I'm trying to run a retinotopic analysis with the following commands:

mkanalysis-sess -analysis retino-lh -TR 2 -retinotopy 40 -paradigm rtopy.para -funcstem fmcpr.sm5.self -surface self lh -mcextreg -runlistfile retRuns -fwhm 0

selxavg3-sess -analysis retino-lh -s somesubject -df sessdir

and am getting the error:

>> >> >> >> >> >> >> /Applications/freesurfer/fsfast/toolbox/fast_selxavg3.m

>> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> $Id: fast_selxavg3.m,v 1.88.2.2 2010/07/16 15:31:24 greve Exp $

outtop = /Users/jwebst/UW/Psych/VisCog/techAdmin/anatV1LGN/pilotData/RET/data

Extension format = nii

ERROR: cannot determine format of /Users/jwebst/UW/Psych/VisCog/techAdmin/anatV1LGN/pilotData/RET/data/nsLGHa/bold/001/fmcpr.sm5.self

ERROR: attempting to read /Users/jwebst/UW/Psych/VisCog/techAdmin/anatV1LGN/pilotData/RET/data/nsLGHa/bold/001/fmcpr.sm5.self

------------------------------------------

ERROR: fast_selxavg3() failed\n

It looks like this might have something to do with analysis.info

...
funcstem fmcpr.sm5.self
...
RawSpace surface self lh
...

Should the funcstem have gotten '.lh' or should this be worked out by getana or selxavg3-sess?

Thanks,

~Jason