Nick,

I copy this file but there is the same problem. So I try to find the mistake.

In the file asegstats2table in $FREESURFER_HOME/bin, I do this modify:
in  def write_table(options, rows, cols, table)     (line 305)
I replace
r1c1 = 'Measure:%s' %( options.meas)
with this line
r1c1 = 'fsid '

and now the problem has solved and I can import aseg.volume in qdec.
Now I want to ask if I can do this or there will be implicated errors.

Thanks,
Anita di Iasio



2009/5/13 Nick Schmansky <nicks@nmr.mgh.harvard.edu>
Anita,

A required update to the aseg/aparcstats2table utilities was not
included in v4.3.0.  You can get it here:

http://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/fixes/stats2table.tar.gz

copy this file to your $FREESURFER_HOME/bin, and then type:

gunzip stats2table.tar.gz

Nick




On Tue, 2009-05-12 at 17:40 +0200, anita di iasio wrote:
> Hi all,
>
> version FreeSurfer 4.3.0
>
> Problem:
> when I run qdec and I generate Stats Data, I can't import aseg.volume
> Command line shows this error:
> ERROR: QdecDataTable::Load could not find column named 'fsid' or 'ID'
> in /home/anita/freesurfer/subjects/qdec/stats_tables//aseg.volume.stats.dat!
>
> The facts is:
> the first line of aseg.volume.stats.dat is    "Measure:volume    Left-
> Cerebral-White-Matter    Left-Cerebral-Cortex....." and happens the
> mentioned problem
> but if I change in     "fsid    Left-Cerebral-White-Matter    Left-
> Cerebral-Cortex    Left-Lateral-Ventricle    Left-Inf-Lat-Vent...."
> I can import the aseg.volume and all go right.
>
> Is it a bug?Can you fix it?
>
> Thanks all,
> Anita di Iasio
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