Hello<br><br>Thanks for your previous responses. Those have been helpful.<br><br>I have been trying to use some ROIs generated in BrainVoyager(BV). I have converted the ROI text file of BV to Freesurfer label text file format, using a small perl script (attached as testperl.txt).<br>

I am also attaching the original BV ROI file and the changed FS label file for your reference. <br><br>My method seemed to work( no error), however all the ROIs , regardless of where they should be ( like frontal, MT etc) are landing up on the occipital area, including the occipital ROI itself. <br>

<br>The BV ROI data sent to me was generated in  Tal space, also, I have done manual Talairaching to  the same data in FS using tkregister2. So I assume both versions of the subject (BV and FS) are in same space. Am I right?<br>

<br>It would be great if you could suggest me where I must be going wrong. FYI, the BV processing has been done on a windows machine and sent to me. I work only on FS on Ubuntu.<br><br>I am also attaching pictures of frontal and an occipital ROI on the inflated brain. <br>
<br>Looking forward to some help.<br>
<br><br clear="all"><br>-- <br>Barnali Basu<br><br>Cell   : 425 638 2936<br>Home: 206 257 0174<br>