"mri_convert" just starts the man page for mri_convert.

I have been looking at other things and 3D view in FSL also crashes with a 2657 segmentation fault and a core dump. I think the problem is in the virtualized 3D driver or something like that.

It seems that CentOS 6.4 does have some problems with 3D.

I use the latest vboxadditions 4.2.16.

I dont think the error is Freesurfer. But ill dig deeper.

Thank you for your time.

Best regards

Rune

On Wed, Jul 10, 2013 at 4:29 PM, Z K <zkaufman@nmr.mgh.harvard.edu> wrote:

Rune,

I have not seen this error before. Can you please type mri_convert on the command line and tell me what, if any, output is produced.

-Zeke

On 07/10/2013 05:14 AM, Rune Frandsen wrote:
I have just installed Freesurfer and wanted to try tkmedit
I get a Segfault error and it asked me to write to this mail.

The .xdebug_tkmedit is

tkmedit started: Wed Jul 10 10:53:23 2013

/usr/local/freesurfer/tktools/tkmedit.bin

$Id: tkmedit.c,v 1.343 2011/03/01 01:41:22 nicks Exp $ $Name: stable5 $

Segfault
Creating main window
xDebug stack (length: 2)
01: main()
01: Creating main window
00:
00:

My system is a fresh install of CentOS 6.4 64bit installed in VirtualBox. The only other program installed is FSL. The base machine is a HP Envy dv6 i7 16GB with Win8 64bit.

Is this a known problem?

Best regards
Rune Frandsen (MD, phd student)
Danish Center for Sleep Medicine
runefrandsen@gmail.com

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