Do you have read permission to the file? Also, you can convert straight to mgz, not need to use nii as an intermediate.
doug

On 3/15/13 5:13 AM, Valtina Pouegue wrote:

Hi,

I have a problem of conversion. I would like to convert mnc file to mgz. But I think I shoul first convert mnc to nii then nii to mgz. ,

so I try the command mri_convert and I have this error;

-------------

[esther@m3012-04 ~]$ mri_convert $SUBJECTS_DIR/Patient1/fichierMnc.mnc Folder1.nii.gz

mri_convert /home/esther/Freesufer/freesurfer/subjects/Patient1/fichierMnc.mnc Folder1.nii.gz

$Id: mri_convert.c,v 1.179.2.7 2012/09/05 21:55:16 mreuter Exp $

reading from /home/esther/Freesufer/freesurfer/subjects/Patient1/fichierMnc.mnc...

mincRead(): can't find file /home/esther/Freesufer/freesurfer/subjects/Patient1/fichierMnc.mnc

[esther@m3012-04 ~]$

--------------------

I look up, and the file is at the rith place.... Could you help me..

Thanks

VP
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