertex number 61801 of the outer mesh is 2.5201 lGI for vertex number 61901 of the outer mesh is 2.7565 lGI for vertex number 62001 of the outer mesh is 2.8457 lGI for vertex number 62101 of the outer mesh is 2.2004 lGI for vertex number 62201 of the outer mesh is 2.395 lGI for vertex number 62301 of the outer mesh is 2.496 lGI for vertex number 62401 of the outer mesh is 2.6085 lGI for vertex number 62501 of the outer mesh is 2.2225 lGI for vertex number 62601 of the outer mesh is 2.2399 lGI for vertex number 62701 of the outer mesh is 2.5619 lGI for vertex number 62801 of the outer mesh is 2.816 lGI for vertex number 62901 of the outer mesh is 2.4435 lGI for vertex number 63001 of the outer mesh is 2.5656 lGI for vertex number 63101 of the outer mesh is 2.7581 lGI for vertex number 63201 of the outer mesh is 2.6586 lGI for vertex number 63301 of the outer mesh is 2.5623 lGI for vertex number 63401 of the outer mesh is 2.8964 lGI for vertex number 63501 of the outer mesh is 2.5884 lGI for vertex number 63601 of the outer mesh is 2.6005 lGI for vertex number 63701 of the outer mesh is 2.3376 .. Almost finished .. now back-propagating values on the folded mesh .. average_lGI_over_the_hemisphere = 3.5006 DONE. deltaT = 450.8100 ================= mris_convert -c /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial/rh.pial_lgi.asc rh.pial rh.pial_lgi ================= ================= rm -Rf /home/shenkang/Desktop/T1/RESULTS/sub057/surf/tmp-mris_compute_lgi-rh.pial ================= done. Start: Mon 21 Nov 2022 06:26:03 PM CST End: Mon 21 Nov 2022 07:14:37 PM CST Started at Mon 21 Nov 2022 05:37:18 PM CST Ended at Mon 21 Nov 2022 07:14:37 PM CST #@#%# recon-all-run-time-hours 1.622 recon-all -s sub057 finished without error at Mon 21 Nov 2022 07:14:37 PM CST New invocation of recon-all Wed 23 Nov 2022 03:17:51 PM CST /home/shenkang/Desktop/T1/RESULTS/sub057 /opt/freesurfer/bin/recon-all -s sub057 -qcache -measure pial_lgi subjid sub057 setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS FREESURFER_HOME /opt/freesurfer Actual FREESURFER_HOME /opt/freesurfer build-stamp.txt: freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c Linux shenkang-B560M-AORUS-ELITE 5.15.0-46-generic #49~20.04.1-Ubuntu SMP Thu Aug 4 19:15:44 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux cputime unlimited filesize unlimited datasize unlimited stacksize 8192 kbytes coredumpsize 0 kbytes memoryuse unlimited vmemoryuse unlimited descriptors 1024 memorylocked 65536 kbytes maxproc 63166 maxlocks unlimited maxsignal 63166 maxmessage 819200 maxnice 0 maxrtprio 0 maxrttime unlimited total used free shared buff/cache available Mem: 16247172 3339068 3740132 11468 9167972 12563512 Swap: 15999996 928768 15071228 ######################################## program versions used $Id: recon-all,v 1.580.2.16 2017/01/18 14:11:24 zkaufman Exp $ $Id: mri_motion_correct.fsl,v 1.15 2016/02/16 17:17:20 zkaufman Exp $ mri_convert.bin -all-info ProgramName: mri_convert.bin ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/23-07:17:51-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 FLIRT version 5.5 $Id: talairach_avi,v 1.13 2015/12/23 04:25:17 greve Exp $ mri_convert.bin --version stable6 ProgramName: tkregister2_cmdl ProgramArguments: --all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/23-07:17:51-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: tkregister2.c,v 1.132.2.1 2016/08/02 21:17:29 greve Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 Program nu_correct, built from: Package MNI N3, version 1.12.0, compiled by nicks@terrier (x86_64-unknown-linux-gnu) on 2015-06-19 at 01:25:34 ProgramName: mri_make_uchar ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_make_uchar.c,v 1.4 2011/03/02 00:04:14 nicks Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_normalize ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_normalize.c,v 1.88.2.3 2016/12/27 16:47:13 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_watershed ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_watershed.cpp,v 1.103 2016/06/17 18:00:49 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_gcut ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_gcut.cpp,v 1.14 2011/03/02 00:04:16 nicks Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_segment ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_segment.c,v 1.43.2.1 2016/10/27 22:24:52 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_label2label.bin ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_label2label.c,v 1.48.2.2 2016/12/12 14:15:26 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_em_register ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_em_register.c,v 1.105.2.1 2016/10/27 22:25:10 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_ca_normalize ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_ca_normalize.c,v 1.67.2.2 2016/10/27 22:25:09 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_ca_register ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_ca_register.c,v 1.96.2.3 2016/10/27 22:25:10 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_ca_label ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_ca_label.c,v 1.113.2.2 2016/10/27 22:25:10 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_pretess ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_pretess.c,v 1.22 2013/08/30 18:12:25 mreuter Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_fill ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_fill.c,v 1.119 2011/10/25 14:09:58 fischl Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_tessellate ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_tessellate.c,v 1.38.2.1 2016/07/26 18:46:38 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_concatenate_lta.bin ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_concatenate_lta.c,v 1.16 2015/11/21 00:06:20 greve Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_normalize_tp2 ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_normalize_tp2.c,v 1.8 2011/03/02 00:04:23 nicks Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_smooth ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_smooth.c,v 1.30 2014/01/21 18:48:21 fischl Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_inflate ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_inflate.c,v 1.45 2016/01/20 23:42:15 greve Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_curvature ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_curvature.c,v 1.31 2011/03/02 00:04:30 nicks Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_sphere ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_sphere.c,v 1.61 2016/01/20 23:42:15 greve Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_fix_topology ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_fix_topology.c,v 1.50.2.1 2016/10/27 22:25:58 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_topo_fixer ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_topo_fixer.cpp,v 1.29 2011/03/02 00:04:34 nicks Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_ca_label ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_ca_label.c,v 1.37 2014/02/04 17:46:42 fischl Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_euler_number ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_euler_number.c,v 1.10 2013/01/14 22:39:14 greve Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_make_surfaces ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_make_surfaces.c,v 1.164.2.4 2016/12/13 22:26:32 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_register ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_register.c,v 1.63 2016/01/20 23:43:04 greve Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_volmask ProgramArguments: --all-info ProgramVersion: $Name: $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_volmask.cpp,v 1.26.2.2 2016/11/18 20:05:18 zkaufman Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_anatomical_stats ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_anatomical_stats.c,v 1.79 2016/03/14 15:15:34 greve Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mrisp_paint ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mrisp_paint.c,v 1.12 2016/03/22 14:47:57 fischl Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_curvature_stats ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_curvature_stats.c,v 1.65 2015/06/04 20:50:51 nicks Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_calc ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_calc.c,v 1.54.2.1 2016/09/27 18:51:28 greve Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 $Id: mri_robust_register.cpp,v 1.77 2016/01/20 23:36:17 greve Exp $ ProgramName: mri_robust_register.bin ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_robust_register.cpp,v 1.77 2016/01/20 23:36:17 greve Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 $Id: mri_robust_template.cpp,v 1.54 2016/05/05 21:17:08 mreuter Exp $ ProgramName: mri_robust_template ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_robust_template.cpp,v 1.54 2016/05/05 21:17:08 mreuter Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_and ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_and.c,v 1.4 2011/03/02 00:04:13 nicks Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_or ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_or.c,v 1.5 2013/03/20 15:03:29 lzollei Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_fuse_segmentations ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_fuse_segmentations.c,v 1.8 2011/03/02 00:04:15 nicks Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_segstats ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_relabel_hypointensities ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2022/11/23-07:17:52-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_relabel_hypointensities.c,v 1.13 2015/05/15 18:44:10 nicks Exp $ User: shenkang Machine: shenkang-B560M-AORUS-ELITE Platform: Linux PlatformVersion: 5.15.0-46-generic CompilerName: GCC CompilerVersion: 40400 ####################################### GCADIR /opt/freesurfer/average GCA RB_all_2016-05-10.vc700.gca GCASkull RB_all_withskull_2016-05-10.vc700.gca AvgCurvTif folding.atlas.acfb40.noaparc.i12.2016-08-02.tif GCSDIR /opt/freesurfer/average GCS DKaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs ####################################### #-------------------------------------------- #@# Qdec Cache preproc lh pial_lgi fsaverage Wed 23 Nov 2022 03:17:52 PM CST /home/shenkang/Desktop/T1/RESULTS/sub057/surf mris_preproc --s sub057 --hemi lh --meas pial_lgi --target fsaverage --out lh.pial_lgi.fsaverage.mgh nsubjects = 1 tmpdir is ./tmp.mris_preproc.1753842 /home/shenkang/Desktop/T1/RESULTS/sub057/surf Log file is lh.pial_lgi.fsaverage.mris_preproc.log Wed 23 Nov 2022 03:17:52 PM CST setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf /opt/freesurfer/bin/mris_preproc --s sub057 --hemi lh --meas pial_lgi --target fsaverage --out lh.pial_lgi.fsaverage.mgh Linux shenkang-B560M-AORUS-ELITE 5.15.0-46-generic #49~20.04.1-Ubuntu SMP Thu Aug 4 19:15:44 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is ./tmp.mris_preproc.1753842 Src lh sphere.reg Trg lh sphere.reg --------------------------------------------------- #@# 1/1 sub057 Wed 23 Nov 2022 03:17:52 PM CST -------------- ----------------------- mri_surf2surf --srcsubject sub057 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.1753842/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.pial_lgi --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --srcsubject sub057 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.1753842/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.pial_lgi --sfmt curv --noreshape --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = sub057 srcval = /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.pial_lgi srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.1753842/sub057.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.sphere.reg Loading source data Reading curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/lh.pial_lgi Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (137924) Reverse Loop had 22553 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 146278, nTrgMulti = 17564, MnTrgMultiHits = 2.28405 nSrc121 = 99654, nSrcLost = 0, nSrcMulti = 38270, MnSrcMultiHits = 2.26655 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.1753842/sub057.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.1753842/sub057.1.mgh --o lh.pial_lgi.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to lh.pial_lgi.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.1753842 Wed 23 Nov 2022 03:17:55 PM CST mris_preproc done #-------------------------------------------- #@# Qdec Cache preproc rh pial_lgi fsaverage Wed 23 Nov 2022 03:17:55 PM CST /home/shenkang/Desktop/T1/RESULTS/sub057/surf mris_preproc --s sub057 --hemi rh --meas pial_lgi --target fsaverage --out rh.pial_lgi.fsaverage.mgh nsubjects = 1 tmpdir is ./tmp.mris_preproc.1754057 /home/shenkang/Desktop/T1/RESULTS/sub057/surf Log file is rh.pial_lgi.fsaverage.mris_preproc.log Wed 23 Nov 2022 03:17:55 PM CST setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf /opt/freesurfer/bin/mris_preproc --s sub057 --hemi rh --meas pial_lgi --target fsaverage --out rh.pial_lgi.fsaverage.mgh Linux shenkang-B560M-AORUS-ELITE 5.15.0-46-generic #49~20.04.1-Ubuntu SMP Thu Aug 4 19:15:44 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c tmpdir is ./tmp.mris_preproc.1754057 Src rh sphere.reg Trg rh sphere.reg --------------------------------------------------- #@# 1/1 sub057 Wed 23 Nov 2022 03:17:55 PM CST -------------- ----------------------- mri_surf2surf --srcsubject sub057 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.1754057/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.pial_lgi --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --srcsubject sub057 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.1754057/sub057.1.mgh --sval /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.pial_lgi --sfmt curv --noreshape --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = sub057 srcval = /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.pial_lgi srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.1754057/sub057.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.sphere.reg Loading source data Reading curvature file /home/shenkang/Desktop/T1/RESULTS/sub057/surf/rh.pial_lgi Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (136762) Reverse Loop had 23604 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 145808, nTrgMulti = 18034, MnTrgMultiHits = 2.30886 nSrc121 = 98143, nSrcLost = 0, nSrcMulti = 38619, MnSrcMultiHits = 2.31241 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.1754057/sub057.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.1754057/sub057.1.mgh --o rh.pial_lgi.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to rh.pial_lgi.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.1754057 Wed 23 Nov 2022 03:17:59 PM CST mris_preproc done #-------------------------------------------- #@# Qdec Cache surf2surf lh pial_lgi fwhm0 fsaverage Wed 23 Nov 2022 03:17:59 PM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.pial_lgi.fsaverage.mgh --tval lh.pial_lgi.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.pial_lgi.fsaverage.mgh --tval lh.pial_lgi.fwhm0.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.pial_lgi.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.pial_lgi.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label lh.cortex.label masking the input Saving target data Saving to lh.pial_lgi.fwhm0.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh pial_lgi fwhm5 fsaverage Wed 23 Nov 2022 03:18:01 PM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.pial_lgi.fsaverage.mgh --tval lh.pial_lgi.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.pial_lgi.fsaverage.mgh --tval lh.pial_lgi.fwhm5.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.pial_lgi.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.pial_lgi.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to lh.pial_lgi.fwhm5.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh pial_lgi fwhm10 fsaverage Wed 23 Nov 2022 03:18:04 PM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.pial_lgi.fsaverage.mgh --tval lh.pial_lgi.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.pial_lgi.fsaverage.mgh --tval lh.pial_lgi.fwhm10.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.pial_lgi.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.pial_lgi.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to lh.pial_lgi.fwhm10.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh pial_lgi fwhm15 fsaverage Wed 23 Nov 2022 03:18:07 PM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.pial_lgi.fsaverage.mgh --tval lh.pial_lgi.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.pial_lgi.fsaverage.mgh --tval lh.pial_lgi.fwhm15.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.pial_lgi.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.pial_lgi.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 165 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 165 Saving target data Saving to lh.pial_lgi.fwhm15.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh pial_lgi fwhm20 fsaverage Wed 23 Nov 2022 03:18:10 PM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.pial_lgi.fsaverage.mgh --tval lh.pial_lgi.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.pial_lgi.fsaverage.mgh --tval lh.pial_lgi.fwhm20.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.pial_lgi.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.pial_lgi.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to lh.pial_lgi.fwhm20.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf lh pial_lgi fwhm25 fsaverage Wed 23 Nov 2022 03:18:14 PM CST mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.pial_lgi.fsaverage.mgh --tval lh.pial_lgi.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.pial_lgi.fsaverage.mgh --tval lh.pial_lgi.fwhm25.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = lh.pial_lgi.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.pial_lgi.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to lh.pial_lgi.fwhm25.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh pial_lgi fwhm0 fsaverage Wed 23 Nov 2022 03:18:18 PM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.pial_lgi.fsaverage.mgh --tval rh.pial_lgi.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.pial_lgi.fsaverage.mgh --tval rh.pial_lgi.fwhm0.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.pial_lgi.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.pial_lgi.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label rh.cortex.label masking the input Saving target data Saving to rh.pial_lgi.fwhm0.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh pial_lgi fwhm5 fsaverage Wed 23 Nov 2022 03:18:20 PM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.pial_lgi.fsaverage.mgh --tval rh.pial_lgi.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.pial_lgi.fsaverage.mgh --tval rh.pial_lgi.fwhm5.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.pial_lgi.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.pial_lgi.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to rh.pial_lgi.fwhm5.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh pial_lgi fwhm10 fsaverage Wed 23 Nov 2022 03:18:24 PM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.pial_lgi.fsaverage.mgh --tval rh.pial_lgi.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.pial_lgi.fsaverage.mgh --tval rh.pial_lgi.fwhm10.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.pial_lgi.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.pial_lgi.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to rh.pial_lgi.fwhm10.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh pial_lgi fwhm15 fsaverage Wed 23 Nov 2022 03:18:27 PM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.pial_lgi.fsaverage.mgh --tval rh.pial_lgi.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.pial_lgi.fsaverage.mgh --tval rh.pial_lgi.fwhm15.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.pial_lgi.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.pial_lgi.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 166 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 166 Saving target data Saving to rh.pial_lgi.fwhm15.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh pial_lgi fwhm20 fsaverage Wed 23 Nov 2022 03:18:31 PM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.pial_lgi.fsaverage.mgh --tval rh.pial_lgi.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.pial_lgi.fsaverage.mgh --tval rh.pial_lgi.fwhm20.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.pial_lgi.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.pial_lgi.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to rh.pial_lgi.fwhm20.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache surf2surf rh pial_lgi fwhm25 fsaverage Wed 23 Nov 2022 03:18:35 PM CST mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.pial_lgi.fsaverage.mgh --tval rh.pial_lgi.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /home/shenkang/Desktop/T1/RESULTS cd /home/shenkang/Desktop/T1/RESULTS/sub057/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.pial_lgi.fsaverage.mgh --tval rh.pial_lgi.fwhm25.fsaverage.mgh --cortex sysname Linux hostname shenkang-B560M-AORUS-ELITE machine x86_64 user shenkang srcsubject = fsaverage srcval = rh.pial_lgi.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.pial_lgi.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /home/shenkang/Desktop/T1/RESULTS/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to rh.pial_lgi.fwhm25.fsaverage.mgh Started at Wed 23 Nov 2022 03:17:51 PM CST Ended at Wed 23 Nov 2022 03:18:39 PM CST #@#%# recon-all-run-time-hours 0.013 recon-all -s sub057 finished without error at Wed 23 Nov 2022 03:18:39 PM CST