Run it for each subject using -f subject/stats/lh.lobesStrict.stats, then use aparcstats2table with -p lobesStrict to get a summary across all subjects


On 4/16/18 7:18 AM, Fernanda Hansen P. de Moraes wrote:
Douglas,

I'm already extracting the data with mris_anatomical_stats -a SUBJ225/label/lh.lobesStrict.annot -b SUBJ225 lh
But I would like to do it now for multiple subjects at once, as the data extraction. Righ now I'm just copying it to a table, one by one.

Thank you!

On Fri, Apr 13, 2018 at 8:17 PM Douglas Greve <dgreve@mgh.harvard.edu> wrote:

If you look in the recon-all.log file, you will find the call to mris_anatomical stats used to generate the aparc.stats files. Just modify it select your annotation and output stats file name


On 4/13/18 4:26 PM, Fernanda Hansen P. de Moraes wrote:
Good night,

I would like some help to extract mri_anatomical_stats with lobeStrict annot for multiple subjects in a table format, with the results for all subjects there. 
I've already tried aparcstats2table and I don't got how to insert the lobeStrict annot there.

Thank you very much,
Fernanda Moraes

--
Fernanda Hansen P. de Moraes
Física Médica | Instituto D'Or de Pesquisa e Ensino | Rede D'Or São Luiz


_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.
--
Fernanda Hansen P. de Moraes
Física Médica | Instituto D'Or de Pesquisa e Ensino | Rede D'Or São Luiz


_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer