Hi,

I am interested in looking at between-group differences in in LGI on Qdec (I will look at surface area as well later). I have a question regarding the smoothing stage. My recon-all for all subjects has completed, and I have LGI values for each subject. For smoothing, I was going to run the following command line:

Recon-all –s <subjid> -qcache

However, I saw in an archive post someone mentioning running the following line instead:

recon-all -s <subjid> -qcache -measure pial_lgi

Will you please tell me which command line I have to run?

Thanks so much,

Avi

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