Thanks.<div><br></div><div>These are the output</div><div><div>[iMac-di-Stefano:Con28/SUBJECTS_DIR/surf] Stefano% mris_calc lh.area stats</div><div>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; Size &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; [ 126850 ]</div><div>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp;Min@(index) &nbsp; &nbsp; &nbsp; &nbsp;[ -0.322716 (56402) ]</div><div>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp;Max@(index) &nbsp; &nbsp; &nbsp; [ 12.367171 (123284) ]</div><div>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; Mean &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; [ 0.587518 ]</div><div>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp;Std &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; [ 0.402374 ]</div><div>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp;Sum &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; [ 74526.703125 ]</div><div>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; Prod &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; [ 0.000000 ]</div><div>[iMac-di-Stefano:Con28/SUBJECTS_DIR/surf] Stefano% mris_calc lh.area.pial stats</div><div>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; Size &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; [ 126355 ]</div><div>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp;Min@(index) &nbsp; &nbsp; &nbsp; &nbsp; [ 0.000000 (97676) ]</div><div>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp;Max@(index) &nbsp; &nbsp; &nbsp; [ 22.833410 (119901) ]</div><div>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; Mean &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; [ 0.785660 ]</div><div>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp;Std &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; [ 0.738523 ]</div><div>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp;Sum &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; [ 99272.054688 ]</div><div>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; Prod &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; [ 0.000000 ]</div><div><br></div><div>but I do not understand what's happen.</div><div><br></div><div>Stefano</div>
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----Messaggio originale----<br>Da: rudolph@nmr.mgh.harvard.edu<br>Data: 12-set-2013 14.49<br>A: &lt;stdp82@virgilio.it&gt;<br>Cc: &lt;freesurfer@nmr.mgh.harvard.edu&gt;<br>Ogg: Re: [Freesurfer] mris_calc erroe in recon-all<br><br>The error would indicate that the number of elements in 'lh.area' and <br>'lh.area.pial' are not the same. You can check this also with mris_calc:<br><br>mris_calc lh.area stats<br><br>mris_calc lh.area.pial stats<br><br>which will provide some basic statistical output, including the size <br>(i.e. number of elements) of each. The sizes have to match in order to add.<br><br>HTH<br>-=R<br><br>On 9/12/13 02:56 , stdp82@virgilio.it wrote:<br>&gt; Hi list,<br>&gt;<br>&gt; I have a problem during recon-all<br>&gt;<br>&gt; #@# Surf Volume lh Thu Sep 12 08:25:31 CEST 2013<br>&gt; /Applications/freesurfer/subjects/subject_prova/Con28/SUBJECTS_DIR/surf<br>&gt; \n mris_calc -o lh.area.mid lh.area add lh.area.pial \n<br>&gt;<br>&gt; mris_calc:<br>&gt; Sorry, but I seem to have encountered an error.<br>&gt; While checking on input filetype sizes,<br>&gt; I found a size mismatch, i.e. len(input1)!=len(input2)<br>&gt;<br>&gt; Darwin iMac-di-Stefano.local 12.4.0 Darwin Kernel Version 12.4.0: Wed <br>&gt; May&nbsp; 1 17:57:12 PDT 2013; root:xnu-2050.24.15~1/RELEASE_X86_64 x86_64<br>&gt;<br>&gt; recon-all -s SUBJECTS_DIR exited with ERRORS at Thu Sep 12 08:25:31 <br>&gt; CEST 2013<br>&gt;<br>&gt; For more details, see the log file <br>&gt; /Applications/freesurfer/subjects/subject_prova/Con28/SUBJECTS_DIR/scripts/recon-all.log<br>&gt; To report a problem, see <br>&gt; http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting<br>&gt;<br>&gt;<br>&gt; Thanks,<br>&gt;<br>&gt;<br>&gt;<br>&gt; Stefano<br>&gt;<br>&gt;<br>&gt; _______________________________________________<br>&gt; Freesurfer mailing list<br>&gt; Freesurfer@nmr.mgh.harvard.edu<br>&gt; https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer<br><br><br>-- <br>Rudolph Pienaar, M.Eng, D.Eng / email: rudolph@nmr.mgh.harvard.edu<br>MGH/MIT/HMS Athinoula A. Martinos Center for Biomedical Imaging<br>149 (2301) 13th Street, Charlestown, MA 02129 USA<br><br><br><br>The information in this e-mail is intended only for the person to whom it is<br>addressed. If you believe this e-mail was sent to you in error and the e-mail<br>contains patient information, please contact the Partners Compliance HelpLine at<br>http://www.partners.org/complianceline . If the e-mail was sent to you in error<br>but does not contain patient information, please contact the sender and properly<br>dispose of the e-mail.<br><br><br><br>
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