On Feb 26, 2021, at 10:41 PM, Douglas N. Greve <dgreve@mgh.harvard.edu> wrote:

Not sure, the command line looks correct. Can you run it with -debug as the first flag? Capture the output in a file (don't take a picture).

On 2/24/2021 6:14 AM, 况况 wrote:

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hello,

 i downloaded dev version, input

 FREESURFER_HOME=/home/siying/sharefolder/freesurfer-linux-ubuntu18_x86_64-dev/freesurfer

export SUBJECTS_DIR=/home/siying/sharefolder/freesurfer-linux-ubuntu18_x86_64-dev/freesurfer/kuang_dev/kuang_dev_results

source $FREESURFER_HOME/SetUpFreeSurfer.sh

then run recon-all -s ch2 -i /home/siying/sharefolder/freesurfer-linux-ubuntu18_x86_64-dev/freesurfer/kuang_dev/kuang_dev_data/ch2/ch2.nii-all –qcache -parallel

, then and appeared 'ERROR: must specify a subject id', what should i do to solve it?

best wishes

liangfeng kuang

 

 

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